##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088295_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3454335 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.915742682745016 31.0 31.0 33.0 28.0 34.0 2 31.221744851035005 31.0 31.0 34.0 28.0 34.0 3 31.27780513470755 31.0 31.0 34.0 28.0 34.0 4 35.17016791944035 35.0 35.0 37.0 33.0 37.0 5 34.934763420455745 35.0 35.0 37.0 32.0 37.0 6 34.9868261184859 36.0 35.0 37.0 32.0 37.0 7 34.7959980719878 35.0 35.0 37.0 32.0 37.0 8 34.86576634866045 35.0 35.0 37.0 32.0 37.0 9 36.32349641826864 38.0 35.0 39.0 32.0 39.0 10 36.136798833928964 38.0 35.0 39.0 31.0 39.0 11 36.23526872755538 38.0 35.0 39.0 32.0 39.0 12 35.982909879904525 38.0 35.0 39.0 30.0 39.0 13 36.07532274663575 38.0 35.0 39.0 31.0 39.0 14 36.87830248079587 39.0 36.0 40.0 31.0 41.0 15 36.99705587327228 38.0 36.0 40.0 31.0 41.0 16 36.96521645989749 38.0 36.0 40.0 31.0 41.0 17 37.068597863264564 39.0 36.0 40.0 31.0 41.0 18 37.08163713131471 39.0 36.0 40.0 31.0 41.0 19 37.17541784453448 39.0 36.0 40.0 31.0 41.0 20 37.156306785531804 39.0 36.0 40.0 31.0 41.0 21 37.086698018576655 39.0 36.0 40.0 31.0 41.0 22 37.01974562397683 39.0 36.0 40.0 31.0 41.0 23 36.90943437738378 39.0 35.0 40.0 31.0 41.0 24 36.82178682727645 39.0 35.0 40.0 30.0 41.0 25 36.69246931753869 38.0 35.0 40.0 30.0 41.0 26 36.44943788022876 38.0 35.0 40.0 30.0 41.0 27 36.317019339467656 38.0 35.0 40.0 30.0 41.0 28 36.14830437696402 38.0 35.0 40.0 30.0 41.0 29 35.92565052318319 38.0 34.0 40.0 29.0 41.0 30 35.70487633654524 38.0 34.0 40.0 28.0 41.0 31 35.43496157726451 38.0 34.0 40.0 27.0 41.0 32 35.322703212050946 38.0 34.0 40.0 27.0 41.0 33 35.123563001272316 37.0 33.0 40.0 27.0 41.0 34 35.2568372783763 38.0 34.0 40.0 27.0 41.0 35 35.14725294448859 38.0 33.0 40.0 26.0 41.0 36 35.062525493329396 38.0 33.0 40.0 25.0 41.0 37 34.933053974209216 38.0 33.0 40.0 25.0 41.0 38 34.87093753211544 38.0 33.0 40.0 25.0 41.0 39 34.744692972742946 38.0 33.0 40.0 24.0 41.0 40 34.525605073045895 38.0 33.0 40.0 23.0 41.0 41 34.38159327337968 38.0 33.0 40.0 23.0 41.0 42 34.193726723088524 38.0 33.0 40.0 22.0 41.0 43 33.82080950457903 37.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 3.0 13 2.0 14 7.0 15 8.0 16 46.0 17 129.0 18 298.0 19 705.0 20 1502.0 21 2960.0 22 5327.0 23 9550.0 24 15709.0 25 24763.0 26 37057.0 27 52971.0 28 73615.0 29 97328.0 30 123712.0 31 148382.0 32 180439.0 33 215693.0 34 256505.0 35 303406.0 36 371297.0 37 467895.0 38 552162.0 39 512864.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.447495682960685 22.656256558787728 14.763941540122774 22.132306218128814 2 18.182139254009815 24.16285623716287 36.318828370728376 21.33617613809894 3 19.601023062326036 25.330606325095857 34.087921408896364 20.98044920368175 4 13.040860252407482 16.288026494245635 36.86509849218446 33.80601476116242 5 11.586542706483304 39.09586070835631 35.66721235780548 13.650384227354904 6 31.12454350837426 37.6530359678491 13.267937244071579 17.954483279705066 7 24.04048825606086 34.96337211069569 21.75124879318306 19.24489084006039 8 26.273016369286704 34.60761622714647 19.474689050135556 19.64467835343127 9 23.56876214958885 14.528266656244979 23.740922637787012 38.162048556379155 10 15.786598578308125 27.66795924541193 34.514892157245896 22.030550019034052 11 31.479401968830466 22.53432281466621 25.27872948049335 20.70754573600997 12 21.079715777421704 27.34566855849245 31.893953539538 19.68066212454785 13 31.62889528664707 21.432547798635625 28.15010703941569 18.788449875301612 14 19.81322020012535 23.665191708389603 29.2296491220452 27.29193896943985 15 20.962240199633214 30.004993725275632 27.733384283805712 21.299381791285445 16 20.463880891691165 29.469087393087236 28.212145029361658 21.85488668585994 17 20.472941970017384 26.799456335300427 27.987297120864074 24.740304573818115 18 22.73511399444466 25.099563302343284 31.86665450803121 20.298668195180838 19 21.7241524056005 24.240526758406467 33.268371481052064 20.766949354940966 20 23.164603317281042 23.48724139378491 33.45046152153743 19.897693767396618 21 21.840730560295977 24.592866644375835 34.112036035879555 19.454366759448636 22 19.49454815470995 25.03662788930431 33.628672378330414 21.840151577655323 23 21.235925293869876 25.371771990846288 35.024860067133034 18.367442648150803 