##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088305_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3556882 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.953003501381264 31.0 31.0 33.0 28.0 34.0 2 31.258810103905613 31.0 31.0 34.0 28.0 34.0 3 31.305249935196052 31.0 31.0 34.0 28.0 34.0 4 35.198965835807876 35.0 35.0 37.0 33.0 37.0 5 34.976726526210314 35.0 35.0 37.0 32.0 37.0 6 35.03973367685518 36.0 35.0 37.0 32.0 37.0 7 34.847638746520126 35.0 35.0 37.0 32.0 37.0 8 34.92350688046441 36.0 35.0 37.0 32.0 37.0 9 36.37998421089033 38.0 35.0 39.0 32.0 39.0 10 36.20486847750361 38.0 35.0 39.0 32.0 39.0 11 36.29650547867486 38.0 35.0 39.0 32.0 39.0 12 36.04401326780028 38.0 35.0 39.0 30.0 39.0 13 36.13934086090008 38.0 35.0 39.0 31.0 39.0 14 36.93415412712595 39.0 36.0 40.0 31.0 41.0 15 37.04878458155204 39.0 36.0 40.0 31.0 41.0 16 37.00425709933588 38.0 36.0 40.0 31.0 41.0 17 37.13067906104279 39.0 36.0 40.0 31.0 41.0 18 37.14678586469835 39.0 36.0 40.0 31.0 41.0 19 37.241515743283024 39.0 36.0 40.0 31.0 41.0 20 37.23050272682647 39.0 36.0 40.0 31.0 41.0 21 37.1612277269811 39.0 36.0 40.0 31.0 41.0 22 37.094451544920524 39.0 36.0 40.0 31.0 41.0 23 36.98670492864256 39.0 36.0 40.0 31.0 41.0 24 36.894475273568254 39.0 35.0 40.0 31.0 41.0 25 36.75758459234802 38.0 35.0 40.0 30.0 41.0 26 36.515708139882065 38.0 35.0 40.0 30.0 41.0 27 36.3942739736657 38.0 35.0 40.0 30.0 41.0 28 36.214551958709905 38.0 35.0 40.0 30.0 41.0 29 35.995600922380895 38.0 35.0 40.0 29.0 41.0 30 35.74337776738166 38.0 34.0 40.0 29.0 41.0 31 35.45934107457037 38.0 34.0 40.0 27.0 41.0 32 35.34970431968224 37.0 34.0 40.0 27.0 41.0 33 35.146451302011144 37.0 33.0 40.0 27.0 41.0 34 35.26533042141966 38.0 34.0 40.0 27.0 41.0 35 35.14102267097981 38.0 33.0 40.0 26.0 41.0 36 35.04718627157156 38.0 33.0 40.0 25.0 41.0 37 34.9091890031775 38.0 33.0 40.0 25.0 41.0 38 34.827353845306085 38.0 33.0 40.0 24.0 41.0 39 34.683335291977635 38.0 33.0 40.0 24.0 41.0 40 34.449573249829484 38.0 33.0 40.0 23.0 41.0 41 34.29170605041157 38.0 33.0 40.0 22.0 41.0 42 34.082514685615095 38.0 33.0 40.0 21.0 41.0 43 33.69191640318684 37.0 33.0 40.0 19.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 3.0 15 10.0 16 44.0 17 128.0 18 272.0 19 728.0 20 1571.0 21 2915.0 22 5428.0 23 9425.0 24 15787.0 25 24445.0 26 37280.0 27 53570.0 28 74536.0 29 99149.0 30 126482.0 31 152430.0 32 182724.0 33 221165.0 34 263203.0 35 312581.0 36 383713.0 37 489517.0 38 565490.0 39 534285.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.75558312027219 22.257527801034726 14.83358177190022 22.15330730679286 2 18.35655498270676 23.919910753294598 36.311662855276055 21.411871408722583 3 19.657947606920892 24.872683434536203 34.220393029625384 21.248975928917517 4 12.80551336816909 16.129435837342932 36.48456710118582 34.58048369330216 5 11.534315729338223 39.00770393844946 35.56128654253922 13.89669378967309 6 31.4014071875311 37.11973014567253 12.850131097967266 18.628731568829103 7 24.287789136665204 35.03979046816847 21.147960488990076 19.524459906176254 8 26.60535266562118 34.258431963725535 19.02672059404838 20.1094947766049 9 23.54927714779405 14.532897071086417 23.672699853410936 38.24512592770859 10 15.859339725073815 27.558940667697158 34.23245415507177 22.349265452157255 11 31.46637982367703 22.17357786960602 25.476611256713046 20.88343105000391 12 21.642044914619042 27.315581455893113 31.518644700611375 19.523728928876473 13 32.28569291868552 21.093896283317804 