##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088283_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2414591 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.875986036558572 31.0 30.0 33.0 27.0 34.0 2 30.720668634977933 31.0 31.0 34.0 27.0 34.0 3 30.723325399622546 31.0 30.0 34.0 27.0 34.0 4 34.912281210358195 35.0 35.0 37.0 32.0 37.0 5 34.81631216218399 35.0 35.0 37.0 32.0 37.0 6 34.92907038914665 35.0 35.0 37.0 32.0 37.0 7 34.55008322320426 35.0 35.0 37.0 30.0 37.0 8 34.77896960603266 35.0 35.0 37.0 32.0 37.0 9 36.17451195668335 38.0 35.0 39.0 32.0 39.0 10 36.11282076343364 38.0 35.0 39.0 31.0 39.0 11 36.205879587888795 38.0 35.0 39.0 32.0 39.0 12 35.93698560128817 37.0 35.0 39.0 30.0 39.0 13 36.10985007398769 38.0 35.0 39.0 31.0 39.0 14 36.97745456683968 38.0 36.0 40.0 31.0 41.0 15 37.03326319032913 38.0 36.0 40.0 31.0 41.0 16 36.93967715443319 38.0 36.0 40.0 31.0 41.0 17 37.06331382830467 39.0 36.0 40.0 31.0 41.0 18 37.070350630810765 39.0 36.0 40.0 31.0 41.0 19 37.17981306150814 39.0 36.0 40.0 31.0 41.0 20 37.13964642459116 39.0 36.0 40.0 31.0 41.0 21 37.06684776013826 39.0 36.0 40.0 31.0 41.0 22 37.00067009278176 39.0 36.0 40.0 31.0 41.0 23 36.863908628831965 39.0 35.0 40.0 31.0 41.0 24 36.80016615650435 39.0 35.0 40.0 30.0 41.0 25 36.70927581524159 38.0 35.0 40.0 30.0 41.0 26 36.44156298105973 38.0 35.0 40.0 30.0 41.0 27 36.287249062056475 38.0 35.0 40.0 30.0 41.0 28 36.116338129314656 38.0 35.0 40.0 30.0 41.0 29 35.950426801060715 38.0 34.0 40.0 29.0 41.0 30 35.78915601027255 38.0 34.0 40.0 29.0 41.0 31 35.52345304028715 38.0 34.0 40.0 27.0 41.0 32 35.27544002276162 37.0 34.0 40.0 27.0 41.0 33 35.38206760482417 38.0 34.0 40.0 27.0 41.0 34 35.35909725498024 38.0 34.0 40.0 27.0 41.0 35 35.26495791626822 38.0 34.0 40.0 27.0 41.0 36 35.171947547224356 38.0 34.0 40.0 26.0 41.0 37 35.007045499631204 38.0 33.0 40.0 25.0 41.0 38 34.87596822815955 38.0 33.0 40.0 25.0 41.0 39 34.8190004021385 38.0 33.0 40.0 24.0 41.0 40 34.652418152805176 38.0 33.0 40.0 24.0 41.0 41 34.479103500344365 38.0 33.0 40.0 23.0 41.0 42 34.276973615821476 38.0 33.0 40.0 22.0 41.0 43 33.92720837607694 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 4.0 15 9.0 16 30.0 17 85.0 18 202.0 19 475.0 20 1011.0 21 2028.0 22 3730.0 23 6625.0 24 10635.0 25 16916.0 26 25302.0 27 36508.0 28 50805.0 29 67971.0 30 87009.0 31 105749.0 32 128498.0 33 155133.0 34 185138.0 35 219044.0 36 265990.0 37 330450.0 38 378315.0 39 336927.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.779196973731786 25.613240503257074 14.12789992176729 21.479662601243852 2 18.01907652269059 23.39613624005059 36.043826884138966 22.540960353119846 3 20.147760014014796 26.470197230089898 32.28658600980456 21.095456746090747 4 13.28046861766651 16.14778651953892 35.11443552966113 35.45730933313344 5 10.955105854366225 40.963997629412184 34.67870956199207 13.402186954229514 6 31.57350458110711 36.00775452240151 15.22949435328799 17.18924654320338 7 23.73217658808469 35.95296263425152 21.48409399355833 18.830766784105464 8 27.462207885310598 34.07914632333178 20.256515492685924 18.2021302986717 9 24.868186786085097 13.890841140383609 24.197679855511762 37.04329221801953 10 16.36148730778836 28.223951799704384 33.77391864709178 21.640642245415474 11 31.00699041783888 21.966163213562876 25.28241843028488 21.74442793831336 12 19.79589918126921 27.76105766980826 31.990096873549184 20.452946275373346 13 30.84410568912085 21.338769174572423 29.214927082888988 18.602198053417744 14 20.432404494177277 23.187198163167178 28.865799632318684 27.514597710336865 15 22.774208965410704 29.302519557142393 27.34048954874759 20.582781928699312 16 21.232084439973477 28.736502372451483 27.755715150102027 22.275698037473013 17 18.763053452945034 27.492275089238717 28.52980069916603 25.21487075865022 18 19.905814276620763 26.696032578602342 33.103535961162784 20.29461718361412 19 19.20010469682029 25.10768904547395 34.57894111259422 21.11326514511153 20 23.821342827832954 23.938422697674262 33.35256364328369 18.887670831209093 21 23.05959891343917 24.874606092708866 31.854048988006667 20.211746005845296 22 