##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088291_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1872482 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.673967493412487 31.0 30.0 31.0 28.0 34.0 2 30.939336666520692 31.0 31.0 34.0 27.0 34.0 3 30.962377208432443 31.0 31.0 34.0 27.0 34.0 4 34.85042793468776 35.0 35.0 37.0 32.0 37.0 5 34.607996765790006 35.0 35.0 37.0 32.0 37.0 6 34.708604942530826 35.0 35.0 37.0 31.0 37.0 7 34.48534885782614 35.0 35.0 37.0 30.0 37.0 8 34.59326818628964 35.0 35.0 37.0 30.0 37.0 9 35.9739212446368 37.0 35.0 39.0 30.0 39.0 10 35.770644524219726 37.0 35.0 39.0 30.0 39.0 11 35.898308768789235 37.0 35.0 39.0 30.0 39.0 12 35.63810546643439 37.0 35.0 39.0 30.0 39.0 13 35.73495980201679 37.0 35.0 39.0 30.0 39.0 14 36.44696130590307 38.0 35.0 40.0 30.0 41.0 15 36.5627925929328 38.0 35.0 40.0 30.0 41.0 16 36.49968811449189 38.0 35.0 40.0 30.0 41.0 17 36.631272823984425 38.0 35.0 40.0 30.0 41.0 18 36.65651044976667 38.0 35.0 40.0 30.0 41.0 19 36.763725365584285 39.0 35.0 40.0 30.0 41.0 20 36.74507738926195 39.0 35.0 40.0 30.0 41.0 21 36.668862504419266 38.0 35.0 40.0 30.0 41.0 22 36.586353834108955 38.0 35.0 40.0 30.0 41.0 23 36.455481548020224 38.0 35.0 40.0 30.0 41.0 24 36.364771997808255 38.0 35.0 40.0 30.0 41.0 25 36.23297153190258 38.0 34.0 40.0 30.0 41.0 26 35.931574242102194 38.0 34.0 40.0 29.0 41.0 27 35.77153318429763 38.0 34.0 40.0 29.0 41.0 28 35.57950143178947 38.0 34.0 40.0 27.0 41.0 29 35.35011231082595 38.0 34.0 40.0 27.0 41.0 30 35.08973010154437 37.0 33.0 40.0 27.0 41.0 31 34.76668720981029 37.0 33.0 40.0 25.0 41.0 32 34.647651085564505 37.0 33.0 40.0 25.0 41.0 33 34.444039515466635 37.0 33.0 40.0 25.0 41.0 34 34.53902574230353 37.0 33.0 40.0 25.0 41.0 35 34.42006385108108 37.0 33.0 40.0 25.0 41.0 36 34.317096239109375 37.0 33.0 40.0 24.0 41.0 37 34.15767948637156 37.0 33.0 40.0 24.0 41.0 38 34.061057996819194 37.0 33.0 40.0 23.0 41.0 39 33.885901706932295 37.0 33.0 40.0 22.0 41.0 40 33.64819474900159 37.0 32.0 40.0 21.0 41.0 41 33.468524664055515 37.0 32.0 40.0 19.0 41.0 42 33.233502378127 37.0 31.0 40.0 18.0 41.0 43 32.82377080260318 36.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 2.0 14 8.0 15 12.0 16 47.0 17 100.0 18 283.0 19 652.0 20 1318.0 21 2608.0 22 4497.0 23 7506.0 24 11859.0 25 18056.0 26 26416.0 27 36519.0 28 49004.0 29 63213.0 30 77565.0 31 91128.0 32 107720.0 33 126476.0 34 147695.0 35 171916.0 36 208194.0 37 255609.0 38 280657.0 39 183421.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.11915735371555 23.52070674110619 15.254672675091136 21.105463230087125 2 19.447289746977543 25.038104505143437 34.60658099784137 20.90802475003765 3 21.055209075441045 25.57151417209885 33.66446246212247 19.708814290337635 4 14.127559036615573 17.040430829241615 35.70111755413403 33.13089258000878 5 11.344461522193537 40.02783471349791 35.10250031776007 13.525203446548485 6 31.46561622488227 37.24868917298003 12.854008743475237 18.431685858662462 7 23.564231859104652 35.1557985604134 21.72186434902979 19.558105231452156 8 26.861032576014082 34.559370931202544 19.237461294688014 19.342135198095363 9 23.374857542021765 14.311219013053265 23.70116241437835 38.61276103054662 10 16.10968756976035 28.100403635388748 33.98174188056281 21.808166914288094 11 31.41584271571102 22.2842195545805 25.12136298239449 21.178574747313995 12 20.77499276361535 27.853618886590098 31.907810061725563 19.46357828806899 13 32.36517093355237 20.925114366920482 28.444919630736106 18.26479506879105 14 19.6687605007685 23.618651607865925 29.51937588719144 27.19321200417414 15 21.06375388388246 29.90901915212002 28.08454233471937 20.942684629278148 16 20.136909193252592 28.843107704106103 29.02046588431825 21.99951721832306 17 20.42396135183142 26.561483635089683 28.447643288426804 24.566911724652094 18 22.494208222028302 24.535082313207816 32.441326538786484 20.529382925977394 19 21.485546990571873 23.693632301939353 34.210155291212416 20.610665416276362 20 22.92257015020705 23.085829396490862 34.40503032872947 19.586570124572624 21 21.700769353190044 24.02287445219767 35.27216817037493 19.004188024237347 22 19.221973829387945 24.48573604445864 34.543135795163856 21.749154330989565 23 20.932804694517756 25.021121698366127 35.964885109709996 18.081188497406117 24 20.79277664618405 24.59414830155911 32.823012450854 21.790062601402845 25 20.449275346839116 25.6828103020483 33.793756094851645 