##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088284_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 909532 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.502014222699145 31.0 30.0 31.0 26.0 34.0 2 30.1518231354147 31.0 30.0 31.0 26.0 34.0 3 30.092658642026887 31.0 30.0 31.0 26.0 34.0 4 34.17401696696763 35.0 33.0 37.0 30.0 37.0 5 33.927965151308584 35.0 33.0 37.0 30.0 37.0 6 34.21615512153503 35.0 35.0 37.0 30.0 37.0 7 33.875139082517165 35.0 33.0 37.0 29.0 37.0 8 34.14978912231785 35.0 33.0 37.0 30.0 37.0 9 35.39835431848467 37.0 34.0 39.0 30.0 39.0 10 35.22949384958418 37.0 34.0 39.0 29.0 39.0 11 35.4656559637264 37.0 34.0 39.0 30.0 39.0 12 35.1201969804251 37.0 34.0 39.0 29.0 39.0 13 35.3425289049753 37.0 34.0 39.0 30.0 39.0 14 36.03627909738195 38.0 34.0 40.0 29.0 41.0 15 36.146834855728 38.0 34.0 40.0 29.0 41.0 16 35.93501273182252 38.0 34.0 40.0 29.0 41.0 17 36.09446946341635 38.0 34.0 40.0 29.0 41.0 18 36.09542819823822 38.0 34.0 40.0 29.0 41.0 19 36.224326356851655 38.0 34.0 40.0 29.0 41.0 20 36.191803037166366 38.0 34.0 40.0 29.0 41.0 21 36.13084311492064 38.0 34.0 40.0 29.0 41.0 22 36.03696736343526 38.0 34.0 40.0 29.0 41.0 23 35.850253756877166 38.0 34.0 40.0 28.0 41.0 24 35.77084038824363 38.0 34.0 40.0 27.0 41.0 25 35.65041801717806 38.0 34.0 40.0 27.0 41.0 26 35.36616633609373 38.0 34.0 40.0 27.0 41.0 27 35.11763302445653 37.0 33.0 40.0 27.0 41.0 28 34.91054850186689 37.0 33.0 40.0 26.0 41.0 29 34.68947326757058 37.0 33.0 40.0 25.0 41.0 30 34.4957164783647 37.0 33.0 39.0 25.0 40.0 31 34.19062111063712 36.0 33.0 39.0 25.0 40.0 32 33.983888417339905 36.0 32.0 39.0 24.0 40.0 33 34.10742447764345 36.0 33.0 39.0 24.0 40.0 34 34.036127370999594 36.0 33.0 39.0 24.0 40.0 35 33.90497090811538 36.0 32.0 39.0 24.0 40.0 36 33.77192226331784 36.0 32.0 39.0 23.0 40.0 37 33.58130665001342 36.0 32.0 39.0 22.0 40.0 38 33.4231582836008 36.0 31.0 39.0 21.0 40.0 39 33.32161155407396 36.0 31.0 39.0 21.0 40.0 40 33.13483637738969 36.0 31.0 39.0 19.0 40.0 41 32.92645778268384 36.0 31.0 39.0 18.0 40.0 42 32.67153657045601 36.0 31.0 39.0 16.0 40.0 43 32.263166111802555 35.0 30.0 39.0 15.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 2.0 13 2.0 14 5.0 15 15.0 16 45.0 17 122.0 18 215.0 19 508.0 20 1021.0 21 1833.0 22 2983.0 23 4873.0 24 7696.0 25 11054.0 26 15440.0 27 20807.0 28 27387.0 29 34517.0 30 42538.0 31 50615.0 32 59037.0 33 69290.0 34 79583.0 35 92785.0 36 109677.0 37 122646.0 38 109550.0 39 45285.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.73845889974184 27.000479367410936 14.138260116191622 19.1228016166556 2 22.737847596346253 25.245510878121934 30.817717243593407 21.198924281938403 3 25.518178579753105 26.092210059679044 30.589577936785073 17.80003342378278 4 18.0289423571683 18.43123716372816 31.353047501352343 32.1867729777512 5 11.053157008219612 43.56735112123597 32.969263313440315 12.410228557104093 6 32.56641877361105 35.44207350593492 14.396414859510164 17.59509286094387 7 23.58641587101938 36.71217725159753 21.125589863798087 18.57581701358501 8 29.176763434381638 34.58723827199043 19.538290021681483 16.69770827194645 9 25.333907987844295 13.231530061614105 24.09810759819336 37.33645435234824 10 17.528355242036564 29.281212755570994 32.101674267645336 21.0887577347471 11 31.801409955889405 20.989365959636388 24.564831143928966 22.644392940545245 12 18.129433598817855 28.857588298157733 32.598303303237266 20.414674799787143 13 31.939502953167125 20.130242806190438 30.259847921788346 17.67040631885409 14 20.554966730142535 22.52806938073647 29.518037848036133 27.398926041084863 15 24.499192991560495 28.260138180954602 27.661478650558745 19.579190176926158 16 21.298755843664654 28.20384549416623 28.69761591675719 21.799782745411928 17 18.321070616536854 27.279414028313465 29.718470598065817 24.681044757083864 18 19.291129943751294 25.92047338631296 33.66346648606096 21.124930183874785 19 18.995703284766233 23.86315159884424 35.99675437477735 21.14439074161217 20 23.799492486245676 23.216555327355167 34.90278516863618 18.08116701776298 21 22.413175127428172 23.85226688010977 33.45830602991428 20.27625196254777 22 21.018721716223286 22.867364754621057 35.451089131553374 20.662824397602282 23 20.09088190410013 25.99853551057027 35.95937251245695 