28.136187818431985 18.484222979564684 14 19.886068753475655 23.70773053477737 29.26186474558335 27.144335966163624 15 20.982562817658838 29.684960029598955 28.05679243787115 21.27568471487106 16 20.45381319931333 29.239120105755546 28.39855244003034 21.908514254900783 17 20.716993141746055 26.52590105603728 27.55503275059448 25.202073051622182 18 23.063936335250933 24.679143137163393 31.952226697427694 20.304693830157987 19 21.9544814812524 23.764212588441225 33.46400021142112 20.817305718885248 20 23.42307110553569 22.683322078157218 33.907647203365194 19.985959612941897 21 21.818210443866285 24.018424001695866 34.85648385299259 19.306881701445256 22 19.299965531608866 24.521280154922202 34.08445936637763 22.0942949470913 23 21.459244360650708 24.7320265333514 35.6323881421987 18.17634096379919 24 21.1093311501478 24.5580539360035 31.967211732073203 22.3654031817755 25 20.81736194790831 25.605010230870747 33.37206575871789 20.205562062503056 26 20.348327552052613 26.6146304544261 33.1897712659571 19.847270727564197 27 18.472358655699008 26.843313891211462 32.78053643612579 21.903791016963734 28 19.732816551125396 25.63289982630855 32.806542359291086 21.82774126327497 29 19.990963995994242 25.59975281721463 31.523171136967715 22.886112049823414 30 20.52511160055352 25.783003203367443 34.33892381023605 19.352961385842992 31 22.043632597314165 25.414534415254707 33.5240528080493 19.01778017938183 32 21.195361555429727 25.543214534527714 31.838109895127246 21.42331401491531 33 20.48074690135911 25.492917673400466 32.97812522315893 21.048210202081485 34 19.140359449652813 26.652950533641544 34.03177277177033 20.174917244935312 35 18.403084499288987 30.030571719837766 31.817417614641137 19.74892616623211 36 22.147909320579092 26.42013426366126 31.42699139302344 20.004965022736204 37 20.95096210669907 27.83977652337075 31.075306968294143 20.13395440163604 38 20.697003724048198 25.466967979258236 32.86763519284587 20.968393103847696 39 20.077331775414535 25.085988233514634 33.70848400368637 21.12819598738446 40 17.98788939301332 26.182060580024864 33.064605460625344 22.76544456633647 41 20.857818730000037 24.91007573487116 32.98723432489467 21.24487121023413 42 18.83973097786207 28.133910542998052 31.995438701649366 21.03091977749051 43 19.514282453002377 28.425261225983885 30.30522238297475 21.75523393803899 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 252.0 1 337.0 2 422.0 3 1349.5 4 2277.0 5 2277.0 6 4157.5 7 6038.0 8 6975.5 9 7913.0 10 12280.5 11 16648.0 12 16648.0 13 31976.5 14 47305.0 15 80643.5 16 113982.0 17 110772.0 18 107562.0 19 107562.0 20 112154.0 21 116746.0 22 92076.0 23 67406.0 24 71967.5 25 76529.0 26 76529.0 27 80750.0 28 84971.0 29 87383.5 30 89796.0 31 96906.0 32 104016.0 33 104016.0 34 114048.5 35 124081.0 36 135731.5 37 147382.0 38 154854.0 39 162326.0 40 162326.0 41 167416.5 42 172507.0 43 180328.0 44 188149.0 45 211897.5 46 235646.0 47 235646.0 48 350193.5 49 464741.0 50 419622.5 51 374504.0 52 325520.0 53 276536.0 54 276536.0 55 231443.0 56 186350.0 57 147133.5 58 107917.0 59 93623.0 60 79329.0 61 79329.0 62 70246.0 63 61163.0 64 52803.0 65 44443.0 66 38006.5 67 31570.0 68 31570.0 69 26803.5 70 22037.0 71 18583.5 72 15130.0 73 12320.0 74 9510.0 75 9510.0 76 7574.5 77 5639.0 78 4212.0 79 2785.0 80 2177.0 81 1569.0 82 1569.0 83 1196.5 84 824.0 85 670.0 86 516.0 87 364.0 88 212.0 89 212.0 90 163.5 91 115.0 92 71.0 93 27.0 94 18.5 95 10.0 96 10.0 97 5.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3556882.