##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088282_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2248047 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.838336565027333 31.0 30.0 33.0 27.0 34.0 2 30.665155577263288 31.0 30.0 34.0 27.0 34.0 3 30.695790168088124 31.0 30.0 34.0 27.0 34.0 4 34.88360519152847 35.0 35.0 37.0 32.0 37.0 5 34.78450939860243 35.0 35.0 37.0 32.0 37.0 6 34.89748746356282 35.0 35.0 37.0 32.0 37.0 7 34.508213573826524 35.0 35.0 37.0 30.0 37.0 8 34.75234058718523 35.0 35.0 37.0 31.0 37.0 9 36.11036868891086 38.0 35.0 39.0 31.0 39.0 10 36.06437320927899 37.0 35.0 39.0 31.0 39.0 11 36.16946398362668 38.0 35.0 39.0 31.0 39.0 12 35.907959219713824 37.0 35.0 39.0 30.0 39.0 13 36.07180810721484 37.0 35.0 39.0 31.0 39.0 14 36.90692810248184 38.0 36.0 40.0 31.0 41.0 15 36.94781915146792 38.0 36.0 40.0 31.0 41.0 16 36.830993747016855 38.0 36.0 40.0 31.0 41.0 17 37.00478326298338 38.0 36.0 40.0 31.0 41.0 18 37.02256892315864 38.0 36.0 40.0 31.0 41.0 19 37.1372542477982 39.0 36.0 40.0 31.0 41.0 20 37.10086977718882 39.0 36.0 40.0 31.0 41.0 21 37.02219704481268 39.0 36.0 40.0 31.0 41.0 22 36.962381124593925 39.0 36.0 40.0 31.0 41.0 23 36.82148816283645 39.0 35.0 40.0 31.0 41.0 24 36.75783113075483 38.0 35.0 40.0 30.0 41.0 25 36.66205199446453 38.0 35.0 40.0 30.0 41.0 26 36.374742165088186 38.0 35.0 40.0 30.0 41.0 27 36.2046198322366 38.0 35.0 40.0 30.0 41.0 28 36.01130180997105 38.0 34.0 40.0 30.0 41.0 29 35.83936590293708 38.0 34.0 40.0 29.0 41.0 30 35.66535352686132 38.0 34.0 40.0 29.0 41.0 31 35.37479198611061 38.0 34.0 40.0 27.0 41.0 32 35.14619934547632 37.0 34.0 40.0 27.0 41.0 33 35.19852387427843 37.0 33.0 40.0 27.0 41.0 34 35.15706744565394 37.0 33.0 40.0 27.0 41.0 35 35.02199598140074 37.0 33.0 40.0 26.0 41.0 36 34.911434236027986 37.0 33.0 40.0 25.0 41.0 37 34.72523261301921 37.0 33.0 40.0 25.0 41.0 38 34.56352291566858 37.0 33.0 40.0 24.0 41.0 39 34.4641740141554 37.0 33.0 40.0 24.0 41.0 40 34.25109706336211 37.0 33.0 40.0 23.0 41.0 41 34.060093939317106 37.0 33.0 40.0 21.0 41.0 42 33.817582105712205 37.0 33.0 40.0 20.0 41.0 43 33.45349808077856 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 2.0 12 0.0 13 1.0 14 2.0 15 14.0 16 29.0 17 91.0 18 229.0 19 495.0 20 1144.0 21 2206.0 22 3938.0 23 6613.0 24 10979.0 25 16966.0 26 25708.0 27 36523.0 28 50157.0 29 67133.0 30 84725.0 31 102448.0 32 122892.0 33 146880.0 34 174295.0 35 204755.0 36 246946.0 37 306491.0 38 341618.0 39 294766.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.483249238116464 25.569839064752646 14.19191858533207 20.754993111798818 2 18.252287429933627 23.17625031860989 35.90169600546608 22.66976624599041 3 20.40219799675007 26.598376279499497 32.440069091082165 20.559356632668266 4 12.997948886299977 15.913412842347158 34.291809735294684 36.796828536058186 5 10.529005843739032 41.62386284628391 34.13972216773048 13.707409142246583 6 31.606100762128193 35.410202722629904 14.90791785047199 18.07577866476991 7 23.570815022995514 36.7154245440598 20.92376182526433 18.789998607680356 8 28.481344028839256 33.447743752688446 19.679214891859466 18.39169732661283 9 24.970474371754683 13.521514452322394 24.508918185429394 36.99909299049352 10 16.539734267121638 28.41239529244718 32.91843987247597 22.129430567955207 11 30.420983191187727 21.512050237383825 25.577801531729545 22.489165039698904 12 20.17248749692511 28.108753953987613 31.93220604373485 19.78655250535242 13 31.611483211872347 20.883771558156923 29.753737355135367 17.751007874835356 14 20.6698080600628 22.995293247872485 29.373540677752736 26.961358014311976 15 23.225893408812183 28.58885957455516 28.2801471677416 19.90509984889106 16 21.164459639856283 28.395936561824552 28.167871935061857 22.27173186325731 17 18.348103931990746 27.23795365488355 28.546378256326495 25.86756415679921 18 19.52512558678711 26.089000808257122 34.128245539350374 20.25762806560539 19 18.781324411811674 24.318753122154472 36.1262909538813 20.773631512152548 20 24.42511210842122 22.598771289034435 34.57623439367593 18.39988220886841 21 23.498752472701863 23.889358185126913 32.91252362606298 19.69936571610825 22 21.362720619275308 23.353203914330972 34.0295821217261 21.254493344667615 23 20.172176115534953 25.991449467026268 35.23035772828593 18.606016689152852 24 