24 21.071031037811906 24.9989361193978 31.820249049382877 22.109783793407413 25 20.737363342003597 26.035836130543217 32.95331807714075 20.273482450312432 26 20.444021787116768 26.914413338602078 32.75753509720395 19.88402977707721 27 18.72250375253124 27.158772962089667 32.46986757219552 21.64885571318358 28 19.922126834832174 26.083833791453348 32.457998428062126 21.536040945652346 29 19.912197282544977 25.989835959743335 31.43345969629466 22.66450706141703 30 20.4201098040578 26.296349369705023 33.72701257984532 19.556528246391853 31 21.85202072178871 25.842079589848698 33.24364892229619 19.06225076606641 32 20.98927868895171 25.985956776050962 31.73241738279582 21.29234715220151 33 20.49135361799015 25.926205767535578 32.746013342654955 20.83642727181932 34 19.177844650272775 26.98777043917281 33.56486849133046 20.269516419223958 35 18.617071013668333 29.896550276681328 31.64279087002274 19.8435878396276 36 21.86328193414941 26.66979317292619 31.28170834617951 20.18521654674489 37 20.79804072274403 27.83305614539412 31.176333505580665 20.19256962628118 38 20.578258912352158 25.737544274078804 32.662871435457184 21.02132537811185 39 20.03048343603038 25.42086971877366 33.532561259982025 21.016085585213943 40 18.24611683580197 26.332101547765348 32.89568035526374 22.526101261168936 41 20.66701695116426 25.20791990354149 32.821657424656266 21.30340572063798 42 18.791171093712684 28.166173807693813 31.980916732164076 21.061738366429427 43 19.39079446550494 28.436442904350624 30.41326333433208 21.75949929581236 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 244.0 1 374.0 2 504.0 3 1445.0 4 2386.0 5 2386.0 6 4242.0 7 6098.0 8 6769.0 9 7440.0 10 11655.5 11 15871.0 12 15871.0 13 29800.0 14 43729.0 15 73596.5 16 103464.0 17 101508.5 18 99553.0 19 99553.0 20 104323.5 21 109094.0 22 88648.5 23 68203.0 24 73993.0 25 79783.0 26 79783.0 27 85203.5 28 90624.0 29 93577.0 30 96530.0 31 103595.0 32 110660.0 33 110660.0 34 121054.5 35 131449.0 36 142541.5 37 153634.0 38 159956.5 39 166279.0 40 166279.0 41 171572.5 42 176866.0 43 183283.0 44 189700.0 45 207825.0 46 225950.0 47 225950.0 48 324240.5 49 422531.0 50 381803.5 51 341076.0 52 299593.0 53 258110.0 54 258110.0 55 217720.5 56 177331.0 57 142632.5 58 107934.0 59 94418.0 60 80902.0 61 80902.0 62 70541.5 63 60181.0 64 51942.5 65 43704.0 66 36945.0 67 30186.0 68 30186.0 69 25503.0 70 20820.0 71 17314.5 72 13809.0 73 11266.5 74 8724.0 75 8724.0 76 6898.0 77 5072.0 78 3883.5 79 2695.0 80 2136.0 81 1577.0 82 1577.0 83 1199.5 84 822.0 85 632.0 86 442.0 87 328.5 88 215.0 89 215.0 90 162.5 91 110.0 92 67.0 93 24.0 94 14.0 95 4.0 96 4.0 97 4.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3454335.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.43649770051816 #Duplication Level Percentage of deduplicated Percentage of total 1 72.03101719568852 26.965890096123772 2 14.078820915318124 10.541234936446278 3 5.49457479645634 6.170929101985885 4 2.6796473992752565 4.012664548046704 5 1.5225856712813326 2.850013749088275 6 0.8827866026687186 1.9829063172513435 7 0.604068702001276 1.5829951601398031 8 0.41047689514870317 1.229345387308021 9 0.3053083072490493 1.0286706368050311 >10 1.6710010103958344 11.904558616677544 >50 0.17223940644161828 4.546379951785143 >100 0.12903451054725837 9.229076707621715 >500 0.00988059331686142 2.574584372841909 >1k 0.007001995263855368 6.081857050221821 >5k 7.779994737617073E-4 2.0005484050886486 >10k+ 7.779994737617073E-4 7.298344962568226 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 49640 1.437034914100688 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 49193 1.4240946520820938 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 43926 1.2716195736661324 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 16965 0.4911220249338874 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 16201 0.46900488806094376 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15985 0.46275187554189157 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 15219 0.44057684040488254 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 14986 0.4338316926412754 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 14746 0.42688390095343964 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 13721 0.3972110406199746 