##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088301_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 871745 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.66026532988431 31.0 30.0 31.0 27.0 34.0 2 30.958233198928585 31.0 31.0 34.0 27.0 34.0 3 30.994866618105064 31.0 31.0 34.0 27.0 34.0 4 34.89857928637388 35.0 35.0 37.0 32.0 37.0 5 34.61763244985632 35.0 35.0 37.0 32.0 37.0 6 34.71592495511876 35.0 35.0 37.0 31.0 37.0 7 34.53409425921571 35.0 35.0 37.0 30.0 37.0 8 34.60645486925649 35.0 35.0 37.0 30.0 37.0 9 36.04225777033422 37.0 35.0 39.0 30.0 39.0 10 35.78700766852692 37.0 35.0 39.0 30.0 39.0 11 35.926830667224934 37.0 35.0 39.0 30.0 39.0 12 35.65297764828017 37.0 35.0 39.0 30.0 39.0 13 35.76115836626536 37.0 35.0 39.0 30.0 39.0 14 36.53139392827031 38.0 35.0 40.0 30.0 41.0 15 36.648549747919404 38.0 35.0 40.0 30.0 41.0 16 36.6007639848809 38.0 35.0 40.0 30.0 41.0 17 36.673259955606284 38.0 36.0 40.0 31.0 41.0 18 36.68108907994884 38.0 36.0 40.0 31.0 41.0 19 36.78100591342652 39.0 36.0 40.0 30.0 41.0 20 36.745958967358575 39.0 35.0 40.0 30.0 41.0 21 36.672746043854566 38.0 35.0 40.0 30.0 41.0 22 36.598132481402246 38.0 35.0 40.0 30.0 41.0 23 36.479167646502134 38.0 35.0 40.0 30.0 41.0 24 36.39129332545641 38.0 35.0 40.0 30.0 41.0 25 36.258221154121905 38.0 34.0 40.0 30.0 41.0 26 35.99325490825872 38.0 34.0 40.0 29.0 41.0 27 35.84056461465222 38.0 34.0 40.0 29.0 41.0 28 35.66999523943355 38.0 34.0 40.0 27.0 41.0 29 35.46222347131329 38.0 34.0 40.0 27.0 41.0 30 35.249254082329124 38.0 34.0 40.0 27.0 41.0 31 35.01619854429908 37.0 33.0 40.0 26.0 41.0 32 34.896438752158026 37.0 33.0 40.0 26.0 41.0 33 34.714080379009914 37.0 33.0 40.0 25.0 41.0 34 34.87943607362245 37.0 33.0 40.0 25.0 41.0 35 34.81833219576826 37.0 33.0 40.0 25.0 41.0 36 34.76139237965231 37.0 33.0 40.0 25.0 41.0 37 34.65446776293526 37.0 33.0 40.0 25.0 41.0 38 34.63140482595254 37.0 33.0 40.0 24.0 41.0 39 34.525439205272185 37.0 33.0 40.0 24.0 41.0 40 34.3420920108518 37.0 33.0 40.0 23.0 41.0 41 34.228881152171795 37.0 33.0 40.0 23.0 41.0 42 34.06754842299067 37.0 33.0 40.0 22.0 41.0 43 33.67842201561236 37.0 32.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 3.0 16 11.0 17 39.0 18 103.0 19 234.0 20 500.0 21 949.0 22 1709.0 23 3020.0 24 4843.0 25 7262.0 26 10815.0 27 15261.0 28 20699.0 29 27097.0 30 33942.0 31 40852.0 32 49372.0 33 58022.0 34 68890.0 35 80566.0 36 97758.0 37 119658.0 38 139283.0 39 90854.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.054195894441605 24.000022942488915 14.864667993507275 22.0811131695622 2 19.487923647396887 24.961083803176386 34.464550986813805 21.08644156261292 3 20.53341286729491 26.142277845012018 32.68421384693919 20.64009544075389 4 14.61872451232872 17.672484499480927 36.17089859993462 31.537892388255738 5 11.905201635799461 39.5624867363736 35.55741644632318 12.974895181503765 6 31.21600926876552 38.52927174804559 13.908998617715044 16.34572036547385 7 24.305961032182577 34.48061072905494 22.503140253170365 18.710287985592117 8 25.913197093186653 35.56992010278235 19.721134047227114 18.79574875680388 9 24.145707747104943 14.57306895938606 22.798524797962706 38.482698495546295 10 15.758163224337393 28.19976025099083 34.802264423656 21.23981210101578 11 32.347303397209046 22.98619435729485 24.342324877114294 20.32417736838181 12 20.31913002082031 27.840710299456838 31.81010501924301 20.03005466047984 13 30.919248174638227 21.661724472179365 27.61839758186167 19.80062977132074 14 19.880813770081847 23.543696837951465 28.919580840727505 27.655908551239182 15 21.669410205966194 30.43871774429449 26.614319554456866 21.27755249528245 16 20.857819660565877 29.09681156760291 27.930530143562628 22.114838628268586 17 20.75538144755634 27.658088087686195 28.19436876609559 23.39216169866188 18 22.06574170198854 26.029171374656578 31.024554198762257 20.880532724592626 19 21.73651698604523 