21.314872787979414 24.563994481881195 32.72529384893757 21.395838881201826 23 20.308408339134868 26.876352972408164 33.85111598610282 18.964122702354146 24 19.02318032329285 25.750075271547026 32.25618748682489 22.970556918335237 25 20.109244174272163 26.795469708948637 33.47121727861986 19.62406883815934 26 21.690878496606672 25.585533947571243 31.915508672069098 20.808078883752984 27 20.37802675484171 27.08375869867816 31.564227647663724 20.973986898816406 28 20.024923475652812 26.471522506296097 31.825389890047635 21.67816412800346 29 19.12377707031957 26.327522963516387 32.8280855846808 21.72061438148324 30 18.476586717999034 26.592371130348784 34.811154352848995 20.119887798803195 31 19.881048177517435 26.00167067631744 33.610122790982 20.507158355183133 32 21.001983358672337 26.414245725259473 31.477546300802082 21.106224615266107 33 22.14433003353363 26.19441553455637 30.88589330449753 20.77536112741247 34 20.206900464716384 29.09925531901676 31.002434780880073 19.69140943538678 35 18.88974157528128 29.829358263987565 31.226944853186318 20.05395530754484 36 19.924036824455985 25.99380184884314 33.48231646684677 20.59984485985411 37 19.910038594528018 26.31439444609874 32.56307175832263 21.21249520105061 38 20.2425586776394 25.923437965270306 33.19713359322552 20.63686976386477 39 21.26422238797378 25.347936772728797 33.0955014741627 20.292339365134715 40 19.47116509586924 26.1505571751075 32.19443789859235 22.18383983043091 41 20.45389881764655 25.636722741035644 31.957379117208667 21.951999324109135 42 17.890524730689382 27.393624841639845 32.34825276827421 22.36759765939656 43 18.640879552686147 27.14422442558595 32.010224505930815 22.204671515797088 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 248.0 1 319.5 2 391.0 3 1016.5 4 1642.0 5 1642.0 6 3032.0 7 4422.0 8 4934.5 9 5447.0 10 8501.5 11 11556.0 12 11556.0 13 21244.0 14 30932.0 15 50271.5 16 69611.0 17 66933.0 18 64255.0 19 64255.0 20 69016.0 21 73777.0 22 59239.0 23 44701.0 24 48696.0 25 52691.0 26 52691.0 27 58072.5 28 63454.0 29 65870.0 30 68286.0 31 72421.5 32 76557.0 33 76557.0 34 83969.5 35 91382.0 36 98746.5 37 106111.0 38 110579.5 39 115048.0 40 115048.0 41 119955.0 42 124862.0 43 143275.0 44 161688.0 45 204082.0 46 246476.0 47 246476.0 48 247685.0 49 248894.0 50 224455.0 51 200016.0 52 184636.5 53 169257.0 54 169257.0 55 145620.5 56 121984.0 57 99326.5 58 76669.0 59 66413.5 60 56158.0 61 56158.0 62 48924.5 63 41691.0 64 35935.0 65 30179.0 66 25459.5 67 20740.0 68 20740.0 69 17295.0 70 13850.0 71 11528.5 72 9207.0 73 7396.5 74 5586.0 75 5586.0 76 4418.0 77 3250.0 78 2499.0 79 1748.0 80 1361.0 81 974.0 82 974.0 83 705.5 84 437.0 85 334.0 86 231.0 87 172.0 88 113.0 89 113.0 90 82.0 91 51.0 92 30.5 93 10.0 94 9.0 95 8.0 96 8.0 97 4.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2414591.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.62018826055735 #Duplication Level Percentage of deduplicated Percentage of total 1 73.14911352752146 30.44479876108326 2 13.78566007596257 11.475235353152229 3 5.358021597065958 6.69005602722052 4 2.564971086857141 4.270183180715224 5 1.3986139391946064 2.910528772655961 6 0.846629879024861 2.1142136971216563 7 0.5252662252877939 1.5303175428373217 8 0.36902942276849987 1.2287259239447819 9 0.26811192229526387 1.0042981812745924 >10 1.4961345509096005 11.625645214627244 >50 0.13961196486300823 4.050569201912105 >100 0.08381215103262887 6.837292526359111 >500 0.0062514546807570185 1.8714139715459284 >1k 0.007259753822814599 5.887186177788313 >5k 0.0010082991420575834 3.104657062137043 >10k+ 5.041495710287917E-4 4.954878405624696 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33465 1.3859490075130738 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30847 1.2775248478934942 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26465 1.0960448374072462 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15646 0.647977235067968 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11647 0.4823591241746532 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 9600 0.39758286185942054 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8995 