##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088290_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1911866 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.866301822408055 31.0 31.0 33.0 28.0 34.0 2 31.117811080902115 31.0 31.0 34.0 28.0 34.0 3 31.14392797403165 31.0 31.0 34.0 28.0 34.0 4 35.027735730432994 35.0 35.0 37.0 32.0 37.0 5 34.81986708273488 35.0 35.0 37.0 32.0 37.0 6 34.91117421409241 35.0 35.0 37.0 32.0 37.0 7 34.688070712068736 35.0 35.0 37.0 31.0 37.0 8 34.79458654529135 35.0 35.0 37.0 32.0 37.0 9 36.19917190849149 38.0 35.0 39.0 32.0 39.0 10 36.035820502064475 38.0 35.0 39.0 30.0 39.0 11 36.133737929331865 38.0 35.0 39.0 31.0 39.0 12 35.892762881917456 37.0 35.0 39.0 30.0 39.0 13 35.97958591240181 37.0 35.0 39.0 30.0 39.0 14 36.723875522656925 38.0 36.0 40.0 31.0 41.0 15 36.822675856989974 38.0 36.0 40.0 31.0 41.0 16 36.76618497321465 38.0 36.0 40.0 31.0 41.0 17 36.935489725744375 38.0 36.0 40.0 31.0 41.0 18 36.962474357512505 38.0 36.0 40.0 31.0 41.0 19 37.08359320161559 39.0 36.0 40.0 31.0 41.0 20 37.06976744186046 39.0 36.0 40.0 31.0 41.0 21 37.002620999588885 39.0 36.0 40.0 31.0 41.0 22 36.92314262610455 39.0 36.0 40.0 31.0 41.0 23 36.79381557075653 39.0 35.0 40.0 30.0 41.0 24 36.70526020129026 38.0 35.0 40.0 30.0 41.0 25 36.56184638463156 38.0 35.0 40.0 30.0 41.0 26 36.28822155946076 38.0 35.0 40.0 30.0 41.0 27 36.13859234904538 38.0 35.0 40.0 30.0 41.0 28 35.94472729783364 38.0 34.0 40.0 29.0 41.0 29 35.72193344094199 38.0 34.0 40.0 29.0 41.0 30 35.442429019607026 38.0 34.0 40.0 27.0 41.0 31 35.10472962017212 37.0 34.0 40.0 27.0 41.0 32 34.96916467995142 37.0 33.0 40.0 27.0 41.0 33 34.7379790215423 37.0 33.0 40.0 26.0 41.0 34 34.80777261586324 37.0 33.0 40.0 25.0 41.0 35 34.62969266674547 37.0 33.0 40.0 25.0 41.0 36 34.494116742491364 37.0 33.0 40.0 24.0 41.0 37 34.32515720243992 37.0 33.0 40.0 24.0 41.0 38 34.18507416314742 37.0 33.0 40.0 23.0 41.0 39 34.001528349790206 37.0 33.0 40.0 21.0 41.0 40 33.719559843629206 37.0 33.0 40.0 20.0 41.0 41 33.5208215429324 37.0 33.0 40.0 18.0 41.0 42 33.271372575274626 37.0 32.0 40.0 17.0 41.0 43 32.86894740530979 37.0 31.0 40.0 15.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 4.0 15 13.0 16 46.0 17 90.0 18 224.0 19 529.0 20 1089.0 21 2100.0 22 3806.0 23 6605.0 24 10343.0 25 16234.0 26 23946.0 27 34542.0 28 45979.0 29 60231.0 30 75119.0 31 88573.0 32 104852.0 33 123813.0 34 144977.0 35 169891.0 36 206659.0 37 262879.0 38 289757.0 39 239565.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.13949408588259 22.544937772835542 15.465205197435386 20.85036294384648 2 18.787299946753592 24.65669665133435 35.86893642127639 20.68706698063567 3 20.35676140482649 25.362865389101536 34.55351996426528 19.726853241806698 4 12.848337697307239 16.46632138444849 36.10373321142799 34.58160770681628 5 10.934448334768232 39.82564677650003 35.10350620807107 14.136398680660674 6 30.777680025692177 37.04171735885255 12.4380578973631 19.742544718092166 7 23.215696079118516 36.007282937193295 21.17381657501101 19.60320440867718 8 26.949273641562744 34.03292908603427 18.832386788613846 20.185410483789134 9 23.24938044821133 14.323336468141596 24.143428462036564 38.28385462161051 10 15.93061438406248 27.858908521831548 33.75388233275763 22.456594761348335 11 30.695665909640113 22.08920499658449 25.862272774347154 21.352856319428245 12 21.50998030196677 27.81695997522839 32.10047147655746 18.572588246247385 13 32.903822757452666 20.954815870986774 28.909139029618185 17.232222341942375 14 19.511566187170022 24.035000360903954 30.430166130889923 26.023267321036098 15 20.683144111564307 29.369213114308216 29.549978921116853 20.39766385301062 16 19.35423298494769 29.35885673995981 29.847280091805594 21.439630183286905 17 20.196394517188967 26.141319527623796 28.530137572403085 25.13214838278415 18 22.750077672807613 23.61483493089997 33.46678062165444 20.16830677463797 19 21.63362913509629 22.851863048979375 35.56389412228682 19.950613693637525 20 23.11840892614859 21.43152292053941 36.11199738893834 19.338070764373654 21 21.240505349224264 23.081690871640586 37.448701948776744 18.229101830358406 22 18.400452751395758 23.31031568111991 36.7274693937755 21.561762173708825 23 20.604372900611235 23.818562598006345 38.38286783697184 17.19419666441058 24 20.403731223841 23.458077082808103 34.47725938951788 21.660932303833007 25 20.093249213072465 24.912467714787542 35.59187725499591 19.40240581714409 26 19.642851538758467 25.85233483936636 35.42063094380046 19.08418267807472 27 17.533550991544384 26.24252954966509 35.08729168257608 21.136627776214443 28 18.745612924755186 25.002902923112813 35.03775892243494 21.21372522969706 