##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088312_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 474008 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.946467148233786 31.0 31.0 33.0 28.0 34.0 2 31.29106681743768 31.0 31.0 34.0 28.0 34.0 3 31.36103610065653 31.0 31.0 34.0 28.0 34.0 4 35.24681861909504 35.0 35.0 37.0 33.0 37.0 5 34.952806703684324 35.0 35.0 37.0 32.0 37.0 6 35.04293809387183 36.0 35.0 37.0 32.0 37.0 7 34.867546539298914 35.0 35.0 37.0 32.0 37.0 8 34.927395740156285 36.0 35.0 37.0 32.0 37.0 9 36.41074834180014 38.0 35.0 39.0 32.0 39.0 10 36.19225835850872 38.0 35.0 39.0 32.0 39.0 11 36.324697051526556 38.0 35.0 39.0 32.0 39.0 12 36.05927115154174 38.0 35.0 39.0 31.0 39.0 13 36.14470641845707 38.0 35.0 39.0 31.0 39.0 14 36.927606707059795 39.0 36.0 40.0 31.0 41.0 15 37.09148790737709 39.0 36.0 40.0 31.0 41.0 16 37.079935359740766 39.0 36.0 40.0 31.0 41.0 17 37.15303117246966 39.0 36.0 40.0 31.0 41.0 18 37.15986017113635 39.0 36.0 40.0 31.0 41.0 19 37.26026353985587 39.0 36.0 40.0 31.0 41.0 20 37.25292611095171 39.0 36.0 40.0 31.0 41.0 21 37.169982363166866 39.0 36.0 40.0 31.0 41.0 22 37.08948161212469 39.0 36.0 40.0 31.0 41.0 23 36.972152368736396 39.0 36.0 40.0 31.0 41.0 24 36.88678883056826 39.0 35.0 40.0 31.0 41.0 25 36.787811598116484 38.0 35.0 40.0 30.0 41.0 26 36.56951992371437 38.0 35.0 40.0 30.0 41.0 27 36.43993983223912 38.0 35.0 40.0 30.0 41.0 28 36.27230764037738 38.0 35.0 40.0 30.0 41.0 29 36.075445984034026 38.0 35.0 40.0 30.0 41.0 30 35.84430642520801 38.0 34.0 40.0 29.0 41.0 31 35.650588175726995 38.0 34.0 40.0 28.0 41.0 32 35.519721186140316 38.0 34.0 40.0 28.0 41.0 33 35.35314804813421 38.0 34.0 40.0 27.0 41.0 34 35.50231008759346 38.0 34.0 40.0 27.0 41.0 35 35.427429494860846 38.0 34.0 40.0 27.0 41.0 36 35.38559264822535 38.0 34.0 40.0 27.0 41.0 37 35.28056488498085 38.0 34.0 40.0 27.0 41.0 38 35.261634824728695 38.0 34.0 40.0 26.0 41.0 39 35.179323977654384 38.0 34.0 40.0 25.0 41.0 40 34.99786712460549 38.0 33.0 40.0 25.0 41.0 41 34.89055669946499 38.0 33.0 40.0 24.0 41.0 42 34.744571821572634 38.0 33.0 40.0 24.0 41.0 43 34.3782974127019 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 6.0 17 8.0 18 29.0 19 68.0 20 146.0 21 339.0 22 633.0 23 1052.0 24 1744.0 25 2840.0 26 4259.0 27 6277.0 28 9033.0 29 12268.0 30 15505.0 31 19724.0 32 24131.0 33 29318.0 34 35364.0 35 42471.0 36 52032.0 37 65518.0 38 78823.0 39 72419.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.83202815142361 22.625567500970448 14.580344635533576 22.962059712072367 2 18.06045467587045 23.910566910263118 36.288206106226056 21.740772307640377 3 19.249675110968592 25.45146917351606 33.39901436262679 21.899841352888558 4 13.341336011206561 16.57904507940794 37.306332382575825 32.77328652680968 5 11.97574724477224 38.517493375639226 36.042218696730856 13.464540682857674 6 31.01972962481646 38.09408280029029 14.130141263438592 16.756046311454657 7 24.41477780965722 34.225160756780475 22.43211085044978 18.927950583112523 8 25.6930262780375 35.14307775396196 20.034682958937402 19.129213009063136 9 23.886094749455705 14.915360078310917 23.02978008809978 38.1687650841336 10 15.689608614200603 27.719785320078987 34.97493713186275 21.615668933857656 11 31.96169684899833 22.791809420938044 24.774898313952505 20.47159541611112 12 20.525391976506725 27.285193498843903 32.02266628411335 20.166748240536027 13 30.767413208215892 21.765455435351303 27.503966177786026 19.963165178646776 14 19.80662773624074 23.703608377917675 28.857529830720157 27.632234055121437 15 21.590141938532685 30.20539737725946 26.580142107306205 21.624318576901654 16 21.07622656157702 29.387056758535724 