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.124780738716545 #Duplication Level Percentage of deduplicated Percentage of total 1 71.13270687546182 24.27388025476529 2 13.922238549095125 9.501866757599567 3 5.51799961208415 5.649015806360837 4 2.8169395255649694 3.8450977465651515 5 1.6157428075973108 2.756843451970825 6 0.9971042426547293 2.0415578192541997 7 0.6833360722727109 1.6323085546013416 8 0.4936545563914288 1.3476682798020714 9 0.37359520257858514 1.1473968935727548 >10 2.086922377910252 13.475878939963726 >50 0.19724365523334447 4.707593760061488 >100 0.14019154223199876 9.11716262156034 >500 0.01120398670892795 2.60884617002978 >1k 0.009046181861237257 6.807860221693167 >5k 0.0010789024238172875 2.4668446426526938 >10k+ 9.959099296774961E-4 8.620178079546871 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 56219 1.5805697237074492 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 54908 1.543711599091564 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 49481 1.3911341450180243 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 18989 0.5338664594439737 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 18606 0.5230986015279675 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 18507 0.5203152648864933 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 18074 0.508141681393985 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 17654 0.4963335865513672 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 17293 0.4861842478890219 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 14115 0.39683633024654735 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 10364 0.2913787974973586 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 10164 0.28575589519135014 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 8907 0.250415954198087 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 8876 0.24954440434065564 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 7715 0.21690345645427653 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 7479 0.21026843173318652 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 7109 0.19986606246707087 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6857 0.19278120556150022 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 6701 0.1883953417628136 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 6534 0.18370021833729655 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5871 0.16506029719287849 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 5504 0.15474227146135294 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 5272 0.14821970478638313 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 5202 0.14625168897928015 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 5076 0.14270926052649485 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 4606 0.12949544010737493 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 4606 0.12949544010737493 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4539 0.1276117678348621 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 4514 0.12690890504661104 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 4420 0.12426614096278707 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 4204 0.11819340647229792 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 4189 0.1177716887993473 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 4142 0.11645030675743531 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 4046 0.11375131365055123 