29 18.96780422895747 24.77281357584684 33.64775564814689 22.6116265470488 30 19.66717332700095 25.056515467088175 36.71287632083002 18.56343488508086 31 21.509091118310593 24.83945004513915 35.53789857657388 18.11356025997638 32 20.810558899002334 24.88913972004314 33.899237708082055 20.40106367287247 33 19.752901092440577 24.93799251621191 35.057896317001294 20.251210074346215 34 18.0759530218122 26.21098968233129 36.244851888155345 19.468205407701166 35 17.38432505206955 29.659610035431356 33.82187872999467 19.134186182504422 36 21.615479327526092 25.879690313024028 33.1610583586925 19.343772000757376 37 20.498507740605252 27.61647521322101 32.685606627242706 19.199410418931034 38 20.213602836182034 24.901902120755327 34.42448372427775 20.460011318784893 39 19.30674011672366 24.67055745538652 35.344736503499725 20.677965924390097 40 17.27757070840739 25.71440676281706 34.34294035251425 22.665082176261304 41 20.51566375467737 24.617258740936865 34.110026539516895 20.757050964868874 42 18.427651310290575 28.16954744736294 32.79382550869151 20.608975733654976 43 19.405596417322137 28.57349835187194 30.703773172387606 21.31713205841832 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 103.0 1 164.5 2 226.0 3 749.0 4 1272.0 5 1272.0 6 2546.5 7 3821.0 8 4410.0 9 4999.0 10 7888.5 11 10778.0 12 10778.0 13 21249.0 14 31720.0 15 54130.5 16 76541.0 17 73760.0 18 70979.0 19 70979.0 20 73123.0 21 75267.0 22 57809.0 23 40351.0 24 41824.5 25 43298.0 26 43298.0 27 44908.5 28 46519.0 29 46545.0 30 46571.0 31 49728.0 32 52885.0 33 52885.0 34 57362.5 35 61840.0 36 67344.0 37 72848.0 38 76030.0 39 79212.0 40 79212.0 41 81643.0 42 84074.0 43 88482.0 44 92890.0 45 108798.0 46 124706.0 47 124706.0 48 197211.5 49 269717.0 50 238873.0 51 208029.0 52 177098.5 53 146168.0 54 146168.0 55 119892.0 56 93616.0 57 72933.0 58 52250.0 59 44755.5 60 37261.0 61 37261.0 62 32286.5 63 27312.0 64 23335.5 65 19359.0 66 16468.5 67 13578.0 68 13578.0 69 11261.5 70 8945.0 71 7561.0 72 6177.0 73 4996.0 74 3815.0 75 3815.0 76 3041.0 77 2267.0 78 1721.5 79 1176.0 80 920.5 81 665.0 82 665.0 83 492.5 84 320.0 85 243.0 86 166.0 87 123.5 88 81.0 89 81.0 90 65.5 91 50.0 92 30.5 93 11.0 94 7.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1911866.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.19019403747282 #Duplication Level Percentage of deduplicated Percentage of total 1 75.75893193209994 28.93248310558592 2 12.724803511085547 9.71925430354145 3 4.489868199041544 5.144068131722256 4 2.084052074994662 3.18361412512976 5 1.11598640119725 2.1309868602451982 6 0.6967100999770381 1.5964496343594106 7 0.4821117395208121 1.2888358616030358 8 0.3549421807202462 1.0844248603031958 9 0.26830401736119214 0.9221924235651661 >10 1.7320451758178523 12.58220926891288 >50 0.17036361453655727 4.481041678369111 >100 0.09979629681288625 7.102061599942076 >500 0.01035222976616096 2.7058004729268537 >1k 0.009662081115083564 7.690683031320149 >5k 8.281783812928769E-4 1.857160655789713 >10k+ 0.0012422675719393154 9.578733986683897 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 38789 2.0288555787905636 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37158 1.9435462527185483 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 34177 1.7876252833619093 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12934 0.6765118475876447 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12768 0.6678292307096836 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 12313 0.644030491676718 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 12064 0.6310065663597763 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 11240 0.5879073114956801 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10269 0.5371192332517029 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7853 0.41075054423270246 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 6037 0.315764807784646 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 5755 0.3010148200763024 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5321 0.27831448438331974 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5169 0.2703641363986807 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5096 0.26654587716921585 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4715 0.24661770228666655 No Hit GTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAGCG 4572 0.23913809859059162 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4128 0.2159147136880932 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4081 0.21345638240336928 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4040 0.2113118806443548 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3838 