##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088289_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 732615 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.154423537601605 31.0 30.0 31.0 27.0 34.0 2 30.370651706558014 31.0 30.0 31.0 27.0 34.0 3 30.248482490803493 31.0 30.0 31.0 26.0 34.0 4 34.108433488257816 35.0 33.0 37.0 30.0 37.0 5 33.75715348443589 35.0 33.0 37.0 28.0 37.0 6 34.06764944752701 35.0 33.0 37.0 30.0 37.0 7 33.8647188496004 35.0 33.0 37.0 29.0 37.0 8 34.05594753042185 35.0 33.0 37.0 30.0 37.0 9 35.349165659998775 37.0 34.0 39.0 30.0 39.0 10 35.04536762146557 37.0 34.0 39.0 29.0 39.0 11 35.295518109784815 37.0 34.0 39.0 30.0 39.0 12 34.96805689209203 37.0 34.0 39.0 27.0 39.0 13 35.14432000436791 37.0 34.0 39.0 29.0 39.0 14 35.74018140496714 38.0 34.0 40.0 27.0 41.0 15 35.888321969929635 38.0 34.0 40.0 29.0 41.0 16 35.7080417408871 38.0 34.0 40.0 27.0 41.0 17 35.9002545675423 38.0 34.0 40.0 29.0 41.0 18 35.95677402182592 38.0 34.0 40.0 29.0 41.0 19 36.0783740436655 38.0 34.0 40.0 29.0 41.0 20 36.040861844215584 38.0 34.0 40.0 29.0 41.0 21 35.96014414119285 38.0 34.0 40.0 29.0 41.0 22 35.85611951707241 38.0 34.0 40.0 28.0 41.0 23 35.68097158807832 38.0 34.0 40.0 27.0 41.0 24 35.59916327129529 38.0 34.0 40.0 27.0 41.0 25 35.452080560731076 38.0 34.0 40.0 27.0 41.0 26 35.083753403902456 37.0 33.0 40.0 27.0 41.0 27 34.85879349999659 37.0 33.0 40.0 26.0 41.0 28 34.64594500522102 37.0 33.0 40.0 25.0 41.0 29 34.43483275663206 37.0 33.0 39.0 25.0 40.0 30 34.16256560403486 36.0 32.0 39.0 25.0 40.0 31 33.82302027668011 36.0 32.0 39.0 24.0 40.0 32 33.64093418780669 36.0 32.0 39.0 24.0 40.0 33 33.40849422957488 35.0 31.0 39.0 23.0 40.0 34 33.465868157217635 35.0 31.0 39.0 23.0 40.0 35 33.31283143260785 35.0 31.0 39.0 22.0 40.0 36 33.17627266708981 35.0 31.0 39.0 21.0 40.0 37 33.007104686636225 35.0 31.0 39.0 21.0 40.0 38 32.861594425448565 35.0 31.0 39.0 19.0 40.0 39 32.61664994574231 35.0 31.0 39.0 18.0 40.0 40 32.35473065662046 35.0 30.0 39.0 15.0 40.0 41 32.136740306982524 35.0 30.0 39.0 15.0 40.0 42 31.898118384144468 35.0 30.0 39.0 13.0 40.0 43 31.448992990861502 35.0 29.0 39.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 1.0 13 3.0 14 7.0 15 12.0 16 41.0 17 105.0 18 250.0 19 568.0 20 1034.0 21 1820.0 22 3000.0 23 4762.0 24 7057.0 25 10204.0 26 14085.0 27 18686.0 28 24392.0 29 30639.0 30 36763.0 31 42696.0 32 48938.0 33 56659.0 34 64862.0 35 74658.0 36 87591.0 37 95439.0 38 78416.0 39 29926.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.69369996519318 26.132416071197014 15.342437706025674 18.831446257584133 2 23.890310736198412 26.70898084259809 29.935095514014865 19.465612907188632 3 25.42959125871024 25.439009575288523 31.650321109996383 17.481078056004858 4 19.521303822608054 19.43926892023778 31.836503484094646 29.20292377305952 5 11.108699658074158 42.58512315472656 33.53234645755274 12.77383072964654 6 31.368727094039844 37.858493205844816 12.77574169243054 17.9970380076848 7 22.626208854582558 36.41148488633184 22.226544638043176 18.73576162104243 8 27.092674870156902 36.42595360455355 18.8751254069327 17.606246118356843 9 23.846631586849846 14.069463497198392 23.634924209851015 38.44898070610075 10 16.97439992356149 29.8531971089863 32.82815667164882 20.34424629580339 11 32.030193211987196 22.57829828764085 23.85659589279499 21.534912607576967 12 18.914300144004695 29.588528763402334 32.87279130238939 18.624379790203584 13 32.195764487486606 21.26137193478157 28.832742982330416 17.710120595401406 14 18.94064413095555 24.146516246596097 31.20274632651529 25.710093295933063 15 21.894856097677497 30.159633641134835 28.809538434238995 19.13597182694867 16 19.35136463217379 28.701432539601292 31.050551790503878 20.89665103772104 17 19.540413450448053 27.819796209468823 30.793117804030768 21.84667253605236 18 20.695317458692493 24.789691720753737 33.6085119742293 20.906478846324468 19 20.811203701807905 24.106795520157245 36.25587791677757 18.82612286125728 20 21.181247995195292 23.78534428042014 36.569958300062105 18.463449424322462 21 20.329641080239963 24.372965336500073 37.23824928509517 18.059144298164792 22 18.441882844331605 24.66315868498461 36.79640738996608 20.0985510807177 23 19.715403042525747 24.892747213748013 