18.340808710849906 24.90668566982808 33.38649058493884 23.366015034383178 25 19.905010882779585 26.14109046652494 34.97787190392372 18.976026746771755 26 21.7729433592803 24.54459359613033 33.11065115631479 20.571811888274578 27 20.3031787146799 26.446555610269712 32.484552146819 20.765713528231394 28 19.6103996046346 25.79994991207924 32.87320060479163 21.716449878494533 29 18.588712780471226 25.712051393943273 34.0940825525445 21.605153273041 30 17.772760089090664 25.946388131564863 36.55372863645645 19.727123142888026 31 19.508355474774326 25.29493378029908 34.744424827416864 20.452285917509734 32 21.103962684054203 25.78002150310914 32.2471905614073 20.868825251429353 33 22.35055583802296 25.46592664655143 31.65712282705833 20.52639468836728 34 19.998647715105598 29.02216902048756 31.795776511790013 19.183406752616825 35 18.263630609146517 29.992211016940484 32.00395721263835 19.740201161274655 36 19.448125417306667 25.4472882461977 34.91862047368227 20.185965862813365 37 19.586512203703926 25.943674665164917 33.635284315674895 20.83452881545626 38 20.105318082762505 25.49782099751473 34.151332245277786 20.245528674444973 39 21.290524619814445 25.024254386140505 33.7220262743617 19.96319471968335 40 19.32397320874519 25.839495348629278 32.63268072242262 22.203850720202915 41 20.38565030001597 25.527669127914145 32.349901937103624 21.73677863496626 42 17.37717227442309 27.433234269568207 32.92484543250208 22.264748023506627 43 18.330444158863227 27.149654789245954 32.646559435812506 21.873341616078314 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 174.0 1 258.0 2 342.0 3 1017.0 4 1692.0 5 1692.0 6 3151.0 7 4610.0 8 5361.5 9 6113.0 10 9442.0 11 12771.0 12 12771.0 13 23751.0 14 34731.0 15 55900.5 16 77070.0 17 73570.5 18 70071.0 19 70071.0 20 73504.0 21 76937.0 22 59186.5 23 41436.0 24 43430.0 25 45424.0 26 45424.0 27 48529.5 28 51635.0 29 53242.0 30 54849.0 31 57957.5 32 61066.0 33 61066.0 34 66725.0 35 72384.0 36 78821.5 37 85259.0 38 90084.0 39 94909.0 40 94909.0 41 101123.5 42 107338.0 43 127906.0 44 148474.0 45 198672.0 46 248870.0 47 248870.0 48 250232.5 49 251595.0 50 224820.5 51 198046.0 52 180650.5 53 163255.0 54 163255.0 55 138629.0 56 114003.0 57 90660.0 58 67317.0 59 58053.0 60 48789.0 61 48789.0 62 42550.0 63 36311.0 64 31066.5 65 25822.0 66 21483.0 67 17144.0 68 17144.0 69 14488.0 70 11832.0 71 9750.0 72 7668.0 73 6107.5 74 4547.0 75 4547.0 76 3591.0 77 2635.0 78 2048.5 79 1462.0 80 1136.5 81 811.0 82 811.0 83 568.0 84 325.0 85 244.0 86 163.0 87 126.5 88 90.0 89 90.0 90 73.0 91 56.0 92 33.0 93 10.0 94 8.5 95 7.0 96 7.0 97 5.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2248047.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.29585194938491 #Duplication Level Percentage of deduplicated Percentage of total 1 74.0220132186249 29.08758072434497 2 13.333609389245005 10.479110810214005 3 5.099723788436196 6.011939729194352 4 2.40071013251032 3.7735179976205506 5 1.2765850641287364 2.5082248840399433 6 0.8149791717861777 1.9215180525805187 7 0.5401067915363373 1.4856769561948449 8 0.37675146525048486 1.1843815840157508 9 0.26727558085185876 0.9452539489356451 >10 1.5967980501661416 12.050327243159664 >50 0.16527988872233812 4.509308506878448 >100 0.08642741275254237 6.4776569765548215 >500 0.00895188132058952 2.3937169218049767 >1k 0.008837113611351194 6.747118479199599 >5k 0.001147677092383272 3.266877675484841 >10k+ 8.033739646682904E-4 7.157789509776989 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 38137 1.696450296635257 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34350 1.5279929645599046 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 30846 1.3721243372580734 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 18702 0.8319221083900825 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13663 0.6077719905322264 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 11631 0.517382421275 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 11384 0.5063951065080046 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9923 0.44140536207650466 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 8691 0.38660223740873745 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8691 0.38660223740873745 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 8115 0.36097999730432684 