27.48202561982076 22.054691060066496 17 20.66041079475452 27.39721692460887 27.846154495282782 24.096217785353836 18 22.322197093719936 26.121078125263708 30.83281294830467 20.723911832711682 19 21.70722856998194 25.408853859006598 32.10852981384281 20.775387757168655 20 22.961848745168858 24.771733810399823 32.068235135271976 20.19818230915934 21 21.797733371588667 25.74028286442423 32.39017063003156 20.071813133955548 22 20.255987240721677 25.994919916963426 31.904313851243018 21.84477899107188 23 21.408077500801674 26.224029974177647 32.801767058783824 19.566125466236855 24 21.262088403571248 26.189220435098143 30.6410440330121 21.90764712831851 25 20.984666925452736 26.659254696123273 31.597357006632798 20.758721371791193 26 20.86884609542455 27.600378052691095 31.260653828627365 20.27012202325699 27 19.58701118968456 27.497004269970127 31.080277126124457 21.835707414220856 28 20.32602825268772 26.89448279353935 31.174157398187376 21.60533155558556 29 20.588893014463892 26.561787986700647 30.43450743447368 22.414811564361784 30 20.597331690604378 26.985831462760125 32.30114259674942 20.11569424988608 31 21.801741742755397 26.535628090665135 31.915073163322138 19.74755700325733 32 21.026438372348146 26.610521341411957 30.782180891461746 21.580859394778148 33 20.668427537087982 26.509257227726113 31.528792762991344 21.293522472194564 34 19.760847918178595 27.297218612344093 32.33278763227625 20.60914583720106 35 19.356846297952774 29.352247219456213 30.824585239067698 20.466321243523318 36 21.731067830078818 27.13329732831513 30.52543416988743 20.61020067171862 37 20.85323454456465 27.89066851192385 30.487249160351727 20.768847783159778 38 20.646697946026226 26.30651803345091 31.794400094513176 21.25238392600969 39 20.242907292703922 25.86137786704022 32.571602167052035 21.324112673203828 40 18.89060944119087 26.336686300653156 32.2937587551265 22.478945503029486 41 20.60893487029755 25.60062277429917 32.0530455182191 21.737396837184182 42 19.05474169212334 27.79868694199254 31.50242190005232 21.6441494658318 43 19.613171085720072 27.796999206764443 30.608766096774737 21.981063610740748 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 33.0 1 50.0 2 67.0 3 201.0 4 335.0 5 335.0 6 542.0 7 749.0 8 832.5 9 916.0 10 1386.0 11 1856.0 12 1856.0 13 3410.0 14 4964.0 15 8285.0 16 11606.0 17 11302.0 18 10998.0 19 10998.0 20 11803.0 21 12608.0 22 10770.0 23 8932.0 24 9838.5 25 10745.0 26 10745.0 27 11879.5 28 13014.0 29 13936.0 30 14858.0 31 16133.5 32 17409.0 33 17409.0 34 18917.5 35 20426.0 36 21987.5 37 23549.0 38 24533.5 39 25518.0 40 25518.0 41 26158.5 42 26799.0 43 27563.0 44 28327.0 45 30042.5 46 31758.0 47 31758.0 48 41770.0 49 51782.0 50 46964.0 51 42146.0 52 37538.5 53 32931.0 54 32931.0 55 28752.5 56 24574.0 57 20256.5 58 15939.0 59 14081.0 60 12223.0 61 12223.0 62 10768.0 63 9313.0 64 7985.0 65 6657.0 66 5645.0 67 4633.0 68 4633.0 69 3877.5 70 3122.0 71 2650.5 72 2179.0 73 1751.5 74 1324.0 75 1324.0 76 1061.5 77 799.0 78 601.5 79 404.0 80 333.5 81 263.0 82 263.0 83 192.0 84 121.0 85 95.5 86 70.0 87 51.5 88 33.0 89 33.0 90 26.0 91 19.0 92 13.0 93 7.0 94 4.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 474008.