##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088311_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 502402 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.963768058248174 31.0 31.0 33.0 28.0 34.0 2 31.3013124947751 31.0 31.0 34.0 28.0 34.0 3 31.388380221416316 31.0 31.0 34.0 28.0 34.0 4 35.2757015298506 37.0 35.0 37.0 33.0 37.0 5 35.008706175532744 35.0 35.0 37.0 32.0 37.0 6 35.05010330372889 36.0 35.0 37.0 32.0 37.0 7 34.877054629559595 36.0 35.0 37.0 32.0 37.0 8 34.92022125708098 36.0 35.0 37.0 32.0 37.0 9 36.43860892273518 38.0 35.0 39.0 32.0 39.0 10 36.21114167539142 38.0 35.0 39.0 32.0 39.0 11 36.32384226177444 38.0 35.0 39.0 32.0 39.0 12 36.0744045604914 38.0 35.0 39.0 30.0 39.0 13 36.16217889259995 38.0 35.0 39.0 31.0 39.0 14 37.015654794367855 39.0 36.0 40.0 31.0 41.0 15 37.155240225954515 39.0 36.0 40.0 31.0 41.0 16 37.13405997587589 39.0 36.0 40.0 31.0 41.0 17 37.17302279847612 39.0 36.0 40.0 31.0 41.0 18 37.17405782620292 39.0 36.0 40.0 31.0 41.0 19 37.26523779762023 39.0 36.0 40.0 31.0 41.0 20 37.24620523007472 39.0 36.0 40.0 31.0 41.0 21 37.176876286320514 39.0 36.0 40.0 31.0 41.0 22 37.09554898268717 39.0 36.0 40.0 31.0 41.0 23 36.98508166766852 39.0 36.0 40.0 31.0 41.0 24 36.90339011389286 39.0 35.0 40.0 31.0 41.0 25 36.77012830362936 39.0 35.0 40.0 30.0 41.0 26 36.53540989088419 38.0 35.0 40.0 30.0 41.0 27 36.41245257781617 38.0 35.0 40.0 30.0 41.0 28 36.264254521279774 38.0 35.0 40.0 30.0 41.0 29 36.05699619030179 38.0 35.0 40.0 29.0 41.0 30 35.86277522780562 38.0 34.0 40.0 29.0 41.0 31 35.67102240835028 38.0 34.0 40.0 28.0 41.0 32 35.53319254302332 38.0 34.0 40.0 27.0 41.0 33 35.363290751231084 38.0 34.0 40.0 27.0 41.0 34 35.539026516614186 38.0 34.0 40.0 27.0 41.0 35 35.499325241539644 38.0 34.0 40.0 27.0 41.0 36 35.443527294875416 38.0 34.0 40.0 27.0 41.0 37 35.3557987428394 38.0 34.0 40.0 27.0 41.0 38 35.33205082782314 38.0 34.0 40.0 26.0 41.0 39 35.24105596713389 38.0 34.0 40.0 26.0 41.0 40 35.07025847827039 38.0 34.0 40.0 25.0 41.0 41 34.97381379851195 38.0 33.0 40.0 24.0 41.0 42 34.863684857942445 38.0 33.0 40.0 24.0 41.0 43 34.47922978013622 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 3.0 17 6.0 18 22.0 19 88.0 20 184.0 21 355.0 22 665.0 23 1181.0 24 2018.0 25 3194.0 26 4823.0 27 6661.0 28 9643.0 29 12971.0 30 16574.0 31 20416.0 32 25072.0 33 30352.0 34 36755.0 35 44044.0 36 53723.0 37 67856.0 38 83855.0 39 81940.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.79542278892202 22.789917237590615 14.203964156193646 23.210695817293722 2 18.02003176738946 23.79011230050836 35.93974546279672 22.250110469305458 3 19.139255018889255 25.535129239135195 32.95627804029442 22.369337701681125 4 13.514874542696884 17.114780594026296 37.26358573413322 32.10675912914359 5 12.351861656601686 38.655498982886215 35.57629149565487 13.416347864857226 6 30.980768388660874 38.34240309552908 14.804678325325138 15.87215019048491 7 24.67744953244613 33.9530893587207 23.0277745709611 18.34168653787206 8 25.446554750976308 35.25682620690204 20.16970473843655 19.126914303685098 9 24.245524500300554 14.908579185592414 23.001699833997478 37.84419648010955 10 15.573186412474474 28.160118789336032 35.00244823866147 21.264246559528026 11 32.04824025382065 23.51961178498493 24.464074585690344 19.968073375504076 12 20.160349680136626 27.634643174191186 32.002261137495466 20.20274600817672 13 30.015405989625837 22.217666330946134 27.24093455041978 20.525993129008242 14 19.94637760199999 23.67665733814754 28.949924562402217 27.42704049745025 15 21.96726923857787 30.354974701533834 