25.243391129286664 32.45513309511382 20.564958789554286 20 22.593304234609892 25.018210600577 32.34432087364998 20.044164291163128 21 21.720227818914935 25.583628239909608 32.84228759556981 19.853856345605653 22 20.070662865861003 26.039954344447057 32.29453567270245 21.594847116989488 23 21.29602119885976 26.2943865465245 33.20420535821829 19.205386896397457 24 21.101010043074524 26.085036335166823 31.095790626846153 21.718162994912504 25 21.087129837280397 26.58024995841674 31.91254323225255 20.420076972050314 26 20.683800882138698 27.31773626461867 31.76720256497026 20.231260288272374 27 19.768510286838467 27.348249774876827 31.44646656992584 21.436773368358867 28 20.397593332912724 26.77801421287188 31.724988385364988 21.099404068850408 29 20.595013450034127 26.489512414754312 30.95435018267957 21.96112395253199 30 20.793351266712172 26.916242708590243 32.312201389167704 19.978204635529888 31 21.645550017493647 26.463243264945596 32.11868149516201 19.77252522239875 32 20.97402336692496 26.644718352270445 31.14477284068162 21.23648544012297 33 20.75756098400335 26.692324016770957 31.685412591985042 20.86470240724065 34 19.940464241263214 27.160924352878425 32.49390590138171 20.404705504476652 35 19.56179846170612 29.05184428932773 31.248243465692376 20.138113783273777 36 21.802247216789315 26.86875175653431 30.746491233101423 20.582509793574957 37 20.929514938428095 27.703284790850535 30.797423558494742 20.569776712226627 38 20.871241016581685 26.264905448267555 31.8331622206035 21.03069131454726 39 20.219674331369838 26.10855238630563 32.55860372012458 21.113169562199953 40 19.119696700296533 26.656419021617562 31.961525446088018 22.26235883199789 41 20.76478786801186 25.729771894303955 31.98699160878468 21.518448628899506 42 19.422537553986544 27.935233353790384 31.252143688808083 21.39008540341499 43 20.01043883245674 27.758690901582455 30.346718363741694 21.884151902219113 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 106.5 2 132.0 3 300.0 4 468.0 5 468.0 6 885.0 7 1302.0 8 1435.0 9 1568.0 10 2450.0 11 3332.0 12 3332.0 13 6549.5 14 9767.0 15 16171.5 16 22576.0 17 21711.0 18 20846.0 19 20846.0 20 22848.5 21 24851.0 22 20791.5 23 16732.0 24 18294.0 25 19856.0 26 19856.0 27 21770.5 28 23685.0 29 25334.5 30 26984.0 31 29473.5 32 31963.0 33 31963.0 34 35126.5 35 38290.0 36 41146.0 37 44002.0 38 46170.0 39 48338.0 40 48338.0 41 49572.0 42 50806.0 43 52258.0 44 53710.0 45 56140.0 46 58570.0 47 58570.0 48 74682.5 49 90795.0 50 83213.5 51 75632.0 52 67080.0 53 58528.0 54 58528.0 55 50645.0 56 42762.0 57 35641.5 58 28521.0 59 25327.0 60 22133.0 61 22133.0 62 19771.5 63 17410.0 64 15019.5 65 12629.0 66 10813.5 67 8998.0 68 8998.0 69 7563.0 70 6128.0 71 5244.0 72 4360.0 73 3487.5 74 2615.0 75 2615.0 76 2105.0 77 1595.0 78 1223.5 79 852.0 80 652.5 81 453.0 82 453.0 83 344.0 84 235.0 85 186.5 86 138.0 87 94.5 88 51.0 89 51.0 90 43.5 91 36.0 92 22.0 93 8.0 94 5.0 95 2.0 96 2.0 97 3.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 871745.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.199930602292156 #Duplication Level Percentage of deduplicated Percentage of total 1 82.87058527196628 46.5732114125584 2 9.923215401235536 11.15368033802068 3 2.9030023989780043 4.894456000825544 4 1.260259348112908 2.8330595161934156 5 0.6968952180369682 1.9582731445373436 6 0.42334799404000545 1.4275276731400741 7 0.29925194759420853 1.1772557081176704 8 0.22201778298537103 0.9981907197002091 9 0.17387621455443425 0.8794648072213621 >10 1.0870025795278837 11.266925174472215 >50 0.08919744128448075 3.3924209611871494 >100 0.041528787030306394 4.416043011849822 >500 0.005932683853240409 2.2195186221610266 >1k 0.0032732048845464327 3.400617550182794 >5k 2.0457530528415204E-4 0.9617339173466453 >10k+ 4.091506105683041E-4 2.447621442485682 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 10695 1.2268495947782894 