##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088309_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3098683 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.9193557391963 31.0 31.0 33.0 28.0 34.0 2 31.235312550525496 31.0 31.0 34.0 28.0 34.0 3 31.281826505002286 31.0 31.0 34.0 28.0 34.0 4 35.176631168790095 35.0 35.0 37.0 33.0 37.0 5 34.9509197939899 35.0 35.0 37.0 32.0 37.0 6 35.012556302145136 36.0 35.0 37.0 32.0 37.0 7 34.81464802950156 35.0 35.0 37.0 32.0 37.0 8 34.88867076754867 36.0 35.0 37.0 32.0 37.0 9 36.33370757834861 38.0 35.0 39.0 32.0 39.0 10 36.15876583697009 38.0 35.0 39.0 31.0 39.0 11 36.2478578802672 38.0 35.0 39.0 32.0 39.0 12 36.01325046802141 38.0 35.0 39.0 30.0 39.0 13 36.086247609064884 38.0 35.0 39.0 31.0 39.0 14 36.86284527975272 38.0 36.0 40.0 31.0 41.0 15 36.988289541072774 38.0 36.0 40.0 31.0 41.0 16 36.947558688642886 38.0 36.0 40.0 31.0 41.0 17 37.07306329818184 39.0 36.0 40.0 31.0 41.0 18 37.09169927998443 39.0 36.0 40.0 31.0 41.0 19 37.19314140878561 39.0 36.0 40.0 31.0 41.0 20 37.18136124282477 39.0 36.0 40.0 31.0 41.0 21 37.10485196452816 39.0 36.0 40.0 31.0 41.0 22 37.038493127564195 39.0 36.0 40.0 31.0 41.0 23 36.90495768686245 39.0 35.0 40.0 31.0 41.0 24 36.81825891838565 39.0 35.0 40.0 30.0 41.0 25 36.68042068194778 38.0 35.0 40.0 30.0 41.0 26 36.42953925909814 38.0 35.0 40.0 30.0 41.0 27 36.309732231402826 38.0 35.0 40.0 30.0 41.0 28 36.120802934666116 38.0 35.0 40.0 30.0 41.0 29 35.893117172682715 38.0 34.0 40.0 29.0 41.0 30 35.64707425703113 38.0 34.0 40.0 28.0 41.0 31 35.34693900602288 38.0 34.0 40.0 27.0 41.0 32 35.22706485303595 37.0 34.0 40.0 27.0 41.0 33 35.01996945153796 37.0 33.0 40.0 26.0 41.0 34 35.13021790225073 38.0 33.0 40.0 27.0 41.0 35 35.02278645476159 38.0 33.0 40.0 26.0 41.0 36 34.93201918363382 38.0 33.0 40.0 25.0 41.0 37 34.78934082640915 38.0 33.0 40.0 25.0 41.0 38 34.704003281394066 38.0 33.0 40.0 24.0 41.0 39 34.56599368183193 38.0 33.0 40.0 24.0 41.0 40 34.337855792283364 38.0 33.0 40.0 23.0 41.0 41 34.17116013480566 38.0 33.0 40.0 21.0 41.0 42 33.963459960247626 37.0 33.0 40.0 21.0 41.0 43 33.56941223093811 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 4.0 14 6.0 15 9.0 16 39.0 17 108.0 18 291.0 19 648.0 20 1488.0 21 2917.0 22 5211.0 23 8973.0 24 14620.0 25 22663.0 26 34068.0 27 48817.0 28 67608.0 29 88845.0 30 112455.0 31 135164.0 32 162637.0 33 194192.0 34 230871.0 35 271263.0 36 334387.0 37 424612.0 38 489470.0 39 447316.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.52928292439078 22.542383328659305 14.901976097587266 22.026357649362648 2 18.42795794213219 24.110081605636978 36.154940663501236 21.3070197887296 3 19.553242458166906 25.198350395958542 34.33203719128417 20.916369954590387 4 12.901126059038631 16.2882101847785 36.790468724938954 34.020195031243915 5 11.391484704953685 39.072696368102186 35.75238254445517 13.783436382488947 6 30.966058806273505 37.51093609769053 13.101243334668307 18.42176176136765 7 23.81963563229927 35.15493517729952 21.574940063246224 19.450489127154988 8 26.43665066739644 34.32693825086335 19.420024571729343 19.816386510010865 9 23.45644907852788 14.51168125297102 23.909673884033957 38.122195784467145 10 15.984855501514675 27.5679377335468 34.28011190560635 22.167094859332174 11 31.192961654999884 22.37534462221531 25.54440063730301 20.8872930854818 12 21.24260532619826 27.551575943715445 31.583546945589465 19.622271784496835 13 31.832685047163583 21.3747259722921 28.253390230623783 18.53919874992053 14 19.74961620791801 23.75631841011165 29.386549059713435 27.10751632225691 15 20.859023010743595 29.858911027684986 28.13027340970341 21.151792551868002 16 20.38617696614981 29.16364791106415 28.51059627590173 21.939578846884306 17 20.37933534988897 26.699149283744095 27.85409156083407 25.06742380553287 18 22.71113243916851 24.898932869222183 32.158726788122564 20.23120790348674 19 21.626349000526996 23.975508304657172 33.657815271842914 20.74032742297292 20 23.09116485939349 23.256009085150044 33.884944022993 19.76788203246347 21 21.697121002696953 24.364641365380066 34.70638977914165 19.23184785278133 22 19.14858667375785 24.92084540432177 33.987955528203436 21.942612393716942 23 21.201007008461335 25.2256845892271 35.47933105774292 18.093977344568643 24 20.97065107982972 24.969672599617322 31.987202304979245 22.07247401557371 25 20.38395021368756 25.979585520687337 33.52395194990904 20.112512315716064 26 20.28148732864898 26.95335405396422 