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 7492 0.33326705358028547 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 7280 0.3238366457640788 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6061 0.2696118008208903 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5912 0.26298382551610355 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5270 0.23442570373306254 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5003 0.22254872785133054 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4539 0.2019085899894442 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 4440 0.1975047674714986 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3930 0.17481840904571835 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3873 0.17228287486871938 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3535 0.15724760202967286 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3481 0.1548455170198844 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3175 0.14123370196441623 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3112 0.1384312694529963 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3030 0.13478365888257676 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3008 0.13380503165636662 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2820 0.1254422171778437 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2796 0.12437462384015993 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2667 0.11863630965010963 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2537 0.11285351240432251 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2532 0.11263109712563839 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2446 0.10880555433227153 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 2441 0.10858313905358741 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2393 0.10644795237821986 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 2303 0.10244447736190568 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.4483055736824004E-5 0.0 3 0.0 0.0 0.0 4.4483055736824004E-5 0.0 4 0.0 0.0 0.0 1.3344916721047203E-4 0.0 5 0.0 0.0 0.0 1.7793222294729602E-4 0.0 6 4.4483055736824004E-5 0.0 0.0 2.2241527868412003E-4 0.0 7 4.4483055736824004E-5 0.0 0.0 2.6689833442094407E-4 0.0 8 4.4483055736824004E-5 0.0 0.0 2.6689833442094407E-4 0.0 9 4.4483055736824004E-5 0.0 0.0 7.562119475260081E-4 0.0 10 4.4483055736824004E-5 0.0 0.0 0.0011120763934206002 0.0 11 4.4483055736824004E-5 0.0 0.0 0.0017348391737361363 0.0 12 4.4483055736824004E-5 0.0 0.0 0.0024465680655253205 0.0 13 4.4483055736824004E-5 0.0 0.0 0.0027134663999462644 0.0 14 8.896611147364801E-5 0.0 0.0 0.0033807122359986244 0.0 15 8.896611147364801E-5 0.0 0.0 0.004804170019576993 0.0 16 8.896611147364801E-5 0.0 0.0 0.006761424471997249 0.0 17 8.896611147364801E-5 0.0 0.0 0.009341441704733042 0.0 18 8.896611147364801E-5 0.0 0.0 0.010409035042416817 0.0 19 8.896611147364801E-5 0.0 0.0 0.01187697588173201 0.0 20 8.896611147364801E-5 0.0 0.0 0.015747001730835698 0.0 21 8.896611147364801E-5 0.0 0.0 0.021485315920885997 0.0 22 8.896611147364801E-5 0.0 0.0 0.03563092764519603 0.0 23 8.896611147364801E-5 0.0 0.0 0.06187593052992219 0.0 24 8.896611147364801E-5 0.0 0.0 0.09550512066696114 0.0 25 8.896611147364801E-5 0.0 0.0 0.10827175766342964 0.0 26 8.896611147364801E-5 0.0 0.0 0.12161667438447683 0.0 27 8.896611147364801E-5 0.0 0.0 0.20315411555007523 0.0 28 8.896611147364801E-5 0.0 0.0 0.2848250058828841 0.0 29 1.3344916721047203E-4 0.0 0.0 0.3838887710087912 0.0 30 1.3344916721047203E-4 0.0 0.0 0.5752103937328712 0.0 31 1.3344916721047203E-4 0.0 0.0 0.828052082540979 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8860 0.0 29.128103 1 TAGCGAG 40 0.0019317587 23.125 28 ATTGGAC 825 0.0 22.648485 3 CGCGATA 50 2.703216E-4 22.2 14 ACGTTTA 140 0.0 21.142857 26 ACGTGCG 70 5.105505E-6 21.142857 9 GTATTGG 810 0.0 21.012346 1 TTGGACC 1400 0.0 19.557144 4 TGGACCC 1435 0.0 18.56446 5 CGCGATC 60 9.240562E-4 18.5 10 TGCGCGA 60 9.240562E-4 18.5 12 TATTGGA 995 0.0 18.407036 2 GGACCCT 1440 0.0 18.371529 6 TCACGTT 145 1.546141E-10 17.86207 24 ACGGTGT 105 4.802314E-7 17.619047 29 GTATCAA 15205 0.0 17.557053 2 AGTATCA 480 0.0 17.34375 1 GACCCTC 1490 0.0 17.258389 7 TTTTTAC 1790 0.0 15.916202 1 CTGCGTG 95 7.064474E-5 15.578948 9 >>END_MODULE