##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088294_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3503900 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.926560689517395 31.0 31.0 33.0 28.0 34.0 2 31.232544022375066 31.0 31.0 34.0 28.0 34.0 3 31.278045320928108 31.0 31.0 34.0 28.0 34.0 4 35.173297183138786 35.0 35.0 37.0 33.0 37.0 5 34.951911013442164 35.0 35.0 37.0 32.0 37.0 6 35.01731470646993 36.0 35.0 37.0 32.0 37.0 7 34.80754359428066 35.0 35.0 37.0 32.0 37.0 8 34.88931619053055 36.0 35.0 37.0 32.0 37.0 9 36.32966751334227 38.0 35.0 39.0 32.0 39.0 10 36.15556094637404 38.0 35.0 39.0 31.0 39.0 11 36.25412112217814 38.0 35.0 39.0 32.0 39.0 12 35.995100602186135 38.0 35.0 39.0 30.0 39.0 13 36.08293101972088 38.0 35.0 39.0 31.0 39.0 14 36.85724506977939 38.0 36.0 40.0 31.0 41.0 15 36.98679357287594 38.0 36.0 40.0 31.0 41.0 16 36.95733240103884 38.0 36.0 40.0 31.0 41.0 17 37.084419646679414 39.0 36.0 40.0 31.0 41.0 18 37.10777105511002 39.0 36.0 40.0 31.0 41.0 19 37.20721538856702 39.0 36.0 40.0 31.0 41.0 20 37.19680384714176 39.0 36.0 40.0 31.0 41.0 21 37.1154065469905 39.0 36.0 40.0 31.0 41.0 22 37.04031022574845 39.0 36.0 40.0 31.0 41.0 23 36.90901138731128 39.0 35.0 40.0 31.0 41.0 24 36.82404006963669 39.0 35.0 40.0 30.0 41.0 25 36.69920545677673 38.0 35.0 40.0 30.0 41.0 26 36.44337281315106 38.0 35.0 40.0 30.0 41.0 27 36.31815519849311 38.0 35.0 40.0 30.0 41.0 28 36.13195467907189 38.0 35.0 40.0 30.0 41.0 29 35.900124147378634 38.0 34.0 40.0 29.0 41.0 30 35.64384086303833 38.0 34.0 40.0 28.0 41.0 31 35.339482861953826 38.0 34.0 40.0 27.0 41.0 32 35.22411940980051 37.0 34.0 40.0 27.0 41.0 33 35.011383886526446 37.0 33.0 40.0 27.0 41.0 34 35.10953566026428 37.0 33.0 40.0 27.0 41.0 35 34.982912754359425 37.0 33.0 40.0 26.0 41.0 36 34.89143639944062 38.0 33.0 40.0 25.0 41.0 37 34.739496560974914 37.0 33.0 40.0 25.0 41.0 38 34.648981706098915 38.0 33.0 40.0 24.0 41.0 39 34.50122121065099 38.0 33.0 40.0 23.0 41.0 40 34.258658637518195 38.0 33.0 40.0 22.0 41.0 41 34.084991580809955 37.0 33.0 40.0 21.0 41.0 42 33.85316333228688 37.0 33.0 40.0 20.0 41.0 43 33.4603253517509 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 9.0 15 14.0 16 41.0 17 131.0 18 325.0 19 803.0 20 1637.0 21 3234.0 22 5824.0 23 10342.0 24 16565.0 25 25619.0 26 38372.0 27 55613.0 28 76550.0 29 101396.0 30 128127.0 31 152529.0 32 183350.0 33 220187.0 34 261965.0 35 309116.0 36 379234.0 37 484526.0 38 551522.0 39 496865.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.8322726105197 22.496903450440936 14.991495191072804 21.67932874796655 2 18.35571791432404 24.17720254573475 36.24920802534319 21.21787151459802 3 19.88875253289192 25.220868175461632 34.246981934415935 20.643397357230516 4 12.946602357373212 16.158623248380376 36.45032677873227 34.44444761551414 5 11.44778675190502 39.198578726561834 35.509346727931735 13.844287793601415 6 31.269414081452098 37.04640543394503 12.914010103028053 18.770170381574815 7 23.831016866919718 35.09620708353549 21.438283056023288 19.634492993521505 8 26.66651445532121 34.22258055309798 19.15448500242587 19.95641998915494 9 23.206969376979934 14.535489026513313 23.94055195639145 38.3169896401153 10 16.023459573617966 27.54113987271326 34.153514655098604 22.281885898570163 11 31.156882331116755 22.265361454379406 25.46488198864123 21.112874225862612 12 21.373926196523875 27.46773595136848 31.685379148948318 19.47295870315934 13 32.40594765832358 21.008504808927196 28.325637147178856 18.259910385570365 14 19.75378863552042 23.7481092496932 29.40255144267816 27.09555067210822 15 20.691172693284628 29.846257027883215 28.16073518079854 21.30183509803362 16 20.28134364565199 29.14064328319872 28.646650874739578 21.931362196409715 17 20.479437198550187 26.419475441650732 27.882844830046523 25.218242529752562 18 23.056936556408573 24.413596278432603 32.25528696595222 20.274180199206597 19 21.596192813721853 23.666542994948486 33.949770256000456 20.787493935329206 20 23.25594337737949 22.820171808556182 34.14834898256229 19.77553583150204 21 21.823910499728875 23.979679785382004 34.99289363280916 19.203516082079968 22 19.270099032506636 24.453837152886784 34.282114215588344 21.993949599018237 23 21.21047975113445 24.932189845600618 35.88019064471018 17.977139758554753 24 20.967892919318473 24.455492451268587 32.42418448015069 22.15243014926225 25 20.55301235765861 25.745683381375038 33.60906418562173 20.092240075344616 26 20.292331402151888 26.57139187762208 33.433145923114246 19.70313079711179 27 18.29421501755187 26.846941978937757 33.14860583920774 