37.994717552875656 17.397132190850584 24 19.49850876654177 25.007814472813145 35.55564655378337 19.938030206861722 25 19.501238713376058 25.828845983224475 35.98615916955018 18.683756133849293 26 19.182653917814953 26.554192857094105 35.65747357070221 18.605679654388734 27 18.527466677586453 26.27805873480614 35.47838905837309 19.716085529234316 28 18.641578455259584 26.627901421619814 35.860854609856474 18.86966551326413 29 19.028684916361254 25.14390232250227 34.968707984412006 20.858704776724473 30 19.33198200965036 26.032636514403883 36.40356804051241 18.231813435433345 31 19.984166308361146 25.92234666229875 35.72299229472506 18.370494734615043 32 19.787200644267454 25.744217631361625 35.18041536141084 19.288166362960084 33 19.228926516656088 26.163400967766155 35.31472874565768 19.292943769920083 34 18.517229376957882 26.37565433413184 36.10846078772616 18.998655501184114 35 17.992124103383087 28.05620960531794 34.96502255618572 18.986643735113258 36 20.789364127133624 25.762781269834772 33.985517632044115 19.46233697098749 37 19.759491683899455 27.044354811190054 33.703787118745865 19.49236638616463 38 19.950724459641147 25.19440633893655 34.80627614777202 20.04859305365028 39 18.867891047821843 25.379360236959386 35.4000395842291 20.352709130989673 40 18.02870539096251 25.732069367949062 34.23721873016523 22.0020065109232 41 19.645516403568042 24.887696812104583 34.37876647352292 21.08802031080445 42 18.959071272086973 26.953584078950062 32.83334357063396 21.254001078328997 43 19.51570743159777 26.918231267446068 31.679258546439808 21.886802754516353 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 105.0 2 124.0 3 266.0 4 408.0 5 408.0 6 865.5 7 1323.0 8 1542.0 9 1761.0 10 2868.5 11 3976.0 12 3976.0 13 8612.5 14 13249.0 15 21943.5 16 30638.0 17 27782.0 18 24926.0 19 24926.0 20 28776.5 21 32627.0 22 25347.5 23 18068.0 24 18273.5 25 18479.0 26 18479.0 27 19229.5 28 19980.0 29 20865.5 30 21751.0 31 22877.5 32 24004.0 33 24004.0 34 26297.5 35 28591.0 36 30491.0 37 32391.0 38 34054.0 39 35717.0 40 35717.0 41 37123.5 42 38530.0 43 39800.5 44 41071.0 45 44288.5 46 47506.0 47 47506.0 48 63451.0 49 79396.0 50 71142.5 51 62889.0 52 54150.5 53 45412.0 54 45412.0 55 38705.5 56 31999.0 57 27045.0 58 22091.0 59 19407.0 60 16723.0 61 16723.0 62 14690.5 63 12658.0 64 10874.0 65 9090.0 66 7619.0 67 6148.0 68 6148.0 69 5197.5 70 4247.0 71 3486.5 72 2726.0 73 2258.0 74 1790.0 75 1790.0 76 1406.5 77 1023.0 78 812.0 79 601.0 80 451.0 81 301.0 82 301.0 83 234.0 84 167.0 85 120.5 86 74.0 87 59.5 88 45.0 89 45.0 90 34.0 91 23.0 92 13.0 93 3.0 94 2.0 95 1.0 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 732615.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 55.44124011935159 #Duplication Level Percentage of deduplicated Percentage of total 1 85.42838832396585 47.36255790078202 2 8.44119684060779 9.359808418696968 3 2.352916782340051 3.913458729317007 4 1.0098200367016652 2.2394270052843788 5 0.5741116433141488 1.5914730736147626 6 0.37265747909335023 1.2396355668412007 7 0.27183832125988294 1.0549737549827425 8 0.21383419634626494 0.9484186420289479 9 0.15861327970209155 0.7914345233473379 >10 1.0313248873388758 10.841141125127013 >50 0.08653977279297394 3.2793172923544405 >100 0.04720343018888101 4.966061808484241 >500 0.006883833569163677 2.6675851032955813 >1k 0.0036877679834805416 3.612164571173481 >5k 4.917023977974055E-4 1.9874333652420861 >10k+ 4.917023977974055E-4 4.145109119427823 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16199 2.2111204384294614 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14212 1.9399002204432068 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9113 1.2439002750421435 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5468 0.746367464493629 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTA 3586 0.4894794673873726 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGG 3040 0.41495191881138116 No Hit GAGTACGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2617 0.3572135432662449 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAG 2125 0.29005685114282403 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1919 0.2619383987496844 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1692 