##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088306_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2646229 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.928684932407588 31.0 31.0 33.0 28.0 34.0 2 31.238271139799313 31.0 31.0 34.0 28.0 34.0 3 31.280884609759774 31.0 31.0 34.0 28.0 34.0 4 35.175430773376 35.0 35.0 37.0 33.0 37.0 5 34.96044635592762 35.0 35.0 37.0 32.0 37.0 6 35.02262615971634 36.0 35.0 37.0 32.0 37.0 7 34.82318385899331 35.0 35.0 37.0 32.0 37.0 8 34.904199145274276 36.0 35.0 37.0 32.0 37.0 9 36.3499848274658 38.0 35.0 39.0 32.0 39.0 10 36.17347478241679 38.0 35.0 39.0 31.0 39.0 11 36.2721638981358 38.0 35.0 39.0 32.0 39.0 12 36.023708076663056 38.0 35.0 39.0 30.0 39.0 13 36.09725235419913 38.0 35.0 39.0 31.0 39.0 14 36.86293816597127 39.0 36.0 40.0 31.0 41.0 15 36.99001409175094 38.0 36.0 40.0 31.0 41.0 16 36.94289496487266 38.0 36.0 40.0 31.0 41.0 17 37.08109388869973 39.0 36.0 40.0 31.0 41.0 18 37.100109249804156 39.0 36.0 40.0 31.0 41.0 19 37.200040132581115 39.0 36.0 40.0 31.0 41.0 20 37.190540576798156 39.0 36.0 40.0 31.0 41.0 21 37.11207004382463 39.0 36.0 40.0 31.0 41.0 22 37.04063707260407 39.0 36.0 40.0 31.0 41.0 23 36.907502714239776 39.0 35.0 40.0 31.0 41.0 24 36.8234797517524 39.0 35.0 40.0 30.0 41.0 25 36.69431783870557 38.0 35.0 40.0 30.0 41.0 26 36.43611116044757 38.0 35.0 40.0 30.0 41.0 27 36.31695631783946 38.0 35.0 40.0 30.0 41.0 28 36.13035644307428 38.0 35.0 40.0 30.0 41.0 29 35.90276351744313 38.0 34.0 40.0 29.0 41.0 30 35.64037768462215 38.0 34.0 40.0 28.0 41.0 31 35.33517620735016 38.0 34.0 40.0 27.0 41.0 32 35.22327394945789 37.0 34.0 40.0 27.0 41.0 33 35.01261342083395 37.0 33.0 40.0 27.0 41.0 34 35.11781293304548 37.0 33.0 40.0 27.0 41.0 35 34.99186124859187 37.0 33.0 40.0 26.0 41.0 36 34.90004871082586 37.0 33.0 40.0 25.0 41.0 37 34.74783210372194 37.0 33.0 40.0 25.0 41.0 38 34.66070358990095 38.0 33.0 40.0 24.0 41.0 39 34.512292397974626 38.0 33.0 40.0 24.0 41.0 40 34.26198677438725 37.0 33.0 40.0 23.0 41.0 41 34.09405610776694 37.0 33.0 40.0 21.0 41.0 42 33.85459535059135 37.0 33.0 40.0 20.0 41.0 43 33.47473064500465 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 5.0 15 10.0 16 28.0 17 88.0 18 248.0 19 555.0 20 1160.0 21 2393.0 22 4366.0 23 7645.0 24 12025.0 25 19162.0 26 29142.0 27 41601.0 28 56955.0 29 76020.0 30 96183.0 31 115362.0 32 139135.0 33 167140.0 34 197983.0 35 234404.0 36 287989.0 37 369262.0 38 417630.0 39 369736.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.889885191342096 22.48331493608452 14.86572023811998 21.761079634453406 2 18.34538885334565 24.143904401319766 36.439779021392326 21.07092772394226 3 19.84420093650247 25.117780811864733 34.46205902814911 20.575959223483682 4 12.734838897162717 16.07903170889594 36.63292179172702 34.55320760221432 5 11.43993962729605 39.12318246077721 35.63312169884013 13.803756213086624 6 31.28969563858608 37.05552316144974 12.792732601751396 18.862048598212777 7 24.139294067142337 35.13732182664464 21.19582243260126 19.52756167361177 8 26.698369642234287 34.14175417169111 19.01260246184287 20.147273724231727 9 23.324134079098975 14.595788950994038 23.90998662625192 38.17009034365507 10 15.962715244976907 27.441275868415016 34.19798513280597 22.39802375380211 11 31.181881840158205 22.261716578572756 25.587505843220676 20.96889573804837 12 21.63962378161527 27.29087316328254 31.67310916780067 19.396393887301514 13 32.637046907127086 20.854960020466862 28.222085087874106 18.285907984531953 14 19.890304278276748 23.712309100988616 29.27596213328476 