20.07415825626094 26 20.39410792733922 26.587171465466692 33.60544987882393 19.41327072837015 27 18.503729274834154 26.8210321914977 33.36048090181908 21.314757631849066 28 19.67661104352405 25.879180681042595 33.424994205551776 21.019214069881578 29 19.87111224567179 25.440084337259318 32.28223288661787 22.406570530451027 30 20.172797388706538 25.94129075740114 34.639585320446336 19.24632653344598 31 21.539432688805555 25.533489774534544 34.1781122595571 18.748965277102798 32 20.87277741521681 25.71613505496982 32.35924297269614 21.05184455711724 33 20.34817958196661 25.76489386813865 33.20282918607495 20.684097363819788 34 18.96002204560578 27.116255323148636 34.182117638514015 19.741604992731574 35 18.35494279784799 30.02966116630227 32.324102447980806 19.291293587868935 36 21.724053956192904 26.571256759744553 31.963030886278215 19.74165839778433 37 20.628235678634027 28.16619866038766 31.46000869434259 19.74555696663573 38 20.584176510107973 25.710207094113592 33.12795530210704 20.577661093671395 39 19.90262122679951 25.50128652772096 34.042570235655134 20.553522009824395 40 18.13956022007154 26.49205706650318 32.96346773960978 22.404914973815504 41 20.76009275389563 25.309669198422203 32.83182428455921 21.098413763122956 42 18.9972453673787 28.294103761745106 31.80286913305442 20.90578173782178 43 19.612097739791356 28.560488164906257 30.22656559582415 21.600848499478232 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 146.0 1 205.5 2 265.0 3 691.0 4 1117.0 5 1117.0 6 2147.5 7 3178.0 8 3679.5 9 4181.0 10 6896.5 11 9612.0 12 9612.0 13 18603.5 14 27595.0 15 46748.0 16 65901.0 17 62933.0 18 59965.0 19 59965.0 20 63611.0 21 67257.0 22 52696.5 23 38136.0 24 40497.0 25 42858.0 26 42858.0 27 45021.5 28 47185.0 29 48395.5 30 49606.0 31 53213.0 32 56820.0 33 56820.0 34 61736.5 35 66653.0 36 72468.0 37 78283.0 38 81382.5 39 84482.0 40 84482.0 41 87311.0 42 90140.0 43 93580.0 44 97020.0 45 108300.0 46 119580.0 47 119580.0 48 175771.5 49 231963.0 50 210050.5 51 188138.0 52 165168.5 53 142199.0 54 142199.0 55 119150.5 56 96102.0 57 76907.5 58 57713.0 59 50271.5 60 42830.0 61 42830.0 62 37717.5 63 32605.0 64 28175.0 65 23745.0 66 20282.0 67 16819.0 68 16819.0 69 14181.0 70 11543.0 71 9736.0 72 7929.0 73 6493.5 74 5058.0 75 5058.0 76 3939.0 77 2820.0 78 2165.0 79 1510.0 80 1137.0 81 764.0 82 764.0 83 584.0 84 404.0 85 299.0 86 194.0 87 151.0 88 108.0 89 108.0 90 76.5 91 45.0 92 25.5 93 6.0 94 5.5 95 5.0 96 5.0 97 3.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1872482.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.34064692112265 #Duplication Level Percentage of deduplicated Percentage of total 1 77.05176777642126 32.62421694069788 2 12.411773848517308 10.510450683697899 3 4.198957828658941 5.3335977257979605 4 1.9061789881375517 3.228354060207797 5 1.0110374528389985 2.1403989907343615 6 0.6383698677524944 1.6217395905355272 7 0.43466469924198037 1.288278919177646 8 0.31369503989811165 1.0625640740186741 9 0.24799125381394574 0.945009910553651 >10 1.5278537403154233 12.513865526785557 >50 0.15298626788236813 4.45159394630928 >100 0.08874875542298215 7.0579961710554775 >500 0.0062122982050561585 1.7481476975681784 >1k 0.008494366933444134 7.285147596504568 >5k 7.606895761293255E-4 2.7598574456510705 >10k+ 5.071263840862169E-4 5.42878072070457 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 32683 1.7454373393175473 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 31592 1.6871724267576402 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25656 1.3701600335810973 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11201 0.598189995951897 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9534 0.5091637730028914 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8938 0.47733436155861575 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 8640 0.461419655836478 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 8612 0.45992431435923015 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8256 0.440912115577079 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 7433 0.3969597571565441 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 4643 0.2479596599593481 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4414 0.23572990287757103 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 4260 0.22750552475270788 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4135 0.22082989315785145 