##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088286_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2674692 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.035333040215473 31.0 30.0 33.0 27.0 34.0 2 30.817728172066168 31.0 31.0 34.0 27.0 34.0 3 30.802998251761323 31.0 31.0 34.0 27.0 34.0 4 34.96464265792099 35.0 35.0 37.0 32.0 37.0 5 34.84957669892459 35.0 35.0 37.0 32.0 37.0 6 34.94995348997193 35.0 35.0 37.0 32.0 37.0 7 34.57426612110852 35.0 35.0 37.0 30.0 37.0 8 34.79172443032693 35.0 35.0 37.0 32.0 37.0 9 36.22181170766578 38.0 35.0 39.0 32.0 39.0 10 36.136598905593615 38.0 35.0 39.0 31.0 39.0 11 36.22848051289644 38.0 35.0 39.0 32.0 39.0 12 35.96173391179246 38.0 35.0 39.0 30.0 39.0 13 36.129782793682416 38.0 35.0 39.0 31.0 39.0 14 37.0453353133744 39.0 36.0 40.0 31.0 41.0 15 37.0865011747147 39.0 36.0 40.0 31.0 41.0 16 37.00879017098043 38.0 36.0 40.0 31.0 41.0 17 37.07608464825109 39.0 36.0 40.0 31.0 41.0 18 37.06882437304931 39.0 36.0 40.0 31.0 41.0 19 37.14694551746519 39.0 36.0 40.0 31.0 41.0 20 37.10078767947861 39.0 36.0 40.0 31.0 41.0 21 37.020652845262184 39.0 36.0 40.0 31.0 41.0 22 36.94667124289451 39.0 36.0 40.0 31.0 41.0 23 36.81266478532855 39.0 35.0 40.0 31.0 41.0 24 36.74593523291654 39.0 35.0 40.0 30.0 41.0 25 36.655858319387804 38.0 35.0 40.0 30.0 41.0 26 36.40684908767066 38.0 35.0 40.0 30.0 41.0 27 36.261940440245084 38.0 35.0 40.0 30.0 41.0 28 36.11014501856663 38.0 35.0 40.0 29.0 41.0 29 35.9504290587477 38.0 34.0 40.0 29.0 41.0 30 35.7997175001832 38.0 34.0 40.0 29.0 41.0 31 35.573511267839436 38.0 34.0 40.0 27.0 41.0 32 35.348584061267616 38.0 34.0 40.0 27.0 41.0 33 35.52636453094412 38.0 34.0 40.0 27.0 41.0 34 35.528208107699875 38.0 34.0 40.0 27.0 41.0 35 35.45772859080597 38.0 34.0 40.0 27.0 41.0 36 35.39865749028299 38.0 34.0 40.0 27.0 41.0 37 35.255427540815916 38.0 34.0 40.0 26.0 41.0 38 35.15643408661633 38.0 34.0 40.0 26.0 41.0 39 35.15523843493008 38.0 34.0 40.0 26.0 41.0 40 35.03609275385727 38.0 33.0 40.0 25.0 41.0 41 34.90593197272808 38.0 33.0 40.0 25.0 41.0 42 34.73547271984961 38.0 33.0 40.0 24.0 41.0 43 34.413626316600194 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 1.0 15 16.0 16 35.0 17 87.0 18 190.0 19 519.0 20 1079.0 21 2141.0 22 3957.0 23 6900.0 24 11266.0 25 17595.0 26 26686.0 27 38580.0 28 53756.0 29 72654.0 30 92274.0 31 113437.0 32 139814.0 33 168907.0 34 201538.0 35 241381.0 36 293316.0 37 365097.0 38 437704.0 39 385758.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.74117393703649 24.446702648379702 13.01962992374449 22.79249349083932 2 18.223070170322416 22.95359615237941 35.581928685620625 23.24140499167755 3 19.822282341293874 26.70711244509648 31.53409813167273 21.93650708193691 4 13.341573534448079 16.055680429746676 35.91045249322165 34.6922935425836 5 11.757615456284313 39.91726897900767 34.993561875535576 13.331553689172434 6 32.057859372219305 36.46834850517368 15.473033904464515 16.0007582181425 7 25.104871888052905 34.23627842009472 21.97942791169974 18.67942178015263 8 27.36120644919116 33.92801862793922 20.261884359021526 18.4488905638481 9 25.349535572693977 13.628634624098776 22.879381999871388 38.14244780333586 10 16.070934522554374 27.425325981458798 34.310941222391214 22.192798273595614 11 32.42878058482995 21.723809694723727 24.634350422403774 21.21305929804254 12 20.13644935566413 26.778709473838486 31.832749340858683 21.252091829638704 13 30.718901466037956 20.812415036946312 28.1562886493099 20.31239484770583 14 21.109047322084187 22.045678530462574 27.800509367059835 29.044764780393407 15 23.276437062659923 28.853041770790806 25.963026770932878 21.907494395616393 16 22.42119840340495 28.189937383444523 26.538756611976254 22.850107601174265 17 20.117381739654512 26.912407110800046 27.554948382841836 25.415262766703606 18 21.1688299063967 26.461701010807975 31.05322033340661 21.316248749388713 19 20.58109868351197 24.905858319387804 32.168339382627984 22.344703614472245 20 24.336596512794745 