0.23095350218054503 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1587 0.21662128130054667 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1579 0.2155293025668325 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCGTAC 1346 0.18372542194740757 No Hit TATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTGT 1310 0.17881151764569386 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1249 0.17048517980112338 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1147 0.15656245094626783 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1147 0.15656245094626783 No Hit GGTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCT 1079 0.14728063170969743 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1078 0.14714413436798318 No Hit CTTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGC 970 0.132402421462842 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 969 0.13226592412112775 No Hit GTATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTCTG 918 0.12530455969369997 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCGTACTCTGCGTTGA 862 0.11766070855770085 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 861 0.11752421121598658 No Hit ATCAACGCAGAGTACGGGCTTGCTACACGATTCAGACTTAGGA 856 0.11684172450741521 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 837 0.11424827501484408 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC 829 0.11315629628112993 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 784 0.10701391590398777 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 763 0.1041474717279881 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 742 0.10128102755198844 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 1.3649734171427013E-4 0.0 0.0 0.0 0.0 7 1.3649734171427013E-4 0.0 0.0 0.0 0.0 8 4.094920251428103E-4 0.0 0.0 0.0 0.0 9 4.094920251428103E-4 0.0 0.0 2.7299468342854025E-4 1.3649734171427013E-4 10 4.094920251428103E-4 0.0 0.0 2.7299468342854025E-4 1.3649734171427013E-4 11 4.094920251428103E-4 0.0 0.0 2.7299468342854025E-4 1.3649734171427013E-4 12 4.094920251428103E-4 0.0 0.0 4.094920251428103E-4 1.3649734171427013E-4 13 5.459893668570805E-4 0.0 0.0 6.824867085713506E-4 1.3649734171427013E-4 14 5.459893668570805E-4 0.0 0.0 6.824867085713506E-4 2.7299468342854025E-4 15 5.459893668570805E-4 0.0 0.0 9.554813919998908E-4 2.7299468342854025E-4 16 5.459893668570805E-4 0.0 0.0 0.0015014707588569712 2.7299468342854025E-4 17 5.459893668570805E-4 0.0 0.0 0.0020474601257140517 2.7299468342854025E-4 18 5.459893668570805E-4 0.0 0.0 0.002320454809142592 2.7299468342854025E-4 19 5.459893668570805E-4 0.0 0.0 0.0028664441759996724 2.7299468342854025E-4 20 5.459893668570805E-4 0.0 0.0 0.005596391010285075 2.7299468342854025E-4 21 5.459893668570805E-4 0.0 0.0 0.01078328999542734 2.7299468342854025E-4 22 5.459893668570805E-4 0.0 0.0 0.02033810391542625 2.7299468342854025E-4 23 5.459893668570805E-4 0.0 0.0 0.02497901353371143 2.7299468342854025E-4 24 5.459893668570805E-4 0.0 0.0 0.030848399227425046 2.7299468342854025E-4 25 5.459893668570805E-4 0.0 0.0 0.03603529821256731 2.7299468342854025E-4 26 5.459893668570805E-4 0.0 0.0 0.043269657323423624 2.7299468342854025E-4 27 5.459893668570805E-4 0.0 0.0 0.10933437071313036 2.7299468342854025E-4 28 5.459893668570805E-4 0.0 0.0 0.18099547511312217 2.7299468342854025E-4 29 5.459893668570805E-4 0.0 0.0 0.2579799758399705 2.7299468342854025E-4 30 6.824867085713506E-4 0.0 0.0 0.40266715805709685 2.7299468342854025E-4 31 8.189840502856206E-4 0.0 0.0 0.5828436491199334 2.7299468342854025E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3375 0.0 30.477036 1 GATAATC 25 0.0054950584 29.6 7 CCGTGGA 65 2.680641E-6 22.76923 2 ACGTTTA 80 6.9530324E-7 20.8125 26 CGTGGAT 55 5.140648E-4 20.181818 3 TATACTG 75 9.25825E-6 19.733334 5 GTATCAA 5255 0.0 19.608944 2 TACCCCA 50 0.007032506 18.5 5 CGCGCCC 50 0.007032506 18.5 26 TAGTTCG 70 1.21843186E-4 18.5 9 AAAACGG 90 2.150049E-6 18.499998 26 TCACGTT 90 2.150049E-6 18.499998 24 GTATTGG 180 0.0 17.472221 1 TTAAGGT 65 0.0015791947 17.076923 4 GACCCTC 270 0.0 16.444445 7 GTGGTAT 495 0.0 16.444443 1 TCGAACC 90 4.4424185E-5 16.444443 31 GATTAGA 80 3.3804716E-4 16.1875 2 TATCCTG 115 1.2406144E-6 16.086956 5 GGACCCT 265 0.0 16.056604 6 >>END_MODULE