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4016 0.11290787830464998 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 4010 0.11273919123546972 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 3854 0.10835332743678312 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 3825 0.10753800660241188 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3746 0.10531696019153855 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 3740 0.10514827312235828 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3724 0.1046984409378776 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 3662 0.10295534122301499 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 3597 0.10112789797356223 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 2.8114511530042322E-5 0.0 3 0.0 0.0 0.0 2.8114511530042322E-5 0.0 4 0.0 0.0 0.0 2.8114511530042322E-5 0.0 5 0.0 0.0 0.0 2.8114511530042322E-5 0.0 6 2.8114511530042322E-5 0.0 0.0 2.8114511530042322E-5 0.0 7 2.8114511530042322E-5 0.0 0.0 5.6229023060084644E-5 0.0 8 2.8114511530042322E-5 0.0 0.0 5.6229023060084644E-5 0.0 9 5.6229023060084644E-5 0.0 0.0 1.1245804612016929E-4 0.0 10 5.6229023060084644E-5 0.0 0.0 2.2491609224033858E-4 2.8114511530042322E-5 11 5.6229023060084644E-5 0.0 0.0 5.341757190708041E-4 2.8114511530042322E-5 12 5.6229023060084644E-5 0.0 0.0 0.0010683514381416082 2.8114511530042322E-5 13 5.6229023060084644E-5 0.0 0.0 0.0013213820419119891 2.8114511530042322E-5 14 5.6229023060084644E-5 0.0 0.0 0.001546298134152328 2.8114511530042322E-5 15 5.6229023060084644E-5 0.0 0.0 0.002108588364753174 2.8114511530042322E-5 16 1.1245804612016929E-4 0.0 0.0 0.0029239091991244016 2.8114511530042322E-5 17 1.1245804612016929E-4 0.0 0.0 0.004048489660326095 2.8114511530042322E-5 18 1.6868706918025394E-4 0.0 0.0 0.004976268540817491 2.8114511530042322E-5 19 1.6868706918025394E-4 0.0 0.0 0.006691253744150073 2.8114511530042322E-5 20 1.6868706918025394E-4 0.0 0.0 0.010093109639285194 2.8114511530042322E-5 21 1.9680158071029626E-4 0.0 0.0 0.018836722725128357 2.8114511530042322E-5 22 1.9680158071029626E-4 0.0 0.0 0.030532359521625963 2.8114511530042322E-5 23 1.9680158071029626E-4 0.0 0.0 0.03874179688839832 2.8114511530042322E-5 24 1.9680158071029626E-4 0.0 0.0 0.047625982531891695 2.8114511530042322E-5 25 1.9680158071029626E-4 0.0 0.0 0.05285528167647957 2.8114511530042322E-5 26 1.9680158071029626E-4 0.0 0.0 0.06277970424658451 2.8114511530042322E-5 27 2.2491609224033858E-4 0.0 0.0 0.1450146504719583 2.8114511530042322E-5 28 2.2491609224033858E-4 0.0 0.0 0.25064087029032733 2.8114511530042322E-5 29 2.2491609224033858E-4 0.0 0.0 0.3704649184313677 2.8114511530042322E-5 30 2.2491609224033858E-4 0.0 0.0 0.579299510076522 2.8114511530042322E-5 31 2.2491609224033858E-4 0.0 0.0 0.8525163331254734 2.8114511530042322E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 12805 0.0 32.188988 1 GTATTGG 1190 0.0 25.962185 1 ATTGGAC 1430 0.0 22.122377 3 TTGGACC 2415 0.0 20.070395 4 GGACCCT 2260 0.0 19.973452 6 TGGACCC 2400 0.0 19.19375 5 GACCCTC 2400 0.0 18.26875 7 GTATCAA 23380 0.0 17.732464 2 TATTGGA 1775 0.0 17.614086 2 GACGCTT 75 2.068801E-4 17.266666 14 CGAATTA 180 1.0913936E-11 16.444445 15 TACCCCG 260 0.0 16.365385 5 GTGGTAT 1405 0.0 16.19573 1 GATACCT 1750 0.0 15.434286 36 CAATGCG 170 1.4897523E-9 15.235294 19 TATACCG 160 1.0986696E-8 15.03125 5 TTAACGG 310 0.0 14.919355 35 TTTTTAC 3055 0.0 14.71522 1 GTATAGA 190 4.5656634E-10 14.605264 1 GATACTG 1505 0.0 14.504982 36 >>END_MODULE