##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088288_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 524557 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.88707995508591 31.0 30.0 33.0 27.0 34.0 2 30.764290629998264 31.0 31.0 34.0 27.0 34.0 3 30.74868317456444 31.0 31.0 34.0 27.0 34.0 4 34.95117213191322 35.0 35.0 37.0 32.0 37.0 5 34.8646629441605 35.0 35.0 37.0 32.0 37.0 6 34.96996513248322 35.0 35.0 37.0 32.0 37.0 7 34.56739496375037 35.0 35.0 37.0 30.0 37.0 8 34.801541109927044 35.0 35.0 37.0 32.0 37.0 9 36.20260143320935 38.0 35.0 39.0 32.0 39.0 10 36.16564072159937 38.0 35.0 39.0 32.0 39.0 11 36.2606237263062 38.0 35.0 39.0 32.0 39.0 12 35.98814809448735 38.0 35.0 39.0 30.0 39.0 13 36.148344221886276 38.0 35.0 39.0 32.0 39.0 14 37.034817951147346 39.0 36.0 40.0 31.0 41.0 15 37.10021980452077 39.0 36.0 40.0 31.0 41.0 16 37.01060132645261 39.0 36.0 40.0 31.0 41.0 17 37.128544657682575 39.0 36.0 40.0 31.0 41.0 18 37.12511319074953 39.0 36.0 40.0 31.0 41.0 19 37.22286424544902 39.0 36.0 40.0 31.0 41.0 20 37.18727993335329 39.0 36.0 40.0 31.0 41.0 21 37.107830035630066 39.0 36.0 40.0 31.0 41.0 22 37.04972004948938 39.0 36.0 40.0 31.0 41.0 23 36.904199162340795 39.0 35.0 40.0 31.0 41.0 24 36.83344803329285 39.0 35.0 40.0 31.0 41.0 25 36.755391692418556 38.0 35.0 40.0 30.0 41.0 26 36.497526484252425 38.0 35.0 40.0 30.0 41.0 27 36.3416597243007 38.0 35.0 40.0 30.0 41.0 28 36.16837255055218 38.0 35.0 40.0 30.0 41.0 29 36.01385168818641 38.0 34.0 40.0 29.0 41.0 30 35.8406064545893 38.0 34.0 40.0 29.0 41.0 31 35.57251928770372 38.0 34.0 40.0 28.0 41.0 32 35.3009091481002 38.0 34.0 40.0 27.0 41.0 33 35.41103064109334 38.0 34.0 40.0 27.0 41.0 34 35.381573403843625 38.0 34.0 40.0 27.0 41.0 35 35.298402270868564 38.0 34.0 40.0 27.0 41.0 36 35.19741610539941 38.0 34.0 40.0 26.0 41.0 37 35.03653177824336 38.0 33.0 40.0 25.0 41.0 38 34.91019660399156 38.0 33.0 40.0 25.0 41.0 39 34.841715962230985 38.0 33.0 40.0 24.0 41.0 40 34.6913357366311 38.0 33.0 40.0 24.0 41.0 41 34.525471969681085 38.0 33.0 40.0 23.0 41.0 42 34.31799975979732 38.0 33.0 40.0 22.0 41.0 43 33.95775101657208 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 5.0 17 20.0 18 42.0 19 112.0 20 215.0 21 442.0 22 809.0 23 1351.0 24 2249.0 25 3587.0 26 5353.0 27 7893.0 28 10816.0 29 14597.0 30 18667.0 31 22624.0 32 27425.0 33 33586.0 34 39998.0 35 47578.0 36 57612.0 37 71810.0 38 81514.0 39 76251.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.62611689482745 25.696349491094388 14.000194449792872 21.677339164285293 2 17.68558993588876 23.656342399396063 35.9875094603637 22.670558204351483 3 19.671074830761956 26.704247584151965 32.523062317345875 21.101615267740208 4 13.121357640828357 16.43253259416994 35.7553135312273 34.6907962337744 5 10.754789279334753 40.91681170969027 35.012591577273774 13.315807433701199 6 30.917517066782064 36.73957262985719 15.671700120291979 16.67121018306876 7 23.448166738791016 35.903629157555805 22.114851198249188 18.533352905403987 8 27.215917431280108 34.08838314997226 20.638557868830272 18.057141549917358 9 24.87718207935458 14.037559311952752 24.48637612309053 36.59888248560213 10 16.08843271560574 28.641882579014293 34.090670794594296 21.17901391078567 11 30.628130022094837 22.562848270064073 25.35625299061875 21.45276871722234 12 19.41695564066441 28.38452255903553 32.08879111326319 20.109730687036873 13 30.2020562112411 21.92516733167225 29.27270058354002 18.600075873546633 14 20.227163110967922 23.742129072722314 29.167087656822805 26.863620159486956 15 22.608410525452907 29.848996391240608 27.26491115360199 20.277681929704492 16 20.963594042210858 29.16060599706038 27.93519102785779 21.940608932870976 17 18.69844459229407 