##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088304_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 844220 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.590329534955345 31.0 30.0 31.0 27.0 34.0 2 30.8799234796617 31.0 31.0 34.0 27.0 34.0 3 30.886995096065007 31.0 30.0 34.0 27.0 34.0 4 34.787860984103666 35.0 35.0 37.0 32.0 37.0 5 34.52082277131554 35.0 35.0 37.0 30.0 37.0 6 34.64802184264765 35.0 35.0 37.0 31.0 37.0 7 34.45990263201535 35.0 35.0 37.0 30.0 37.0 8 34.55870389235034 35.0 35.0 37.0 30.0 37.0 9 35.97781976262112 37.0 35.0 39.0 30.0 39.0 10 35.70980905451186 37.0 35.0 39.0 30.0 39.0 11 35.85227665774324 37.0 35.0 39.0 30.0 39.0 12 35.57983464025965 37.0 35.0 39.0 30.0 39.0 13 35.690588946009335 37.0 35.0 39.0 30.0 39.0 14 36.435125915045845 38.0 35.0 40.0 30.0 41.0 15 36.54534363080714 38.0 35.0 40.0 30.0 41.0 16 36.47005638340717 38.0 35.0 40.0 30.0 41.0 17 36.57315865532681 38.0 35.0 40.0 30.0 41.0 18 36.57641136196726 38.0 35.0 40.0 30.0 41.0 19 36.67374262632963 38.0 35.0 40.0 30.0 41.0 20 36.64575229205657 38.0 35.0 40.0 30.0 41.0 21 36.56107768117315 38.0 35.0 40.0 30.0 41.0 22 36.48209353012248 38.0 35.0 40.0 30.0 41.0 23 36.347602520669966 38.0 35.0 40.0 30.0 41.0 24 36.26506597806259 38.0 35.0 40.0 30.0 41.0 25 36.12464523465447 38.0 34.0 40.0 29.0 41.0 26 35.83490085522731 38.0 34.0 40.0 29.0 41.0 27 35.67634976664851 38.0 34.0 40.0 27.0 41.0 28 35.483578924924785 38.0 34.0 40.0 27.0 41.0 29 35.28209116107176 38.0 34.0 40.0 27.0 41.0 30 35.05350856411836 37.0 33.0 40.0 27.0 41.0 31 34.77069484257658 37.0 33.0 40.0 25.0 41.0 32 34.651127668143374 37.0 33.0 40.0 25.0 41.0 33 34.465815782615906 37.0 33.0 40.0 25.0 41.0 34 34.61448200705977 37.0 33.0 40.0 25.0 41.0 35 34.526112861576365 37.0 33.0 40.0 25.0 41.0 36 34.46056478169198 37.0 33.0 40.0 24.0 41.0 37 34.337462983582476 37.0 33.0 40.0 24.0 41.0 38 34.286561559782996 37.0 33.0 40.0 24.0 41.0 39 34.15899054748762 37.0 33.0 40.0 23.0 41.0 40 33.962872237094594 37.0 33.0 40.0 22.0 41.0 41 33.820834616569144 37.0 33.0 40.0 21.0 41.0 42 33.64252564497406 37.0 32.0 40.0 21.0 41.0 43 33.238476937291225 37.0 31.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 5.0 16 23.0 17 55.0 18 124.0 19 256.0 20 577.0 21 1141.0 22 1961.0 23 3208.0 24 5204.0 25 7874.0 26 11182.0 27 15924.0 28 21344.0 29 27576.0 30 34295.0 31 41211.0 32 48888.0 33 58110.0 34 67997.0 35 79679.0 36 95990.0 37 117628.0 38 130747.0 39 73219.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.606619127715526 24.150813768922795 14.818056904598329 21.424510198763354 2 20.60943829807396 25.137760299448008 33.461775366610595 20.79102603586743 3 21.753808249034613 25.614887114733126 32.42353888796759 20.20776574826467 4 15.483760157304967 17.804363791428774 35.06100305607543 31.650872995190827 5 12.009665726943213 39.84447182014167 35.087299519082706 13.058562933832413 6 31.89630664992538 37.79263699035796 13.221198265854872 17.08985809386179 7 24.37859799578309 34.697590675416365 21.912771552438937 19.011039776361613 8 26.526024022174315 35.34351235459951 19.36083011537277 18.769633507853403 9 24.152116746819548 14.414015304067659 22.812063206273248 38.621804742839544 10 16.215796830210135 28.186254767714576 34.08696785198171 21.510980550093578 11 32.53215986354268 22.564260500817323 24.237047215180876 20.66653242045912 12 20.358792731752388 27.84712515694961 31.5974509014238 20.1966312098742 13 31.637606311151124 21.22799744142522 27.668143374949654 19.466252872473998 14 19.975243419961622 23.474212882897824 28.740138826372274 27.810404870768284 15 21.95991566179432 29.936035630522852 26.875695908649405 21.228352799033427 16 20.8579517187463 28.918172988083672 28.172751178602734 22.051124114567294 17 20.847409443036174 27.328658406576483 28.169434507592804 23.654497642794535 18 22.3145625547843 25.321598635426785 31.225983748312053 21.137855061476866 19 21.955532917959776 24.577124446234393 32.673592191608826 20.79375044419701 20 22.829949539219633 