26.139028108964535 21.53872795092376 16 21.053061094502013 29.245703639714808 27.809403624985567 21.89183164079761 17 20.781764403804125 27.90355133936569 28.260038773730994 23.054645483099193 18 21.8376917289342 26.973817779387822 30.461463131118112 20.727027360559873 19 21.706521868941607 26.35558775641817 31.717031381244503 20.220858993395726 20 22.312212132913483 25.93222160739806 31.281523560813852 20.474042698874605 21 21.105210568429268 26.821151189684755 31.895573664117578 20.1780645777684 22 20.379894984494488 27.11354652250588 31.352383151340955 21.15417534165867 23 21.22364162563047 27.043881194740464 31.79844029283323 19.934036886795834 24 21.149995421992745 26.98058526837075 30.516598261949596 21.352821047686913 25 21.031763408585157 27.406538986707858 31.08685873065792 20.474838874049066 26 20.64044331033714 28.050843746641135 30.90035469604022 20.4083582469815 27 19.957723098236073 27.8484162085342 30.732361734228764 21.46149895900096 28 20.31480766398223 27.63703169971457 30.833077893798194 21.215082742505007 29 20.59167758090135 27.589261189246855 30.350993825661522 21.46806740419027 30 20.762855243410655 27.79089255217933 31.399755574221437 20.046496630188575 31 21.423879682007634 27.61434070724241 31.051428935394366 19.91035067535559 32 20.86715419126516 27.644396320078346 30.59502151663409 20.893427972022405 33 20.6360643468776 27.545869642238685 30.90274322156361 20.915322789320108 34 20.121138052794375 27.716450173367146 31.569738973969052 20.592672799869426 35 19.775996114665148 29.19773408545348 30.728181814562838 20.29808798531853 36 21.36118088701876 27.715454954399064 30.366519241563527 20.556844917018644 37 20.751111659587345 28.06039784873468 30.451510941437338 20.736979550240644 38 20.483795844761765 27.153355281228976 31.16886477362749 21.193984100381766 39 20.092674790307363 26.94216981620296 32.023757867205944 20.941397526283733 40 19.317797301762337 27.03173952332992 31.702700228104185 21.947762946803557 41 20.284553007352677 26.349815486403315 31.848798372617942 21.516833133626058 42 19.327550447649493 27.83448314298112 31.198323255082585 21.639643154286805 43 19.657366013670327 27.87628233964037 30.459074605594722 22.007277041094582 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 43.0 1 64.0 2 85.0 3 224.5 4 364.0 5 364.0 6 589.0 7 814.0 8 900.0 9 986.0 10 1557.0 11 2128.0 12 2128.0 13 3716.5 14 5305.0 15 8375.5 16 11446.0 17 11262.5 18 11079.0 19 11079.0 20 11942.5 21 12806.0 22 11300.0 23 9794.0 24 11205.0 25 12616.0 26 12616.0 27 13814.0 28 15012.0 29 15946.5 30 16881.0 31 18493.5 32 20106.0 33 20106.0 34 21902.0 35 23698.0 36 25636.5 37 27575.0 38 28563.0 39 29551.0 40 29551.0 41 29813.0 42 30075.0 43 30827.0 44 31579.0 45 32687.0 46 33795.0 47 33795.0 48 40213.0 49 46631.0 50 43011.5 51 39392.0 52 35106.0 53 30820.0 54 30820.0 55 27298.5 56 23777.0 57 20668.0 58 17559.0 59 15862.0 60 14165.0 61 14165.0 62 12335.0 63 10505.0 64 9205.5 65 7906.0 66 6715.5 67 5525.0 68 5525.0 69 4652.5 70 3780.0 71 3221.5 72 2663.0 73 2233.0 74 1803.0 75 1803.0 76 1435.0 77 1067.0 78 791.0 79 515.0 80 394.5 81 274.0 82 274.0 83 209.0 84 144.0 85 117.0 86 90.0 87 56.5 88 23.0 89 23.0 90 20.0 91 17.0 92 11.5 93 6.0 94 3.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 502402.