24.258344512190565 30.96670569919826 20.438353275816432 21 23.794328468474127 25.017871216573724 29.949953116097106 21.237847198855047 22 22.370500977308787 24.55804257088293 30.925018656353704 22.14643779545458 23 21.619386456459285 26.320862364713392 31.58318789602691 20.476563282800413 24 20.688064270577698 25.39855056208341 30.270476002470563 23.64290916486833 25 21.64338922014198 26.291849678392875 31.048285185733537 21.016475915731604 26 22.798699812913036 25.52940675038472 29.973582004956086 21.69831143174616 27 21.56820299309229 26.72490888670546 29.752135946867902 21.95475217333435 28 21.424298573443224 26.24642388731114 29.872673190034593 22.456604349211048 29 20.69954222766584 26.07253470679989 30.771842141076434 22.456080924457844 30 20.198549963883693 26.398142290775912 32.035015620490135 21.368292124850264 31 21.440749065686816 25.87079185192164 31.28935967206691 21.39909941032463 32 22.14931663159721 26.055934664626808 29.567217459056966 22.227531244719017 33 22.94006188376082 25.931060473504985 29.242245462281264 21.886632180452928 34 21.5134303314176 28.23573704934998 29.312982578928715 20.937850040303708 35 20.5784067847812 29.141374034842144 29.3876453812252 20.892573799151453 36 21.466882915864705 26.19314672493132 31.059052780656614 21.280917578547363 37 21.45338603472848 26.530793078231063 30.32737975064045 21.688441136400005 38 21.580578249757355 26.167573686989005 30.838092759839263 21.413755303414376 39 22.305671082876085 25.619510582900762 30.89866048128158 21.17615785294157 40 20.88633008959536 26.25764013202268 30.150499571539452 22.705530206842507 41 21.88382811927504 25.81385071626939 29.971787405802235 22.33053375865333 42 19.759845245732965 27.415680011006877 30.39617271820456 22.428302025055597 43 20.380963490375713 26.993650109993972 30.004651002807055 22.62073539682326 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 141.0 1 230.0 2 319.0 3 889.0 4 1459.0 5 1459.0 6 2570.0 7 3681.0 8 4063.0 9 4445.0 10 6727.0 11 9009.0 12 9009.0 13 16410.5 14 23812.0 15 38549.0 16 53286.0 17 52709.5 18 52133.0 19 52133.0 20 56391.5 21 60650.0 22 51710.0 23 42770.0 24 47979.0 25 53188.0 26 53188.0 27 59789.5 28 66391.0 29 70534.5 30 74678.0 31 81379.0 32 88080.0 33 88080.0 34 96296.0 35 104512.0 36 113218.5 37 121925.0 38 127570.0 39 133215.0 40 133215.0 41 139736.0 42 146257.0 43 160947.0 44 175637.0 45 210060.0 46 244483.0 47 244483.0 48 249637.0 49 254791.0 50 235858.5 51 216926.0 52 206422.0 53 195918.0 54 195918.0 55 172831.5 56 149745.0 57 126836.0 58 103927.0 59 92875.5 60 81824.0 61 81824.0 62 72633.5 63 63443.0 64 55674.5 65 47906.0 66 41021.0 67 34136.0 68 34136.0 69 29238.5 70 24341.0 71 20836.0 72 17331.0 73 13957.5 74 10584.0 75 10584.0 76 8362.5 77 6141.0 78 4780.0 79 3419.0 80 2673.0 81 1927.0 82 1927.0 83 1480.5 84 1034.0 85 805.0 86 576.0 87 456.5 88 337.0 89 337.0 90 289.0 91 241.0 92 144.0 93 47.0 94 31.5 95 16.0 96 16.0 97 12.5 98 9.0 99 5.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2674692.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.58677946147521 #Duplication Level Percentage of deduplicated Percentage of total 1 73.12969479118799 32.60617573739692 2 14.286309233456834 12.739610382211536 3 5.158852213441931 6.900498177452359 4 2.47296359856787 4.410459303424069 5 1.336983156015529 2.9805886560485746 6 0.7786724739141228 2.083109872027818 7 0.49033316877731775 1.5303663801244398 8 0.36282642954353084 1.2941809597481504 9 0.2594977211246772 1.0413150896287242 >10 1.5013588300291711 12.53521807599512 >50 0.1350606268936908 4.17560365460881 >100 0.07650595242242228 6.162795259967338 >500 0.004919571071729917 1.5426203453176877 >1k 0.004919571071729039 4.219722797005013 >5k 7.633817180269199E-4 2.4899382425927428 >10k+ 3.392807635675199E-4 3.2877970664506253 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 26100 0.9758132899040338 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23785 0.889261268213312 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 