33.152181104036785 19.612977513350028 27 18.343147717917578 27.203202134584277 32.70331298813076 21.750337159367383 28 19.515290850984112 26.11361020149528 32.82323490334442 21.547864044176187 29 19.84594745574168 25.999239031549852 31.60574992666239 22.549063586046074 30 20.25373360230782 26.22685185932217 34.193623549101346 19.32579098926867 31 21.77095882347436 25.749810484002396 33.68347133282107 18.79575935970217 32 20.766854821871096 25.945829244230534 31.947572565506054 21.339743368392313 33 20.196483473785477 25.865569340264884 33.068145402417734 20.86980178353191 34 18.811669344686113 27.126685756497192 34.03036064031074 20.031284258505952 35 18.32433327320026 30.054316624191635 31.949379784895708 19.671970317712393 36 21.80206881439631 26.735325943312045 31.45807428510758 20.00453095718407 37 20.633378761235015 28.12133412807957 31.142746773387277 20.102540337298137 38 20.311435535677578 25.75726526398473 33.04829826090633 20.883000939431366 39 19.74280686343198 25.47088553427375 33.75143569058209 21.03487191171217 40 17.862750078017015 26.352356791578874 33.20275097517236 22.582142155231754 41 20.51339230247173 25.034377508121995 33.160442678389494 21.29178751101678 42 18.61355291909498 28.147022460832556 32.200389649409125 21.03903497066334 43 19.196574802908202 28.432401765524258 30.66731898680827 21.70370444475927 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 234.0 1 336.0 2 438.0 3 1293.5 4 2149.0 5 2149.0 6 3857.5 7 5566.0 8 6445.0 9 7324.0 10 11299.0 11 15274.0 12 15274.0 13 28772.5 14 42271.0 15 71311.0 16 100351.0 17 97236.5 18 94122.0 19 94122.0 20 98917.5 21 103713.0 22 82710.5 23 61708.0 24 66040.0 25 70372.0 26 70372.0 27 74311.5 28 78251.0 29 79473.5 30 80696.0 31 87491.0 32 94286.0 33 94286.0 34 102505.0 35 110724.0 36 121893.5 37 133063.0 38 138318.5 39 143574.0 40 143574.0 41 148879.5 42 154185.0 43 161147.0 44 168109.0 45 186538.5 46 204968.0 47 204968.0 48 300577.0 49 396186.0 50 357559.0 51 318932.0 52 278190.5 53 237449.0 54 237449.0 55 198857.5 56 160266.0 57 125738.0 58 91210.0 59 78900.5 60 66591.0 61 66591.0 62 58306.0 63 50021.0 64 43289.0 65 36557.0 66 31007.5 67 25458.0 68 25458.0 69 21477.5 70 17497.0 71 14486.0 72 11475.0 73 9302.5 74 7130.0 75 7130.0 76 5633.0 77 4136.0 78 3182.0 79 2228.0 80 1678.5 81 1129.0 82 1129.0 83 838.0 84 547.0 85 409.5 86 272.0 87 198.0 88 124.0 89 124.0 90 99.5 91 75.0 92 44.5 93 14.0 94 10.0 95 6.0 96 6.0 97 4.0 98 2.0 99 1.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3098683.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.15048753433181 #Duplication Level Percentage of deduplicated Percentage of total 1 71.89376839553077 25.27101009783242 2 13.825612610335094 9.719540474281688 3 5.576284310106919 5.880273363909099 4 2.693249197735979 3.786760894074707 5 1.5475995702608925 2.7199439701296377 6 0.9249699750888062 1.950788734739417 7 0.6235984962355443 1.5343853817848894 8 0.41856765545167685 1.1770285724182925 9 0.30681791100571915 0.9706319240504632 >10 1.8162146242044324 12.277671794009779 >50 0.20260685261176575 4.9772482866519985 >100 0.14795192600280813 9.88778113111633 >500 0.012489407247909937 2.989747170734749 >1k 0.008326271498605828 6.669681140743247 >5k 0.0010176554053851566 2.3814761529987822 >10k+ 9.251412776228697E-4 7.806030910524485 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 48566 1.5673110156798873 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 47770 1.541622682926908 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 42177 1.3611266463849319 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16382 0.5286762150242539 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 14795 0.4774609083923719 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 14673 0.47352375186490525 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 14621 0.47184561957450954 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 14043 0.4531925337312659 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 13809 0.44564093842448554 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 13208 0.42624560176048987 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 9249 0.29848164526671495 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 8164 0.26346676959211385 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 7696 0.24836357897855313 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 7634 0.2463627289400045 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 