27.121424487449875 15 20.88719457008445 29.82848423171237 27.950075371405873 21.3342458267973 16 20.447436710881785 29.192220325602964 28.521756809406895 21.838586154108356 17 20.626030475820496 26.465623345523003 27.58181548157775 25.32653069707875 18 23.21624470142229 24.37351415920542 32.024136988900054 20.386104150472235 19 21.6581784871982 23.510134610421094 33.86022146987278 20.97146543250792 20 23.46728117634566 22.746670828563968 34.020487266975 19.765560728115368 21 22.127790149680923 23.85058133668704 34.90302615533274 19.1186023582993 22 19.300257082814827 24.507705115468088 34.180904222574846 22.011133579142246 23 21.460841068554533 24.812062750427117 35.727520180604174 17.999576000414173 24 21.03400726089843 24.394903086618733 32.16516786718005 22.405921785302784 25 20.81955114239924 25.667733215832794 33.344468675991386 20.168246965776582 26 20.56110790109246 26.515089963869343 33.306452313839806 19.617349821198392 27 18.455999083979506 26.852362361685252 32.95640702297496 21.735231531360284 28 19.886714263958257 25.659041602219613 32.851843132245925 21.602401001576204 29 19.918155231463338 25.715045825588035 31.575498567962185 22.79130037498644 30 20.28796449589208 26.063163845608223 34.39411328346866 19.254758375031034 31 22.244219982473172 25.425161616776176 33.688543206200215 18.642075194550433 32 21.233838794752835 25.64830934888855 31.761158992664658 21.356692863693958 33 20.543157829500018 25.69603764451225 32.7995045024448 20.961300023542936 34 19.08119063013821 27.17191142565515 33.7530500950598 19.993847849146842 35 18.254731544397707 30.666998207638112 31.694573674462795 19.383696573501386 36 22.08539019109835 26.820052232818853 31.35677222190521 19.737785354177586 37 20.851445585397183 28.432346558064324 30.961795067622646 19.75441278891585 38 20.7009673010159 25.85426280189659 32.73027391053457 20.71449598655294 39 20.157779239816357 25.48112805052019 33.58809838453134 20.772994325132103 40 17.84584780833405 26.755129658090816 32.90841419998042 22.49060833359471 41 21.01447002508097 25.23447517202782 32.74251774884184 21.008537054049366 42 18.697890469796832 28.685234724583548 31.846299016449446 20.770575789170174 43 19.320436742247175 29.092040031304922 29.99823522454028 21.58928800190762 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 127.0 1 227.5 2 328.0 3 989.5 4 1651.0 5 1651.0 6 3104.0 7 4557.0 8 5315.0 9 6073.0 10 9557.5 11 13042.0 12 13042.0 13 24890.5 14 36739.0 15 62676.0 16 88613.0 17 86029.5 18 83446.0 19 83446.0 20 87133.5 21 90821.0 22 71194.5 23 51568.0 24 55571.5 25 59575.0 26 59575.0 27 62545.0 28 65515.0 29 66973.0 30 68431.0 31 72282.0 32 76133.0 33 76133.0 34 82600.5 35 89068.0 36 97591.0 37 106114.0 38 110004.5 39 113895.0 40 113895.0 41 117530.5 42 121166.0 43 127150.0 44 133134.0 45 152316.0 46 171498.0 47 171498.0 48 259427.5 49 347357.0 50 316058.0 51 284759.0 52 249493.5 53 214228.0 54 214228.0 55 177905.5 56 141583.0 57 110940.5 58 80298.0 59 68779.5 60 57261.0 61 57261.0 62 50041.0 63 42821.0 64 37056.0 65 31291.0 66 26964.5 67 22638.0 68 22638.0 69 19455.0 70 16272.0 71 13629.5 72 10987.0 73 8963.5 74 6940.0 75 6940.0 76 5453.5 77 3967.0 78 3031.0 79 2095.0 80 1590.0 81 1085.0 82 1085.0 83 828.0 84 571.0 85 444.0 86 317.0 87 238.5 88 160.0 89 160.0 90 118.0 91 76.0 92 46.5 93 17.0 94 12.0 95 7.0 96 7.0 97 6.0 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2646229.