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 8720 0.25243643132469784 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 8714 0.2522627365325019 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 7637 0.2210845213333391 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 7306 0.21150235863053235 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 6754 0.1955224377485102 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6571 0.19022474658653546 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 5969 0.17279736910288088 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5945 0.1721025899340973 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 5608 0.16234673243909464 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 5463 0.15814910829436057 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4927 0.14263237352486077 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4842 0.14017169730208565 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4664 0.13501875180027414 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 4574 0.13241332991733573 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 4260 0.12332330245908403 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4076 0.11799666216507664 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 3963 0.11472541024538732 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 3869 0.11200419183431831 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 3803 0.1100935491201635 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 3794 0.10983300693186966 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3625 0.104940603618352 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3610 0.10450636663786228 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3566 0.10323260482842574 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3561 0.10308785916826248 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3500 0.1013219621142709 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 3490 0.10103247079394442 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 5.7898264065297664E-5 0.0 5 0.0 0.0 0.0 5.7898264065297664E-5 0.0 6 2.8949132032648832E-5 0.0 0.0 5.7898264065297664E-5 0.0 7 2.8949132032648832E-5 0.0 0.0 1.7369479219589299E-4 0.0 8 2.8949132032648832E-5 0.0 0.0 2.026439242285418E-4 0.0 9 2.8949132032648832E-5 0.0 0.0 2.3159305626119066E-4 0.0 10 2.8949132032648832E-5 0.0 0.0 2.894913203264883E-4 0.0 11 2.8949132032648832E-5 0.0 0.0 6.947791687835719E-4 0.0 12 2.8949132032648832E-5 0.0 0.0 0.0011579652813059533 0.0 13 2.8949132032648832E-5 0.0 0.0 0.0014764057336650903 0.0 14 2.8949132032648832E-5 0.0 0.0 0.00173694792195893 0.0 15 2.8949132032648832E-5 0.0 0.0 0.0021711849024486623 0.0 16 8.684739609794649E-5 0.0 0.0 0.0031265062595260736 0.0 17 8.684739609794649E-5 0.0 0.0 0.004255522408799378 0.0 18 8.684739609794649E-5 0.0 0.0 0.00495030157758295 0.0 19 8.684739609794649E-5 0.0 0.0 0.006021419462790957 0.0 20 8.684739609794649E-5 0.0 0.0 0.009813755759067953 0.0 21 8.684739609794649E-5 0.0 0.0 0.017977410992274925 0.0 22 8.684739609794649E-5 0.0 0.0 0.029383369013138563 0.0 23 8.684739609794649E-5 0.0 0.0 0.03636010983300693 0.0 24 8.684739609794649E-5 0.0 0.0 0.04579752687565045 0.0 25 8.684739609794649E-5 0.0 0.0 0.051384709357951676 0.0 26 8.684739609794649E-5 0.0 0.0 0.06125636338108493 0.0 27 8.684739609794649E-5 0.0 0.0 0.136350411873776 0.0 28 8.684739609794649E-5 0.0 0.0 0.23460376599258612 0.0 29 8.684739609794649E-5 0.0 0.0 0.3480264652965043 0.0 30 8.684739609794649E-5 0.0 0.0 0.5460964266638876 0.0 31 8.684739609794649E-5 0.0 0.0 0.8159023372081746 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 11955 0.0 31.073193 1 GTATTGG 1240 0.0 24.616936 1 ATTGGAC 1275 0.0 23.07059 3 TTGGACC 2180 0.0 19.942661 4 GGACCCT 2290 0.0 18.580788 6 TATTGGA 1615 0.0 18.442724 2 TGGACCC 2360 0.0 17.87288 5 GACCCTC 2310 0.0 17.77922 7 GTATCAA 21800 0.0 17.125229 2 CGTATTA 90 4.450112E-5 16.444445 15 ATTAGAC 365 0.0 15.712329 3 TTTTTAC 2595 0.0 15.612717 1 ACCGTCG 145 5.3552867E-8 15.310345 23 CGAATTA 235 0.0 14.957446 15 ACGTTTA 175 2.242814E-9 14.8 26 ACCCTCG 2825 0.0 14.669026 8 CGTAGAC 90 8.2799396E-4 14.388888 3 GATACTG 1445 0.0 14.3391 36 TGATACT 1435 0.0 14.310104 35 TGCGCTA 235 3.6379788E-12 14.170212 10 >>END_MODULE