6970 0.22493427046264494 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6370 0.2055712055734646 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6052 0.19530878118219902 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5656 0.18252915835534 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 5240 0.16910410003217496 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5102 0.1646505951076635 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 5100 0.16458605155803288 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4922 0.1588416756409094 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4715 0.15216141825414214 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 4421 0.1426735164584438 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4380 0.1413503736910165 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4206 0.13573508487315417 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 4017 0.12963571943306237 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 4011 0.12944208878417057 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 3890 0.1255372040315192 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 3683 0.11885694664475197 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3546 0.1144357134950558 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3533 0.11401618042245688 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 3510 0.11327392960170499 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 3468 0.11191851505946235 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 3461 0.11169261263575525 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3435 0.11085354649055744 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 3429 0.11065991584166562 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 3367 0.108659065803117 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3280 0.10585142139418585 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3216 0.10378602780600661 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3168 0.10223698261487218 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.2271774815300566E-5 0.0 3 0.0 0.0 0.0 3.2271774815300566E-5 0.0 4 0.0 0.0 0.0 3.2271774815300566E-5 0.0 5 3.2271774815300566E-5 0.0 0.0 3.2271774815300566E-5 0.0 6 1.2908709926120226E-4 0.0 0.0 3.2271774815300566E-5 0.0 7 1.2908709926120226E-4 0.0 0.0 3.2271774815300566E-5 0.0 8 1.9363064889180338E-4 0.0 0.0 3.2271774815300566E-5 0.0 9 1.9363064889180338E-4 0.0 0.0 1.6135887407650284E-4 0.0 10 1.9363064889180338E-4 0.0 0.0 2.904459733377051E-4 0.0 11 1.9363064889180338E-4 0.0 0.0 6.777072711213119E-4 0.0 12 1.9363064889180338E-4 0.0 0.0 0.001258599217796722 0.0 13 1.9363064889180338E-4 0.0 0.0 0.0015167734163191266 0.0 14 1.9363064889180338E-4 0.0 0.0 0.0018717629392874327 0.0 15 1.9363064889180338E-4 0.0 0.0 0.0025494702104087445 0.0 16 1.9363064889180338E-4 0.0 0.0 0.0031949057067147558 0.0 17 1.9363064889180338E-4 0.0 0.0 0.004163058951173773 0.0 18 1.9363064889180338E-4 0.0 0.0 0.005034396871186888 0.0 19 1.9363064889180338E-4 0.0 0.0 0.006357539638614212 0.0 20 2.2590242370710396E-4 0.0 0.0 0.009810619543851372 0.0 21 2.2590242370710396E-4 0.0 0.0 0.018265824545460118 0.0 22 2.2590242370710396E-4 0.0 0.0 0.028850966684878705 0.0 23 2.2590242370710396E-4 0.0 0.0 0.03556349584646122 0.0 24 2.2590242370710396E-4 0.0 0.0 0.04440596214585358 0.0 25 2.2590242370710396E-4 0.0 0.0 0.050118066288161775 0.0 26 2.2590242370710396E-4 0.0 0.0 0.06109046972536397 0.0 27 2.2590242370710396E-4 0.0 0.0 0.14386757212660992 0.0 28 2.2590242370710396E-4 0.0 0.0 0.25194574598305153 0.0 29 2.2590242370710396E-4 0.0 0.0 0.37496575157897727 0.0 30 2.2590242370710396E-4 0.0 0.0 0.5908639250933381 0.0 31 2.2590242370710396E-4 0.0 0.0 0.8677557530086168 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11550 0.0 31.425976 1 ACGTTTA 140 0.0 23.785713 26 GTATTGG 1040 0.0 22.947115 1 ATTGGAC 1215 0.0 20.707819 3 TCACGTT 170 0.0 19.588236 24 GGACCCT 1985 0.0 19.571789 6 TTGGACC 2155 0.0 18.800463 4 CAATGCG 140 9.458745E-11 18.5 19 TGGACCC 2155 0.0 18.199535 5 GACCCTC 2145 0.0 18.198135 7 GTATCAA 20585 0.0 17.695652 2 GATACCT 1500 0.0 16.033335 36 TATTGGA 1540 0.0 15.857142 2 TATACCG 200 3.6379788E-12 15.725 5 TTTTTAC 2435 0.0 15.498973 1 CGCATAC 110 1.4533696E-5 15.136364 37 GCGAATA 75 0.0041064955 14.8 29 TACTGTG 470 0.0 14.170214 7 TTGATAC 4345 0.0 14.135788 34 TGATACC 2925 0.0 13.9777775 35 >>END_MODULE