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 36.90442522470662 #Duplication Level Percentage of deduplicated Percentage of total 1 73.12877636542515 26.987754591521256 2 13.633106564332314 10.06243923567718 3 5.254560224942042 5.817495747302736 4 2.5132815199939 3.710048396930076 5 1.3619230860399236 2.5130494345281025 6 0.8301487659555816 1.8381697835154143 7 0.5417561912311453 1.3995240594518166 8 0.38654629167995275 1.1412214973752361 9 0.2861784651790144 0.9505126592208221 >10 1.7357408266707064 12.258257985197266 >50 0.18497371541661825 4.769151440727313 >100 0.12324807229875724 8.536818656458042 >500 0.008897132627232436 2.2308654524056584 >1k 0.008793677596683218 6.967106849982742 >5k 0.0010345503054921433 2.4075601061636522 >10k+ 0.0010345503054921433 8.410024103542787 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 44239 1.6717751940591687 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 42953 1.6231777370741534 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 38056 1.438121946362163 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 15878 0.6000236563048776 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 14655 0.5538069456573864 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 14495 0.5477606057525634 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 12768 0.4824979244048795 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 12732 0.48113749792629434 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 12319 0.46553038304696986 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 12181 0.46031541487905997 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 8960 0.33859503467009094 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 7330 0.2769979468897061 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6941 0.262297782996105 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 6732 0.25439975149542987 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6192 0.2339933543166521 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5492 0.20754061723305123 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 5483 0.20720051061340494 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 5440 0.20557555676398379 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 5279 0.19949142723475555 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5210 0.19688394315080066 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4692 0.177308917708936 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4615 0.17439911662973992 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4352 0.164460445411187 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4266 0.16121053771234461 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3690 0.13944371405498165 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3438 0.12992072870488533 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3372 0.12742661349414583 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 3322 0.1255371322738886 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3308 0.1250080775322166 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 3277 0.12383659917565713 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3261 0.12323196518517483 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 3260 0.1231941755607697 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 3255 0.12300522743874395 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3219 0.12164480096015877 No Hit TTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCC 3171 0.11983089898871185 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3166 0.11964195086668615 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3083 0.11650541204105919 