0.3725268585859883 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8900 0.36859244484883774 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8841 0.36614896684366005 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7149 0.2960749874409372 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6716 0.2781423437758196 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6578 0.27242709013659044 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6412 0.26555221981693794 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5398 0.22355753003303666 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5392 0.2233090407443745 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4581 0.18972157189354222 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4431 0.18350933967698876 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4077 0.16884847164592265 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4070 0.16855856747581682 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3735 0.1546845821921808 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3420 0.14163889453741857 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3088 0.1278891538981136 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3086 0.12780632413522622 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3031 0.12552850565582327 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2967 0.12287795324342715 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2955 0.12238097466610287 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2656 0.10999792511443968 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2565 0.1062291709030639 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2497 0.10341295896489301 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2430 0.10063816190816581 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.141488144368964E-5 0.0 3 0.0 0.0 0.0 4.141488144368964E-5 0.0 4 0.0 0.0 0.0 4.141488144368964E-5 0.0 5 0.0 0.0 0.0 4.141488144368964E-5 0.0 6 0.0 0.0 0.0 4.141488144368964E-5 0.0 7 0.0 0.0 0.0 8.282976288737928E-5 0.0 8 4.141488144368964E-5 0.0 0.0 8.282976288737928E-5 0.0 9 4.141488144368964E-5 0.0 0.0 2.070744072184482E-4 0.0 10 4.141488144368964E-5 0.0 0.0 4.55563695880586E-4 0.0 11 4.141488144368964E-5 0.0 0.0 6.626381030990342E-4 0.0 12 4.141488144368964E-5 0.0 0.0 9.11127391761172E-4 0.0 13 4.141488144368964E-5 0.0 0.0 0.0012010315618669995 0.0 14 4.141488144368964E-5 0.0 0.0 0.0014081059690854475 0.0 15 4.141488144368964E-5 0.0 0.0 0.0025677226495087573 0.0 16 4.141488144368964E-5 0.0 0.0 0.004141488144368963 0.0 17 4.141488144368964E-5 0.0 0.0 0.006460721505215583 0.0 18 4.141488144368964E-5 0.0 0.0 0.007040529845427238 0.0 19 8.282976288737928E-5 0.0 0.0 0.008448635814512686 0.0 20 8.282976288737928E-5 0.0 0.0 0.010436550123809788 0.0 21 8.282976288737928E-5 0.0 0.0 0.015323506134165166 0.0 22 8.282976288737928E-5 0.0 0.0 0.02633986459818661 0.0 23 8.282976288737928E-5 0.0 0.0 0.04191186002101391 0.0 24 8.282976288737928E-5 0.0 0.0 0.063116279320183 0.0 25 8.282976288737928E-5 0.0 0.0 0.07301443598522482 0.0 26 8.282976288737928E-5 0.0 0.0 0.08581163435132493 0.0 27 8.282976288737928E-5 0.0 0.0 0.17178892822842462 0.0 28 8.282976288737928E-5 0.0 0.0 0.25598538220344563 0.0 29 8.282976288737928E-5 0.0 0.0 0.34908603568885993 0.0 30 8.282976288737928E-5 0.0 0.0 0.5407955218916992 0.0 31 8.282976288737928E-5 0.0 0.0 0.7983960844714488 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7520 0.0 30.456118 1 ATTGGAC 755 0.0 21.562912 3 GTATTGG 735 0.0 20.891155 1 TATTGGA 885 0.0 19.231638 2 GTATCAA 12990 0.0 18.215166 2 GGACCCT 1425 0.0 18.045614 6 TTGGACC 1470 0.0 17.870749 4 GTTCGCG 65 0.001580615 17.076923 37 TGGACCC 1555 0.0 16.655947 5 TCGACGA 80 3.3844952E-4 16.1875 37 GACCCTC 1630 0.0 15.549079 7 ACGGACC 120 1.9375511E-6 15.416666 8 CTAGTAC 265 0.0 15.358491 3 AGTATCA 460 0.0 14.880435 1 TTTTTAC 1625 0.0 14.686153 1 CGAATTA 130 4.448553E-6 14.230769 15 CGATCGA 105 1.6568229E-4 14.095238 1 ATTCGTC 120 3.303318E-5 13.874999 17 CGGGATA 120 3.303318E-5 13.874999 24 CGTCTGT 780 0.0 13.519231 34 >>END_MODULE