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 10594 1.2152636378757549 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 8365 0.9595695989079376 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3585 0.4112441138176875 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 2757 0.31626220970582 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 2738 0.3140826732588085 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2567 0.2944668452357054 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2555 0.2930902959007508 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2409 0.2763422789921365 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2318 0.2659034465353974 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 1375 0.15772961129688154 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1327 0.15222341395706313 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1286 0.14752020372930158 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1209 0.1386873454966762 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1177 0.1350165472701306 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1141 0.13088689926526678 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1085 0.12446300236881198 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1045 0.11987450458562997 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1004 0.11517129435786842 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 900 0.1032412001215952 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 880 0.10094695123000419 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 1.1471244457955021E-4 0.0 0.0 0.0 0.0 3 1.1471244457955021E-4 0.0 0.0 0.0 0.0 4 1.1471244457955021E-4 0.0 0.0 0.0 0.0 5 1.1471244457955021E-4 0.0 0.0 0.0 0.0 6 1.1471244457955021E-4 0.0 0.0 0.0 0.0 7 1.1471244457955021E-4 0.0 0.0 0.0 0.0 8 1.1471244457955021E-4 0.0 0.0 0.0 0.0 9 1.1471244457955021E-4 0.0 0.0 0.0 0.0 10 1.1471244457955021E-4 0.0 0.0 5.73562222897751E-4 0.0 11 1.1471244457955021E-4 0.0 0.0 8.029871120568514E-4 0.0 12 1.1471244457955021E-4 0.0 0.0 9.176995566364017E-4 0.0 13 1.1471244457955021E-4 0.0 0.0 0.001032412001215952 0.0 14 1.1471244457955021E-4 0.0 0.0 0.0012618368903750522 0.0 15 1.1471244457955021E-4 0.0 0.0 0.0013765493349546026 0.0 16 1.1471244457955021E-4 0.0 0.0 0.0019501115578523535 0.0 17 1.1471244457955021E-4 0.0 0.0 0.002753098669909205 0.0 18 1.1471244457955021E-4 0.0 0.0 0.0033266608928069564 0.0 19 1.1471244457955021E-4 0.0 0.0 0.004129648004863808 0.0 20 1.1471244457955021E-4 0.0 0.0 0.006538609341034362 0.0 21 2.2942488915910042E-4 0.0 0.0 0.012159519125432323 0.0 22 2.2942488915910042E-4 0.0 0.0 0.02053352757973949 0.0 23 2.2942488915910042E-4 0.0 0.0 0.025351450252080597 0.0 24 2.2942488915910042E-4 0.0 0.0 0.03246362181601271 0.0 25 2.2942488915910042E-4 0.0 0.0 0.034987295596762814 0.0 26 2.2942488915910042E-4 0.0 0.0 0.04347601649564953 0.0 27 2.2942488915910042E-4 0.0 0.0 0.10427361212281114 0.0 28 2.2942488915910042E-4 0.0 0.0 0.17665716465250733 0.0 29 2.2942488915910042E-4 0.0 0.0 0.26257678564259046 0.0 30 2.2942488915910042E-4 0.0 0.0 0.40860572759235786 0.0 31 2.2942488915910042E-4 0.0 0.0 0.6186442136175143 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2560 0.0 31.291018 1 CGAGACG 25 0.0054956255 29.599998 31 GCCGAGT 75 3.7386235E-7 22.2 12 TGCGGTC 45 0.0038250773 20.555557 12 TTGGACC 400 0.0 19.887499 4 GGACCCT 410 0.0 19.402441 6 TAAACGT 70 1.21876816E-4 18.5 4 CGCTGAA 80 1.61594E-5 18.5 26 CGGGCGA 70 1.21876816E-4 18.5 28 AACGAGA 70 1.21876816E-4 18.5 36 ATAAGAC 60 9.2343724E-4 18.5 3 GCGATCT 80 1.61594E-5 18.5 28 CGCAAAT 70 1.21876816E-4 18.5 17 TACACTC 90 2.1510023E-6 18.5 5 GTCAATC 50 0.007033554 18.499998 16 GTAACAC 50 0.007033554 18.499998 3 TGGACCC 465 0.0 18.301075 5 GTATTGG 265 0.0 18.150944 1 GACCCTC 460 0.0 18.097824 7 GTATCAA 4495 0.0 17.86207 2 >>END_MODULE