21417 0.8007277099568848 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15634 0.5845158994007534 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9125 0.3411607766426938 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9113 0.3407121268542322 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8748 0.32706569578852446 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8195 0.3063904180369179 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 7691 0.2875471269215296 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6068 0.22686724303209493 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5885 0.22002533375805514 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 5711 0.21351991182536156 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5303 0.19826581901766635 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4867 0.18196487670356062 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4734 0.17699234154811097 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4545 0.16992610737984037 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3547 0.1326133999727819 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3409 0.12745392740547323 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3335 0.12468725370995987 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3132 0.11709759478848406 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3069 0.11474218339906053 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2868 0.10722729944232831 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2829 0.10576918762982804 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2796 0.10453540071155855 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 3.738748237180206E-5 0.0 4 0.0 0.0 0.0 3.738748237180206E-5 0.0 5 0.0 0.0 0.0 3.738748237180206E-5 0.0 6 0.0 0.0 0.0 3.738748237180206E-5 0.0 7 0.0 0.0 0.0 1.1216244711540618E-4 0.0 8 3.738748237180206E-5 0.0 0.0 1.1216244711540618E-4 0.0 9 2.990998589744165E-4 0.0 0.0 1.4954992948720824E-4 0.0 10 2.990998589744165E-4 0.0 0.0 2.990998589744165E-4 0.0 11 3.3648734134621855E-4 0.0 0.0 4.1126230608982267E-4 0.0 12 3.3648734134621855E-4 0.0 0.0 5.234247532052289E-4 0.0 13 3.738748237180206E-4 0.0 0.0 5.608122355770309E-4 0.0 14 4.1126230608982267E-4 0.0 0.0 6.729746826924371E-4 0.0 15 4.1126230608982267E-4 0.0 0.0 9.720745416668536E-4 0.0 16 4.1126230608982267E-4 0.0 0.0 0.001233786918269468 0.0 17 4.1126230608982267E-4 0.0 0.0 0.0019815365657055092 0.0 18 4.1126230608982267E-4 0.0 0.0 0.0022806364246799257 0.0 19 5.98199717948833E-4 0.0 0.0 0.002953611107372363 0.0 20 5.98199717948833E-4 0.0 0.0 0.003551810825321196 0.0 21 5.98199717948833E-4 0.0 0.0 0.0051968600496804865 0.0 22 5.98199717948833E-4 0.0 0.0 0.008449571016027266 0.0 23 5.98199717948833E-4 0.0 0.0 0.013908143442310367 0.0 24 5.98199717948833E-4 0.0 0.0 0.02232032697596583 0.0 25 5.98199717948833E-4 0.0 0.0 0.026358175072120453 0.0 26 5.98199717948833E-4 0.0 0.0 0.032003684910262564 0.0 27 5.98199717948833E-4 0.0 0.0 0.07223261594232158 0.0 28 6.35587200320635E-4 0.0 0.0 0.1158638078702146 0.0 29 6.35587200320635E-4 0.0 0.0 0.16820628319073747 0.0 30 6.729746826924371E-4 0.0 0.0 0.26174976408498624 0.0 31 6.729746826924371E-4 0.0 0.0 0.39402667671642194 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5950 0.0 29.44454 1 ATTGGAC 1070 0.0 21.957943 3 GTATTGG 1125 0.0 21.213333 1 CGTATCG 65 6.9065085E-5 19.923077 10 TTGGACC 1715 0.0 18.87755 4 TATTGGA 1275 0.0 18.42745 2 CGGACCA 95 3.6100082E-6 17.526316 9 GTATCAA 10345 0.0 17.38231 2 TGGACCC 1880 0.0 16.728722 5 GGACCCT 1795 0.0 16.696377 6 CGTCTGT 490 0.0 16.612246 34 CCGATAA 95 7.065276E-5 15.578948 9 ACCGTTA 95 7.065276E-5 15.578948 8 ACGAACG 95 7.065276E-5 15.578948 15 TATACCG 195 4.1836756E-11 15.179487 5 ACGTTTA 160 1.0983058E-8 15.03125 26 TCCGACG 185 3.0559022E-10 15.0 23 TCCGATA 100 1.09422566E-4 14.8 8 GACCCTC 2005 0.0 14.486285 7 GGCGTAA 90 8.2790747E-4 14.388889 13 >>END_MODULE