28.20208290042836 28.752833343182914 24.346639164094654 18 19.713205619217742 27.35336674565395 33.02062502263815 19.912802612490157 19 18.981731251322547 26.222507754162084 34.560781764422174 20.234979230093202 20 23.202054304870586 24.94257058813437 33.215074815510995 18.640300291484053 21 22.367826566035724 25.961716267250267 31.98851602399739 19.681941142716617 22 21.00610610477031 25.65879399188267 32.50266415279941 20.832435750547603 23 19.881728773040873 27.52055544011423 33.53992035183974 19.057795435005158 24 18.69844459229407 26.912423244757004 32.28934129179479 22.099790871154134 25 19.767155904887364 27.71519587003891 33.265593634247566 19.252054590826166 26 21.148893256595567 26.674317567013688 31.855070087712107 20.321719088678638 27 19.983719595773195 27.91612732267418 31.473986621091704 20.626166460460922 28 19.633519331550243 27.481474844487824 31.724293070152527 21.160712753809406 29 18.72017721620339 27.279780843645206 32.695970123361235 21.304071816790167 30 18.192875130824675 27.52799028513584 34.68831795210053 19.59081663193895 31 19.63370996860208 27.04586918104229 33.388554532681866 19.931866317673773 32 20.44506126121661 27.47041789548133 31.58989394860806 20.494626894693997 33 21.43923348654198 27.30627939385043 31.02351126760295 20.230975852004644 34 19.66745272677707 29.639676908324546 31.060494855659154 19.632375509239225 35 18.446994320922226 30.399937471047 31.295359703521257 19.857708504509517 36 19.580712868191636 27.115451704962474 33.16913128601849 20.134704140827402 37 19.518946463396734 27.28511868109662 32.38199089898715 20.813943956519502 38 19.94216071847292 26.87181755271591 32.95599906206571 20.230022666745466 39 20.64008296524496 26.401706582888036 32.89194501264877 20.06626543921824 40 19.035109625836657 26.937968609703045 32.27752179458095 21.749399969879345 41 20.002973938008644 26.42858640719693 32.013108203684254 21.555331451110174 42 17.822086065003422 27.980753283246624 32.39533549261567 21.801825159134278 43 18.321173866710385 27.64751971663709 32.135497190963044 21.895809225689487 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 85.0 1 97.5 2 110.0 3 257.0 4 404.0 5 404.0 6 689.5 7 975.0 8 1130.5 9 1286.0 10 1874.0 11 2462.0 12 2462.0 13 4500.0 14 6538.0 15 10637.0 16 14736.0 17 14444.0 18 14152.0 19 14152.0 20 15237.0 21 16322.0 22 13825.0 23 11328.0 24 12276.0 25 13224.0 26 13224.0 27 14397.0 28 15570.0 29 16289.5 30 17009.0 31 18168.5 32 19328.0 33 19328.0 34 20790.0 35 22252.0 36 23761.0 37 25270.0 38 25983.5 39 26697.0 40 26697.0 41 27467.5 42 28238.0 43 31498.5 44 34759.0 45 42915.0 46 51071.0 47 51071.0 48 51323.0 49 51575.0 50 46535.5 51 41496.0 52 37546.0 53 33596.0 54 33596.0 55 28825.0 56 24054.0 57 19862.0 58 15670.0 59 13519.5 60 11369.0 61 11369.0 62 9833.5 63 8298.0 64 7057.5 65 5817.0 66 4860.0 67 3903.0 68 3903.0 69 3301.0 70 2699.0 71 2249.5 72 1800.0 73 1458.0 74 1116.0 75 1116.0 76 863.0 77 610.0 78 462.0 79 314.0 80 250.0 81 186.0 82 186.0 83 143.0 84 100.0 85 82.5 86 65.0 87 55.0 88 45.0 89 45.0 90 31.0 91 17.0 92 12.5 93 8.0 94 5.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 524557.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 56.80971261827575 #Duplication Level Percentage of deduplicated Percentage of total 1 83.4084402878331 47.384095226904115 2 9.958154315151045 11.31439769704347 3 2.743649692321075 4.67597851637943 4 1.1489473731442628 2.610854803273936 5 0.6293858439652524 1.787761446083847 6 0.3705014323388926 1.2628847937499217 7 0.29025671316844054 1.1542580322437084 8 0.2138111330424075 0.9717239218181677 9 0.158482886504868 0.8103030513530727 >10 0.9399686056262154 9.90057741951636 >50 0.07413163229292451 2.8925340883684494 >100 