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 63.6360191963137 #Duplication Level Percentage of deduplicated Percentage of total 1 84.88385008584997 54.016703135201624 2 9.268914956803926 11.796737002403475 3 2.449116023496213 4.675559828556135 4 1.0353804222847982 2.635499537120112 5 0.5827998510963722 1.8543531255988757 6 0.3300727444519593 1.2602709301274895 7 0.2369569546585926 1.0555298120747962 8 0.16560014961193525 0.8430507439694026 9 0.13634028029920348 0.7808537424915811 >10 0.8126923538917493 9.65671349477923 >50 0.060718403150303114 2.661494555583732 >100 0.03286305260439068 4.028191766008141 >500 0.0031298145337514908 1.484206924118302 >1k 0.0015649072668757454 3.250835401967113 >5k 0.0 0.0 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 4794 0.9542159465925694 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 4732 0.94187523138841 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 3960 0.7882134227172664 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1769 0.3521084709057687 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 1067 0.21237972778770783 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 992 0.1974514432665475 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 978 0.1946648301559309 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 937 0.1865040346176966 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 898 0.1787413266666932 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 730 0.14530196933929404 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 674 0.13415551689682764 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 648 0.12898037826282538 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 555 0.11046930545658656 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 538 0.10708556096512355 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.9904379361547128E-4 0.0 10 0.0 0.0 0.0 1.9904379361547128E-4 0.0 11 1.9904379361547128E-4 0.0 0.0 1.9904379361547128E-4 0.0 12 1.9904379361547128E-4 0.0 0.0 3.9808758723094257E-4 0.0 13 1.9904379361547128E-4 0.0 0.0 3.9808758723094257E-4 0.0 14 1.9904379361547128E-4 0.0 0.0 5.971313808464139E-4 0.0 15 1.9904379361547128E-4 0.0 0.0 5.971313808464139E-4 0.0 16 1.9904379361547128E-4 0.0 0.0 5.971313808464139E-4 0.0 17 1.9904379361547128E-4 0.0 0.0 9.952189680773563E-4 0.0 18 1.9904379361547128E-4 0.0 0.0 0.0011942627616928277 0.0 19 1.9904379361547128E-4 0.0 0.0 0.0017913941425392415 0.0 20 1.9904379361547128E-4 0.0 0.0 0.0027866131106165978 0.0 21 1.9904379361547128E-4 0.0 0.0 0.004777051046771311 0.0 22 1.9904379361547128E-4 0.0 0.0 0.009156014506311679 0.0 23 1.9904379361547128E-4 0.0 0.0 0.011146452442466391 0.0 24 1.9904379361547128E-4 0.0 0.0 0.018112985219007886 0.0 25 1.9904379361547128E-4 0.0 0.0 0.02189481729770184 0.0 26 1.9904379361547128E-4 0.0 0.0 0.030254656629551634 0.0 27 1.9904379361547128E-4 0.0 0.0 0.08956970712696208 0.0 28 1.9904379361547128E-4 0.0 0.0 0.1753575821752302 0.0 29 1.9904379361547128E-4 0.0 0.0 0.2708986031106564 0.0 30 1.9904379361547128E-4 0.0 0.0 0.4309298131774953 0.0 31 1.9904379361547128E-4 0.0 0.0 0.6620196575650574 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CACGACT 30 3.5966208E-4 30.833332 4 ACGCTAT 25 0.005493435 29.6 32 GGTATCA 1150 0.0 27.508696 1 CTATGCA 45 0.0038228563 20.555555 4 GGATAGG 45 0.0038228563 20.555555 1 ATTGGAC 90 9.451651E-8 20.555555 3 GTGACCC 55 5.137557E-4 20.181818 15 TACCGAC 55 5.137557E-4 20.181818 7 CTAATAC 95 1.671433E-7 19.473684 3 GTATTGG 140 9.276846E-11 18.5 1 TAGGGTG 50 0.007029505 18.5 5 GTATAGA 50 0.007029505 18.5 1 TAGGCTA 50 0.007029505 18.5 4 TGTACTG 130 6.9303496E-10 18.5 5 TACTGGT 110 7.7861114E-7 16.818182 7 GTATCAA 1920 0.0 16.380207 2 TTGGACC 170 8.367351E-11 16.32353 4 AATACTG 125 1.6521517E-7 16.279999 5 GTCCAGT 70 0.0025897704 15.857143 1 TGATCAA 85 5.356689E-4 15.235294 10 >>END_MODULE