24.273649048826133 32.80827272511904 20.088128686835187 21 21.935751344436287 24.961858283385848 33.32756864324465 19.77482172893322 22 20.10814716543081 25.39468385018123 32.77522446755585 21.721944516832107 23 21.5215228258037 25.702068181279763 33.87967591386132 18.896733079055224 24 21.34514699959726 25.544526308308264 31.282959418161145 21.827367273933334 25 21.25535997725711 26.18689441140935 32.17514391983132 20.382601691502213 26 21.04581744095141 26.858994101063704 32.0051645305726 20.090023927412286 27 19.751249674255526 26.92319537561299 31.7754850631352 21.550069886996283 28 20.502949468148113 26.45045130416242 32.07576224206961 20.97083698561986 29 20.64023595745185 25.883892824145367 31.23818435952714 22.237686858875648 30 20.936248845087775 26.291251095685958 32.822605481983366 19.9498945772429 31 21.840397052900904 26.07566748004075 32.443794271635355 19.640141195422995 32 21.22550993816778 26.105399066594014 31.369429769491365 21.299661225746842 33 20.951647674776716 26.255241524721047 31.801544621070338 20.9915661794319 34 20.06585961005425 26.967496624102722 32.615787354007246 20.350856411835778 35 19.53720594157921 28.959749828243826 31.452228092203455 20.050816137973516 36 22.14707066878302 26.268034398616475 30.934353604510672 20.650541328089833 37 21.214256947241243 27.28755537656061 30.922152993295587 20.57603468290256 38 21.09722584160527 25.535168557958826 32.1771576129445 21.19044798749141 39 20.53291795977352 25.522849494207673 32.78552983819383 21.158702707824975 40 19.166094146075668 26.326786856506594 32.05988960223639 22.44722939518135 41 20.9118476226576 25.32775816730236 32.099334296747294 21.661059913292743 42 19.64653763237071 27.500177678804107 31.27916893700694 21.574115751818248 43 20.06976854374452 27.626211177181304 30.223401483025754 22.080618796048423 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 89.0 1 106.5 2 124.0 3 282.0 4 440.0 5 440.0 6 870.5 7 1301.0 8 1486.0 9 1671.0 10 2537.5 11 3404.0 12 3404.0 13 6760.0 14 10116.0 15 17119.5 16 24123.0 17 22900.5 18 21678.0 19 21678.0 20 23973.5 21 26269.0 22 21450.0 23 16631.0 24 17803.0 25 18975.0 26 18975.0 27 20220.5 28 21466.0 29 22645.0 30 23824.0 31 25778.5 32 27733.0 33 27733.0 34 30562.5 35 33392.0 36 36006.0 37 38620.0 38 40550.0 39 42480.0 40 42480.0 41 44010.0 42 45540.0 43 47229.0 44 48918.0 45 52034.5 46 55151.0 47 55151.0 48 73563.5 49 91976.0 50 83945.0 51 75914.0 52 67471.0 53 59028.0 54 59028.0 55 51001.5 56 42975.0 57 36152.5 58 29330.0 59 26144.5 60 22959.0 61 22959.0 62 20627.0 63 18295.0 64 15981.0 65 13667.0 66 11624.0 67 9581.0 68 9581.0 69 8193.5 70 6806.0 71 5796.5 72 4787.0 73 3935.5 74 3084.0 75 3084.0 76 2461.0 77 1838.0 78 1414.0 79 990.0 80 752.0 81 514.0 82 514.0 83 389.5 84 265.0 85 205.5 86 146.0 87 107.5 88 69.0 89 69.0 90 54.5 91 40.0 92 22.5 93 5.0 94 5.0 95 5.0 96 5.0 97 2.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 844220.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.1269804516918 #Duplication Level Percentage of deduplicated Percentage of total 1 83.49321345493672 46.02728745979227 2 9.50269734402314 10.477100214446144 3 2.7322544409325014 4.518628114630023 4 1.2398716783881447 2.7340152710843824 5 0.6572115746162921 1.8115044813248957 6 0.4132652990197848 1.3669240836255745 7 0.30486419733712505 1.1764369852917083 8 0.2270544333753763 1.0013460248123462 9 0.16894927768221082 0.8382297175303217 >10 1.113237956202103 11.49359349761771 >50 0.09114355811931125 3.5047655326417613 >100 0.04503252162000731 4.6464452833436996 >500 0.007110398147300715 2.7223242349262264 >1k 0.0034474657683882253 3.8596449971505216 >5k 2.1546661052426408E-4 1.0398021882518516 >10k+ 4.3093322104852816E-4 2.781951913530571 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12051 1.4274715121650754 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11370 1.3468053351022244 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8754 1.036933500746251 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3997 