0.05474859059498699 6.3982320643683686 >500 0.0047607470082597384 1.835048501794539 >1k 0.0037405869350612226 3.4514134680557147 >5k 0.0010201600731985154 3.549936969046895 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6665 1.2705959504877449 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 6263 1.1939598556496245 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5448 1.0385906584031859 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2745 0.5232987072901515 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2370 0.4518098128516062 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 1822 0.34734070844541204 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1617 0.3082601128190073 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1549 0.2952967932941511 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1444 0.27527990285135834 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1427 0.27203907297014435 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1375 0.262125946274666 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1220 0.23257720324006737 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1178 0.22457044706295026 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1119 0.21332286100461917 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 981 0.1870149478512345 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 926 0.1765299100002478 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 883 0.16833251677129465 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 769 0.14659989286197686 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 738 0.1406901442550571 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 736 0.14030887015138488 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 620 0.11819497213839487 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 608 0.11590732751636142 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 575 0.10961630480576944 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 567 0.10809120839108048 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 546 0.10408783030252193 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 1.9063705183612077E-4 0.0 12 0.0 0.0 0.0 1.9063705183612077E-4 0.0 13 0.0 0.0 0.0 5.719111555083623E-4 0.0 14 0.0 0.0 0.0 0.0011438223110167246 0.0 15 0.0 0.0 0.0 0.0019063705183612076 0.0 16 0.0 0.0 0.0 0.0026689187257056906 0.0 17 0.0 0.0 0.0 0.00495656334773914 0.0 18 0.0 0.0 0.0 0.005528474503247502 0.0 19 0.0 0.0 0.0 0.006291022710591985 0.0 20 0.0 0.0 0.0 0.008006756177117071 0.0 21 0.0 0.0 0.0 0.011056949006495004 0.0 22 0.0 0.0 0.0 0.01696669761341475 0.0 23 0.0 0.0 0.0 0.03012065419010708 0.0 24 0.0 0.0 0.0 0.045562255388832865 0.0 25 0.0 0.0 0.0 0.05280646335860545 0.0 26 0.0 0.0 0.0 0.06443532352060882 0.0 27 0.0 0.0 0.0 0.14259651477341834 0.0 28 0.0 0.0 0.0 0.21789815024868603 0.0 29 0.0 0.0 0.0 0.29529679329415104 0.0 30 0.0 0.0 0.0 0.4607697542879039 0.0 31 0.0 0.0 0.0 0.6773334451737371 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1725 0.0 28.634785 1 ATGGGCG 35 8.8629423E-4 26.42857 19 ATCCACG 80 2.7186616E-8 23.125 1 ATAGTCG 40 0.0019297956 23.125 20 TAGGCGC 45 0.003823078 20.555555 13 TCTATAC 45 0.003823078 20.555555 3 GTATTGG 110 1.7480488E-9 20.181818 1 CGGCTCT 85 1.2426681E-6 19.588236 6 ATTGGAC 105 2.2524546E-8 19.38095 3 CGTCTGT 150 1.2732926E-11 18.5 34 ACGGCTC 90 2.1476808E-6 18.5 5 CCCGCAT 60 9.2276925E-4 18.5 13 CACGGCT 95 3.5988305E-6 17.526316 4 TAAGCAA 75 2.0645677E-4 17.266666 10 GTATCAA 2985 0.0 17.22948 2 ATAGCCT 65 0.0015783858 17.076925 3 TTGGACC 245 0.0 16.612244 4 GCGTCTG 170 8.367351E-11 16.32353 33 GAAGACT 80 3.3781826E-4 16.1875 4 GGACCCT 260 0.0 15.653848 6 >>END_MODULE