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.149709262495534 #Duplication Level Percentage of deduplicated Percentage of total 1 86.33954438254644 54.52317125614135 2 8.360260849319038 10.558960839862426 3 2.210643628938876 4.188045073514343 4 0.923176865105472 2.3319340251709044 5 0.4761640127573847 1.5034809483446028 6 0.3175840894339627 1.2033205748489475 7 0.2091669768202021 0.9246183641457634 8 0.15295517018657634 0.7727259621982255 9 0.13002175551655842 0.7389752452802945 >10 0.7857464846687852 9.260704068594054 >50 0.054565134018113456 2.39153512624299 >100 0.03314078681806374 4.664265084621229 >500 0.003682309646451527 1.577444981029895 >1k 0.002678043379237474 3.1280425334091873 >5k 6.695108448093685E-4 2.2327759165957852 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5319 1.1221329597812695 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5243 1.106099475114344 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4435 0.935638217076505 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1759 0.37109078327791933 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1506 0.3177161566893386 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1451 0.30611297699616885 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1449 0.3056910431891445 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 1440 0.3037923410575349 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 1396 0.2945097973029991 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1361 0.2871259556800729 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 988 0.20843530067003088 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 776 0.16371031712544937 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 767 0.16181161499383975 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 757 0.159701945958718 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 723 0.15252907123930398 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 674 0.14219169296720732 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 632 0.13333108301969587 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 553 0.11666469764223389 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 544 0.11476599551062429 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 540 0.11392212789657558 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 508 0.10717118698418593 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 484 0.10210798129989367 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 482 0.10168604749286933 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 2.10966903512177E-4 0.0 12 0.0 0.0 0.0 0.0014767683245852392 0.0 13 0.0 0.0 0.0 0.0018987021316095932 0.0 14 0.0 0.0 0.0 0.0018987021316095932 0.0 15 0.0 0.0 0.0 0.002320635938633947 0.0 16 0.0 0.0 0.0 0.002742569745658301 0.0 17 0.0 0.0 0.0 0.004219338070243541 0.0 18 0.0 0.0 0.0 0.005063205684292248 0.0 19 0.0 0.0 0.0 0.006118040201853133 0.0 20 0.0 0.0 0.0 0.009493510658047965 0.0 21 0.0 0.0 0.0 0.017932186798535046 0.0 22 0.0 0.0 0.0 0.025737962228485595 0.0 23 0.0 0.0 0.0 0.03291083694789961 0.0 24 0.0 0.0 0.0 0.04177144689541105 0.0 25 0.0 0.0 0.0 0.05021012303589813 0.0 26 0.0 0.0 0.0 0.06413393866770181 0.0 27 0.0 0.0 0.0 0.15527164098496227 0.0 28 0.0 0.0 0.0 0.25801252299539246 0.0 29 0.0 0.0 0.0 0.37657592276923596 0.0 30 0.0 0.0 0.0 0.5807918853690233 0.0 31 0.0 0.0 0.0 0.8434456802416836 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGGGTC 35 2.3853698E-5 31.714285 5 GGTATCA 1405 0.0 28.967972 1 CGGGTCT 40 5.932878E-5 27.750002 6 ACCGTCG 35 8.8616763E-4 26.42857 23 GTGGCGT 40 0.001929522 23.125002 6 CCGTCGG 40 0.001929522 23.125002 24 TCACGTA 40 0.001929522 23.125002 25 CAGACCG 65 2.6773268E-6 22.76923 20 GGCGTGA 50 2.698858E-4 22.199999 8 GACCGTC 45 0.0038225416 20.555555 22 TACGGGT 90 9.4487405E-8 20.555555 4 TACCTGC 45 0.0038225416 20.555555 6 CTAGCCG 45 0.0038225416 20.555555 10 TACTCCG 55 5.13697E-4 20.181818 5 CTCTAGG 70 1.2172804E-4 18.5 1 CTAATAC 80 1.6134063E-5 18.5 3 CTCCTAA 50 0.0070289345 18.499998 1 GCTCGAG 50 0.0070289345 18.499998 29 GCGTCGG 50 0.0070289345 18.499998 9 TAGCTCG 50 0.0070289345 18.499998 27 >>END_MODULE