0.4734547866669826 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3130 0.37075643789533536 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3013 0.3568974911752861 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2979 0.35287010494894694 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2838 0.33616829736324655 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2715 0.32159863542678446 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2358 0.27931108005022387 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1470 0.17412522802113195 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1441 0.17069010447513683 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1413 0.1673734334652105 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1319 0.15623889507474356 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1235 0.14628888204496457 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1225 0.1451043566842766 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1205 0.14273530596290068 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1083 0.1282840965625074 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1073 0.12709957120181942 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 992 0.11750491578024687 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 978 0.11584658027528369 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 967 0.11454360237852693 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 964 0.11418824477032054 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 941 0.11146383644073819 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 848 0.10044775058634006 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 1.1845253606879723E-4 0.0 0.0 0.0 0.0 3 1.1845253606879723E-4 0.0 0.0 0.0 0.0 4 1.1845253606879723E-4 0.0 0.0 0.0 0.0 5 2.3690507213759446E-4 0.0 0.0 0.0 0.0 6 2.3690507213759446E-4 0.0 0.0 0.0 0.0 7 2.3690507213759446E-4 0.0 0.0 0.0 0.0 8 2.3690507213759446E-4 0.0 0.0 0.0 0.0 9 2.3690507213759446E-4 0.0 0.0 0.0 0.0 10 2.3690507213759446E-4 0.0 0.0 2.3690507213759446E-4 0.0 11 2.3690507213759446E-4 0.0 0.0 5.922626803439862E-4 0.0 12 2.3690507213759446E-4 0.0 0.0 0.0010660728246191752 0.0 13 2.3690507213759446E-4 0.0 0.0 0.0010660728246191752 0.0 14 2.3690507213759446E-4 0.0 0.0 0.0014214304328255668 0.0 15 2.3690507213759446E-4 0.0 0.0 0.002013693113169553 0.0 16 2.3690507213759446E-4 0.0 0.0 0.0026059557935135392 0.0 17 2.3690507213759446E-4 0.0 0.0 0.003553576082063917 0.0 18 2.3690507213759446E-4 0.0 0.0 0.004027386226339106 0.0 19 2.3690507213759446E-4 0.0 0.0 0.004856553978820686 0.0 20 3.553576082063917E-4 0.0 0.0 0.007936319916609414 0.0 21 3.553576082063917E-4 0.0 0.0 0.013148231503636493 0.0 22 3.553576082063917E-4 0.0 0.0 0.02475658003837862 0.0 23 3.553576082063917E-4 0.0 0.0 0.030916111913956077 0.0 24 3.553576082063917E-4 0.0 0.0 0.038260169150221505 0.0 25 3.553576082063917E-4 0.0 0.0 0.043353628201179786 0.0 26 3.553576082063917E-4 0.0 0.0 0.05105304304565161 0.0 27 3.553576082063917E-4 0.0 0.0 0.11229300419321978 0.0 28 3.553576082063917E-4 0.0 0.0 0.1920115609675203 0.0 29 3.553576082063917E-4 0.0 0.0 0.28049560541091184 0.0 30 3.553576082063917E-4 0.0 0.0 0.44324938996943924 0.0 31 3.553576082063917E-4 0.0 0.0 0.6613205088720949 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2685 0.0 30.454376 1 AATTACG 40 0.0019307645 23.125002 16 ATTGGAC 270 0.0 19.87037 3 TTGGACC 415 0.0 18.72289 4 GTATTGG 320 0.0 18.5 1 CGGCATA 50 0.0070333704 18.5 36 ATTCCGT 60 9.234044E-4 18.5 6 GTATCAA 4510 0.0 18.0898 2 TGGACCC 465 0.0 17.903225 5 GGACCCT 430 0.0 17.639534 6 TGCGGAC 70 0.0025917287 15.857143 22 TATACTG 105 9.337144E-6 15.857142 5 GTGGTAT 385 0.0 15.376623 1 TAGGTTA 135 3.9681981E-7 15.074075 33 AGGTTAC 135 3.9681981E-7 15.074075 34 GACCCTC 495 0.0 14.949495 7 AGGTAAT 75 0.004103206 14.8 1 AGTGCGG 75 0.004103206 14.8 20 TAGGACA 100 1.09281704E-4 14.8 4 ATACTGC 125 2.956309E-6 14.799999 6 >>END_MODULE