21.710237164302633 28 19.663803190730327 25.75284682782043 33.05299808784497 21.53035189360427 29 19.73720711207512 25.730585918547906 31.828990553383374 22.70321641599361 30 20.22620508576158 26.045520705499587 34.513855989040785 19.21441821969805 31 21.82582265475613 25.39561631325095 34.00582208396358 18.77273894802934 32 20.98784211878193 25.63158195153971 32.078826450526556 21.301749479151802 33 20.309654955906275 25.57812722965838 33.186106909443765 20.926110904991578 34 18.811467222238075 26.999372128200005 34.16179114700762 20.027369502554297 35 18.25908273637946 30.194954193898226 32.072718970290246 19.473244099432062 36 21.772367932874797 26.475470190359314 31.72305145694797 20.029110419817915 37 20.715317217957132 27.992522617654615 31.34024943634236 19.951910728045892 38 20.41236907445989 25.522103941322527 33.16755615171666 20.897970832500928 39 19.89280515996461 25.165558377807585 34.03176460515426 20.909871857073547 40 17.819658095265275 26.24181626187962 33.27994520391564 22.658580438939467 41 20.71146436827535 25.002939581609063 33.078912069408375 21.20668398070721 42 18.690230885584636 28.170210337052996 32.19523959017096 20.944319187191414 43 19.247067553297754 28.66066383173036 30.37675161962385 21.715516995348043 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 313.0 1 384.0 2 455.0 3 1506.0 4 2557.0 5 2557.0 6 4614.5 7 6672.0 8 7560.0 9 8448.0 10 13436.5 11 18425.0 12 18425.0 13 34757.0 14 51089.0 15 85294.5 16 119500.0 17 115254.0 18 111008.0 19 111008.0 20 115716.0 21 120424.0 22 95251.0 23 70078.0 24 73816.5 25 77555.0 26 77555.0 27 80959.5 28 84364.0 29 86824.5 30 89285.0 31 94765.0 32 100245.0 33 100245.0 34 109020.0 35 117795.0 36 128648.5 37 139502.0 38 145543.5 39 151585.0 40 151585.0 41 157535.5 42 163486.0 43 172143.5 44 180801.0 45 206099.0 46 231397.0 47 231397.0 48 346164.5 49 460932.0 50 416415.0 51 371898.0 52 325908.5 53 279919.0 54 279919.0 55 232901.0 56 185883.0 57 145830.0 58 105777.0 59 90594.0 60 75411.0 61 75411.0 62 65702.5 63 55994.0 64 48472.5 65 40951.0 66 35133.0 67 29315.0 68 29315.0 69 24662.5 70 20010.0 71 16814.5 72 13619.0 73 11176.5 74 8734.0 75 8734.0 76 6911.0 77 5088.0 78 3828.5 79 2569.0 80 2008.0 81 1447.0 82 1447.0 83 1049.5 84 652.0 85 535.0 86 418.0 87 295.5 88 173.0 89 173.0 90 132.0 91 91.0 92 56.5 93 22.0 94 15.0 95 8.0 96 8.0 97 6.0 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3503900.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.41739342952501 #Duplication Level Percentage of deduplicated Percentage of total 1 71.32974870447465 23.836542756865818 2 13.724575203633826 9.172790584658701 3 5.497121084704059 5.510983740518785 4 2.7863461028343766 3.7244969579696052 5 1.596676370653487 2.6678381228876846 6 0.9875461857266399 1.9800731650952346 7 0.6791464506443025 1.5886712896212307 8 0.49217564045038464 1.3157781610687163 9 0.35696869872670745 1.0736067102638371 >10 2.1563129300062003 13.826272452970564 >50 0.22278899654593196 5.164467304440212 >100 0.14760834775722537 9.322945925494382 >500 0.011966121550788878 2.714183942157786 >1k 0.008866982156323193 6.746550999970355 >5k 0.0011191336702155487 2.4921805135169683 >10k+ 0.0010330464648143525 8.862617372500125 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 57837 1.6506464225577215 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 57239 1.6335797254487856 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 50177 1.432032877650618 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 20050 0.5722195268129798 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 18750 0.5351180113587716 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 17978 0.5130854191044265 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 17155 0.4895973058591855 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 16625 0.4744713034047775 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 16125 0.46020148976854364 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 15878 0.45315220183224403 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 10170 0.29024800936099776 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 10087 0.2878792202973829 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 8849 0.2525471617340677 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 8500 0.24258683181597648 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 7577 0.2162447558434887 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 7316 0.20879591312537457 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7213 0.20585633151631041 