0.20074628661213706 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 3299 0.1725539342192392 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCTG 3105 0.16240677955463406 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 3056 0.15984383842800698 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2948 0.1541949069652371 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2909 0.15215501504812576 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2875 0.15037664773577228 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 2863 0.1497489886843534 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 2824 0.14770909676724206 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 2810 0.14697682787392002 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2723 0.1424262997511332 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2723 0.1424262997511332 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 2705 0.14148481117400485 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACTGT 2645 0.1383465159169105 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2635 0.13782346670739476 No Hit AGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGATACCCT 2497 0.13060538761607768 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 2389 0.12495645615330782 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2329 0.12181816089621345 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGAT 2293 0.11993518374195682 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 2245 0.11742454753628132 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 2213 0.11575079006583097 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAAAAAAA 2082 0.10889884542117491 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2064 0.1079573568440466 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2062 0.10785274700214345 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAAAAAAA 2036 0.10649281905740257 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 2028 0.10607437968978997 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 1970 0.10304069427459873 No Hit TTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCC 1961 0.1025699499860346 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.2304920951572963E-5 0.0 3 0.0 0.0 0.0 5.2304920951572963E-5 0.0 4 0.0 0.0 0.0 1.0460984190314593E-4 0.0 5 0.0 0.0 0.0 1.569147628547189E-4 0.0 6 2.0921968380629185E-4 0.0 0.0 1.569147628547189E-4 0.0 7 2.0921968380629185E-4 0.0 0.0 1.569147628547189E-4 0.0 8 2.0921968380629185E-4 0.0 0.0 2.0921968380629185E-4 0.0 9 2.0921968380629185E-4 0.0 0.0 2.6152460475786484E-4 0.0 10 2.0921968380629185E-4 0.0 0.0 5.753541304673026E-4 0.0 11 2.0921968380629185E-4 0.0 0.0 9.937934980798863E-4 0.0 12 2.0921968380629185E-4 0.0 0.0 0.0017260623914019078 0.0 13 2.0921968380629185E-4 0.0 0.0 0.0018306722333050539 0.0 14 2.0921968380629185E-4 0.0 0.0 0.0020398919171113455 0.0 15 2.6152460475786484E-4 0.0 0.0 0.0027198558894817944 0.0 16 2.6152460475786484E-4 0.0 0.0 0.0036613444666101077 0.0 17 2.6152460475786484E-4 0.0 0.0 0.005387406858012016 0.0 18 2.6152460475786484E-4 0.0 0.0 0.006904249565607631 0.0 19 2.6152460475786484E-4 0.0 0.0 0.008734921798912686 0.0 20 2.6152460475786484E-4 0.0 0.0 0.014226938498827847 0.0 21 2.6152460475786484E-4 0.0 0.0 0.0282446573138494 0.0 22 2.6152460475786484E-4 0.0 0.0 0.04592372059548106 0.0 23 2.6152460475786484E-4 0.0 0.0 0.05659392446960195 0.0 24 2.6152460475786484E-4 0.0 0.0 0.07176235154555811 0.0 25 3.138295257094378E-4 0.0 0.0 0.07929426016258462 0.0 26 3.138295257094378E-4 0.0 0.0 0.0907490378509791 5.2304920951572963E-5 27 3.138295257094378E-4 0.0 0.0 0.16449897639269698 5.2304920951572963E-5 28 3.138295257094378E-4 0.0 0.0 0.26654587716921585 5.2304920951572963E-5 29 3.138295257094378E-4 0.0 0.0 0.3802044703969839 5.2304920951572963E-5 30 3.138295257094378E-4 0.0 0.0 0.5967991480574475 5.2304920951572963E-5 31 3.138295257094378E-4 0.0 0.0 0.846973584968821 5.2304920951572963E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8595 0.0 31.468294 1 GTATTGG 540 0.0 25.694445 1 ATTGGAC 575 0.0 25.417393 3 TTAGACG 75 9.271043E-6 19.733334 4 TTGGACC 1110 0.0 19.166666 4 TATTGGA 725 0.0 19.137932 2 AGACGTA 50 0.007036548 18.5 5 CCGTACG 50 0.007036548 18.5 2 GGACCCT 1125 0.0 17.595556 6 TGGACCC 1160 0.0 17.543104 5 GTATCAA 15745 0.0 17.2369 2 GATACTG 850 0.0 16.32353 36 GTAAGAC 115 1.2431738E-6 16.086956 3 TGATACT 870 0.0 15.9482765 35 GTCTACG 70 0.0025933364 15.857143 1 GACCCTC 1220 0.0 15.618853 7 TTTTTAC 1935 0.0 15.488372 1 CTTAGAC 120 1.9370382E-6 15.416666 3 TACGTGA 145 5.351103E-8 15.310345 36 ATAACGC 85 5.366462E-4 15.235294 3 >>END_MODULE