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 3025 0.11431361382556082 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 3019 0.11408687607912997 No Hit GATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGA 3010 0.11374676945948366 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 2994 0.11314213546900136 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 2932 0.11079917875588244 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2920 0.1103457032630207 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 2849 0.10766263993025547 No Hit ACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTAA 2796 0.10565978983678283 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2757 0.10418599448498221 No Hit TTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAAC 2671 0.10093608678613981 No Hit CTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTAAA 2666 0.1007471386641141 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 3.778962440514407E-5 0.0 0.0 0.0 0.0 6 3.778962440514407E-5 0.0 0.0 0.0 7.557924881028814E-5 7 7.557924881028814E-5 0.0 0.0 0.0 7.557924881028814E-5 8 1.511584976205763E-4 0.0 0.0 0.0 7.557924881028814E-5 9 1.511584976205763E-4 0.0 0.0 3.778962440514407E-5 7.557924881028814E-5 10 1.8894812202572037E-4 0.0 0.0 3.023169952411526E-4 7.557924881028814E-5 11 1.8894812202572037E-4 0.0 0.0 5.668443660771611E-4 7.557924881028814E-5 12 1.8894812202572037E-4 0.0 0.0 9.825302345337458E-4 1.1336887321543223E-4 13 1.8894812202572037E-4 0.0 0.0 0.0011714783565594663 1.1336887321543223E-4 14 1.8894812202572037E-4 0.0 0.0 0.001549374600610907 1.511584976205763E-4 15 1.8894812202572037E-4 0.0 0.0 0.00204063971787778 2.2673774643086446E-4 16 2.2673774643086446E-4 0.0 0.0 0.0028720114547909495 2.2673774643086446E-4 17 2.645273708360085E-4 0.0 0.0 0.0037789624405144074 2.2673774643086446E-4 18 2.645273708360085E-4 0.0 0.0 0.004459175679807001 2.2673774643086446E-4 19 2.645273708360085E-4 0.0 0.0 0.005706233285176755 2.2673774643086446E-4 20 3.023169952411526E-4 0.0 0.0 0.009485195725691163 2.2673774643086446E-4 21 3.023169952411526E-4 0.0 0.0 0.017005330982314833 2.2673774643086446E-4 22 3.023169952411526E-4 0.0 0.0 0.027397477693729456 2.2673774643086446E-4 23 3.023169952411526E-4 0.0 0.0 0.0341240308378451 2.2673774643086446E-4 24 3.023169952411526E-4 0.0 0.0 0.04372259543675169 2.2673774643086446E-4 25 3.023169952411526E-4 0.0 0.0 0.04905093247787701 2.2673774643086446E-4 26 3.023169952411526E-4 0.0 0.0 0.05880065557440418 2.2673774643086446E-4 27 3.023169952411526E-4 0.0 0.0 0.12258954157028738 2.2673774643086446E-4 28 3.023169952411526E-4 0.0 0.0 0.21456948737240805 2.2673774643086446E-4 29 3.401066196462967E-4 0.0 0.0 0.3240460292741104 2.2673774643086446E-4 30 3.7789624405144075E-4 0.0 0.0 0.5239909320017277 2.2673774643086446E-4 31 4.156858684565848E-4 0.0 0.0 0.7529582662724957 2.645273708360085E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11140 0.0 30.174597 1 GTATTGG 1215 0.0 22.99177 1 TCTATAC 175 0.0 22.2 3 ATTGGAC 1245 0.0 21.694778 3 TTGGACC 2050 0.0 19.492683 4 TAAACGT 175 0.0 19.028572 4 TATTGGA 1510 0.0 18.745033 2 ACGTTTA 170 0.0 18.5 26 TGGACCC 2195 0.0 18.120728 5 ACGCGAA 105 4.803096E-7 17.619047 34 GGACCCT 2220 0.0 17.583334 6 TGACGCG 85 2.7252863E-5 17.411764 32 GTATCAA 19405 0.0 17.389332 2 CATTGCG 120 1.0426811E-7 16.958334 29 TCCGGTC 295 0.0 16.932203 8 GACCCTC 2305 0.0 16.373102 7 TCACGTA 285 0.0 16.22807 25 TAGACTA 175 1.3278623E-10 15.857143 5 TACCCGG 105 9.352221E-6 15.857142 20 GTCGTCA 130 2.5924965E-7 15.653846 24 >>END_MODULE