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 6779 0.19347013328005935 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 6487 0.18513656211649876 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 6332 0.18071291988926624 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 5814 0.16592939296212791 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5732 0.16358914352578555 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 5627 0.16059248266217643 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 5357 0.15288678329861013 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 5047 0.14403949884414508 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4754 0.13567738805331203 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 4443 0.12680156397157455 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 4408 0.12580267701703818 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4359 0.12440423528068724 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 4331 0.12360512571705815 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 4276 0.12203544621707241 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 4210 0.12015183081708952 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 4091 0.11675561517166586 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 4072 0.11621336225348897 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 4062 0.11592796598076428 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 4044 0.11541425268985987 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 4038 0.11524301492622506 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 3910 0.11158994263534919 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3887 0.11093353120808241 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 3794 0.10827934587174291 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3761 0.10733753817175147 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 3712 0.10593909643540056 No Hit GATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGA 3608 0.1029709751990639 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 3599 0.10271411855361169 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 3578 0.10211478638088986 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 2.8539627272467823E-5 0.0 0.0 0.0 0.0 3 5.7079254544935646E-5 0.0 0.0 0.0 0.0 4 5.7079254544935646E-5 0.0 0.0 2.8539627272467823E-5 0.0 5 8.561888181740346E-5 0.0 0.0 2.8539627272467823E-5 0.0 6 1.1415850908987129E-4 0.0 0.0 2.8539627272467823E-5 0.0 7 1.1415850908987129E-4 0.0 0.0 2.8539627272467823E-5 0.0 8 1.7123776363480692E-4 0.0 0.0 2.8539627272467823E-5 0.0 9 1.7123776363480692E-4 0.0 0.0 8.561888181740346E-5 0.0 10 1.9977739090727475E-4 0.0 0.0 2.853962727246782E-4 0.0 11 1.9977739090727475E-4 0.0 0.0 8.276491909015669E-4 0.0 12 1.9977739090727475E-4 0.0 0.0 0.001426981363623391 0.0 13 1.9977739090727475E-4 0.0 0.0 0.001769456890893005 0.0 14 1.9977739090727475E-4 0.0 0.0 0.0020548531636176834 0.0 15 2.2831701817974259E-4 0.0 0.0 0.0025114871999771683 0.0 16 2.2831701817974259E-4 0.0 0.0 0.0032820571363337994 0.0 17 2.568566454522104E-4 0.0 0.0 0.004766117754502126 0.0 18 2.568566454522104E-4 0.0 0.0 0.0057650047090385 0.0 19 2.853962727246782E-4 0.0 0.0 0.007363223836296698 0.0 20 2.853962727246782E-4 0.0 0.0 0.011415850908987129 0.0 21 2.853962727246782E-4 0.0 0.0 0.020234595736179684 0.0 22 2.853962727246782E-4 0.0 0.0 0.03273495248152059 0.0 23 3.4247552726961384E-4 0.0 0.0 0.040783127372356516 0.0 24 3.4247552726961384E-4 0.0 0.0 0.0502868232540883 0.0 25 3.710151545420817E-4 0.0 0.0 0.056251605354034076 0.0 26 3.710151545420817E-4 0.0 0.0 0.06809555067210822 0.0 27 3.995547818145495E-4 0.0 0.0 0.15368589286223922 0.0 28 3.995547818145495E-4 0.0 0.0 0.2602243214703616 0.0 29 3.995547818145495E-4 0.0 0.0 0.3829732583692457 0.0 30 4.5663403635948517E-4 0.0 0.0 0.6024144524672508 0.0 31 4.85173663631953E-4 0.0 0.0 0.8765661120465766 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 14210 0.0 30.099928 1 GTATTGG 1455 0.0 23.39519 1 ATTGGAC 1615 0.0 21.421053 3 TTGGACC 2505 0.0 18.536928 4 TATTGGA 1940 0.0 17.737114 2 GGACCCT 2485 0.0 17.643864 6 TGGACCC 2620 0.0 17.29962 5 GTATCAA 24940 0.0 17.253809 2 ACGTTTA 295 0.0 16.932203 26 TTTTTAC 3005 0.0 16.068218 1 GTACTAT 280 0.0 15.857142 1 GACCCTC 2755 0.0 15.847549 7 CGTTTAG 250 0.0 15.54 26 TAGACAG 225 1.8189894E-12 14.8 5 GATACCC 1760 0.0 14.505682 36 TCTACAC 460 0.0 14.478261 3 ATACCCT 1805 0.0 14.246536 37 TCACGTT 370 0.0 14.0 24 TTGATAC 4995 0.0 13.925926 34 GTATTAG 360 0.0 13.875 1 >>END_MODULE