17.95121007287264 24 19.03616365339537 24.191892093956014 33.82618753380859 22.94575671884002 25 19.828109401318482 26.48274057427336 34.68992844671766 18.999221577690502 26 21.957995980350333 24.101186104502094 33.25743349326907 20.683384421878504 27 21.203322148093743 26.240747989075704 32.93155161115827 19.62437825167229 28 20.280319988741464 25.816243958431368 33.42136395420942 20.482072098617753 29 19.057383357594894 24.68038507716056 35.51584771069077 20.74638385455377 30 18.663004710114652 25.19746419037483 36.56814713501009 19.571383964500424 31 19.785120259650018 25.089056789645664 34.56634840775256 20.55947454295176 32 21.51095288565988 25.979404792794536 32.532115417599385 19.977526903946206 33 22.94696613203274 25.703218798239096 31.43165935887907 19.918155710849096 34 20.836430164084383 28.586020063065398 31.901021624307884 18.676528148542324 35 19.47298170927466 28.95829943311505 32.12883109115457 19.439887766455715 36 20.449417942414343 24.99879058680728 35.318053680354296 19.233737790424087 37 20.72868244327852 25.798982333771654 33.79727156383723 19.6750636591126 38 20.991564892714052 25.571172866924968 33.94789847965767 19.489363760703306 39 22.028911572105216 25.165579660748605 33.5763887361852 19.229120030960978 40 20.4376536504488 25.945211383436757 31.704546953818006 21.912588012296432 41 21.655092948901196 26.248664148155314 31.434188131918393 20.662054771025097 42 19.002739870614775 28.538303215279946 30.73569703979629 21.723259874308987 43 20.80388595453486 27.16265068188915 30.63762462453218 21.395838739043814 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 74.0 1 77.0 2 80.0 3 192.0 4 304.0 5 304.0 6 779.0 7 1254.0 8 1480.5 9 1707.0 10 2909.5 11 4112.0 12 4112.0 13 8632.5 14 13153.0 15 21628.5 16 30104.0 17 27159.0 18 24214.0 19 24214.0 20 29271.5 21 34329.0 22 26130.0 23 17931.0 24 18789.5 25 19648.0 26 19648.0 27 21054.5 28 22461.0 29 23378.0 30 24295.0 31 25577.5 32 26860.0 33 26860.0 34 29203.5 35 31547.0 36 34151.5 37 36756.0 38 38267.5 39 39779.0 40 39779.0 41 42488.5 42 45198.0 43 52499.0 44 59800.0 45 78136.5 46 96473.0 47 96473.0 48 94788.0 49 93103.0 50 83257.0 51 73411.0 52 68439.0 53 63467.0 54 63467.0 55 54465.5 56 45464.0 57 37880.5 58 30297.0 59 26056.5 60 21816.0 61 21816.0 62 19235.0 63 16654.0 64 14303.0 65 11952.0 66 10117.5 67 8283.0 68 8283.0 69 7020.0 70 5757.0 71 4781.0 72 3805.0 73 3060.5 74 2316.0 75 2316.0 76 1842.0 77 1368.0 78 1080.5 79 793.0 80 619.5 81 446.0 82 446.0 83 337.5 84 229.0 85 178.5 86 128.0 87 112.5 88 97.0 89 97.0 90 75.5 91 54.0 92 31.5 93 9.0 94 6.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 909532.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.569218574059285 #Duplication Level Percentage of deduplicated Percentage of total 1 81.45130434475406 39.56026203862585 2 10.346343540432938 10.050276417151876 3 3.2218200148582232 4.6944384152378404 4 1.4386465163249473 2.794957484087813 5 0.7702412944753887 1.8705008893070763 6 0.4960398478840082 1.4455360675992908 7 0.3352758902759712 1.1398861598198176 8 0.26637011556807055 1.034991069169844 9 0.20443704171156943 0.8936412627170962 >10 1.2828978407207525 11.910975404648061 >50 0.11224834951982926 3.730939746157722 >100 0.05977393653640387 5.668833869481126 >500 0.006844343877152063 2.2479648292663783 >1k 0.006388054285341924 5.760583012721013 >5k 6.844343877152062E-4 2.3557811539509634 >10k+ 6.844343877152062E-4 4.840432180058323 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18435 2.026866564342981 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14199 1.5611325384923234 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 11049 1.214800578759186 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9246 1.0165667618071712 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 6348 0.6979413588526846 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5666 0.6229577409041134 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 4660 0.5123514070972764 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4525 0.49750860882299913 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3534 0.3885514748244152 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3086 0.3392953738845912 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2959 0.3253321488413822 