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3954 0.21116357860849932 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3845 0.20534242785778448 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3767 0.20117683374259407 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3345 0.17863990147835865 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3091 0.16507501807761035 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2988 0.15957429764344866 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 2954 0.1577585258496477 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2851 0.15225780541548598 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2797 0.14937393256650797 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 2768 0.14782518603650127 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2750 0.14686389508684194 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 2412 0.12881298725435011 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 2399 0.12811872156848506 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2337 0.12480760829743623 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 2171 0.11594236953946686 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2167 0.11572874932843145 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2134 0.11396638258738935 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 2119 0.11316530679600657 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 2105 0.11241763605738266 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 2059 0.10996100363047548 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 2017 0.10771799141460373 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1986 0.10606243477907931 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 1923 0.10269791645527167 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 1923 0.10269791645527167 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 1899 0.10141619518905924 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 5.3405052758851623E-5 0.0 0.0 0.0 0.0 2 5.3405052758851623E-5 0.0 0.0 0.0 0.0 3 5.3405052758851623E-5 0.0 0.0 0.0 0.0 4 5.3405052758851623E-5 0.0 0.0 0.0 0.0 5 5.3405052758851623E-5 0.0 0.0 0.0 0.0 6 1.0681010551770325E-4 0.0 0.0 0.0 0.0 7 1.0681010551770325E-4 0.0 0.0 0.0 0.0 8 2.136202110354065E-4 0.0 0.0 0.0 0.0 9 2.136202110354065E-4 0.0 0.0 5.3405052758851623E-5 0.0 10 2.136202110354065E-4 0.0 0.0 1.0681010551770325E-4 0.0 11 2.136202110354065E-4 0.0 0.0 1.6021515827655485E-4 0.0 12 2.136202110354065E-4 0.0 0.0 3.738353693119613E-4 0.0 13 2.136202110354065E-4 0.0 0.0 4.806454748296646E-4 0.0 14 2.136202110354065E-4 0.0 0.0 4.806454748296646E-4 0.0 15 2.136202110354065E-4 0.0 0.0 8.010757913827744E-4 0.0 16 2.136202110354065E-4 0.0 0.0 0.0013351263189712904 0.0 17 2.136202110354065E-4 0.0 0.0 0.0017623667410421036 0.0 18 2.136202110354065E-4 0.0 0.0 0.0020293920048363614 0.0 19 2.136202110354065E-4 0.0 0.0 0.003364518323807652 0.0 20 2.136202110354065E-4 0.0 0.0 0.005554125486920568 0.0 21 2.136202110354065E-4 0.0 0.0 0.01057420044625262 0.0 22 2.136202110354065E-4 0.0 0.0 0.018478148254562662 0.0 23 2.136202110354065E-4 0.0 0.0 0.023925463635965524 0.0 24 2.136202110354065E-4 0.0 0.0 0.031135145758410494 0.0 25 2.136202110354065E-4 0.0 5.3405052758851623E-5 0.03551436008463633 0.0 26 2.136202110354065E-4 0.0 5.3405052758851623E-5 0.044646624106399954 0.0 27 2.136202110354065E-4 0.0 5.3405052758851623E-5 0.10579540951528506 0.0 28 2.136202110354065E-4 0.0 5.3405052758851623E-5 0.1826986854880314 0.0 29 2.136202110354065E-4 0.0 5.3405052758851623E-5 0.27380770549463224 0.0 30 2.136202110354065E-4 0.0 5.3405052758851623E-5 0.4367465214618885 0.0 31 2.136202110354065E-4 0.0 5.3405052758851623E-5 0.6209939534799267 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7885 0.0 30.289791 1 ACGTTTA 140 0.0 22.464285 26 GTATTGG 630 0.0 22.31746 1 TACGGAT 60 3.7278987E-5 21.583334 7 CGAATTA 85 1.2461642E-6 19.588236 15 TCACGTT 165 0.0 19.060606 24 ATTGGAC 735 0.0 18.62585 3 GTTATAC 70 1.2197173E-4 18.5 3 GTATCAA 13205 0.0 18.128738 2 CGTTTAT 185 0.0 18.0 27 GATACCT 725 0.0 17.86207 36 GGACCCT 1245 0.0 17.831326 6 TTGGACC 1265 0.0 17.695652 4 TGGACCC 1320 0.0 17.51894 5 GGTATCG 65 0.0015804359 17.076923 35 TAACACT 200 0.0 16.650002 4 TAAGCCG 205 0.0 16.243902 36 CGGTTTA 80 3.3839874E-4 16.1875 15 TAGTGCC 70 0.0025933105 15.857142 7 GACCCTC 1400 0.0 15.592857 7 >>END_MODULE