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2348 0.2581547433185419 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2235 0.24573077142970232 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 2088 0.22956861330882256 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2033 0.22352154734522808 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1754 0.19284643091172163 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1560 0.17151678005831572 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1532 0.1684382737495767 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1503 0.1652498207869542 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1482 0.16294094105539994 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1457 0.16019227470831152 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1386 0.1523860622825805 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1328 0.1460091563573354 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1293 0.14216102347141166 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1260 0.138532783893255 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1249 0.1373233707005361 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1159 0.12742817185101787 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 1130 0.12423971888839536 No Hit TTGCTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCC 1129 0.12412977223451181 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 1123 0.12347009231121062 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 1097 0.12061147931023868 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1039 0.1142345733849936 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1028 0.11302516019227472 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 1010 0.11104612042237107 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 964 0.10598857434372842 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.099466538835357E-4 0.0 3 0.0 0.0 0.0 1.099466538835357E-4 0.0 4 0.0 0.0 0.0 1.099466538835357E-4 0.0 5 0.0 0.0 0.0 1.099466538835357E-4 0.0 6 1.099466538835357E-4 0.0 0.0 1.099466538835357E-4 0.0 7 1.099466538835357E-4 0.0 0.0 1.099466538835357E-4 0.0 8 1.099466538835357E-4 0.0 0.0 1.099466538835357E-4 0.0 9 1.099466538835357E-4 0.0 0.0 1.099466538835357E-4 0.0 10 1.099466538835357E-4 0.0 0.0 2.198933077670714E-4 0.0 11 1.099466538835357E-4 0.0 0.0 3.2983996165060714E-4 0.0 12 1.099466538835357E-4 0.0 0.0 3.2983996165060714E-4 0.0 13 1.099466538835357E-4 0.0 0.0 3.2983996165060714E-4 0.0 14 1.099466538835357E-4 0.0 0.0 5.497332694176785E-4 0.0 15 1.099466538835357E-4 0.0 0.0 7.6962657718475E-4 0.0 16 1.099466538835357E-4 0.0 0.0 0.001099466538835357 0.0 17 1.099466538835357E-4 0.0 0.0 0.0017591464621365713 0.0 18 1.099466538835357E-4 0.0 0.0 0.0017591464621365713 0.0 19 1.099466538835357E-4 0.0 0.0 0.001869093116020107 0.0 20 1.099466538835357E-4 0.0 0.0 0.0023088797315542497 0.0 21 1.099466538835357E-4 0.0 0.0 0.0027486663470883926 0.0 22 1.099466538835357E-4 0.0 0.0 0.004287919501457893 0.0 23 1.099466538835357E-4 0.0 0.0 0.0067067458868956785 0.0 24 1.099466538835357E-4 0.0 0.0 0.011984185273305392 0.0 25 1.099466538835357E-4 0.0 0.0 0.014512958312626714 0.0 26 2.198933077670714E-4 0.0 0.0 0.01715167800583157 0.0 27 2.198933077670714E-4 0.0 0.0 0.03518292924273143 0.0 28 2.198933077670714E-4 0.0 0.0 0.05662252675002089 0.0 29 2.198933077670714E-4 0.0 0.0 0.08531860341362371 0.0 30 2.198933077670714E-4 0.0 0.0 0.14611910301121897 0.0 31 2.198933077670714E-4 0.0 0.0 0.2130766152262922 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3535 0.0 31.033949 1 TGCGTCG 30 3.598893E-4 30.833334 25 CCGTATA 45 4.007048E-6 28.777779 2 CCCGTAT 45 1.3229155E-4 24.666668 1 CGTATAC 55 1.9020927E-5 23.545454 3 AGTATCA 145 0.0 21.689655 1 GTATCAA 5250 0.0 21.460001 2 GGCGTAG 55 5.1419594E-4 20.181818 1 AGTACGT 65 6.900105E-5 19.923077 7 GTGGTAT 485 0.0 18.690722 1 CGGTATA 50 0.00703378 18.5 21 GTTATAC 60 9.2347944E-4 18.5 3 GGACCCT 490 0.0 17.7449 6 TTGGACC 475 0.0 17.526316 4 GCCCCGA 75 2.0666685E-4 17.266666 11 CCCCGAA 75 2.0666685E-4 17.266666 12 GTAAGAT 75 2.0666685E-4 17.266666 3 AGGCCGT 65 0.0015795911 17.076923 6 CGAATTA 65 0.0015795911 17.076923 15 GCTAACG 65 0.0015795911 17.076923 26 >>END_MODULE