##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088277_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2350161 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.928649569114626 31.0 30.0 33.0 27.0 34.0 2 30.80036091144394 31.0 31.0 34.0 27.0 34.0 3 30.7305563320981 31.0 31.0 34.0 27.0 34.0 4 34.966796317358686 35.0 35.0 37.0 32.0 37.0 5 34.918814072737995 35.0 35.0 37.0 32.0 37.0 6 35.036639617456 36.0 35.0 37.0 32.0 37.0 7 34.61488000183817 35.0 35.0 37.0 30.0 37.0 8 34.86780948198868 35.0 35.0 37.0 32.0 37.0 9 36.303712809462844 38.0 35.0 39.0 32.0 39.0 10 36.239124893996625 38.0 35.0 39.0 32.0 39.0 11 36.32804858901156 38.0 35.0 39.0 32.0 39.0 12 36.07276310005995 38.0 35.0 39.0 31.0 39.0 13 36.23201346631146 38.0 35.0 39.0 32.0 39.0 14 37.14096183197662 39.0 36.0 40.0 31.0 41.0 15 37.18468947446579 39.0 36.0 40.0 32.0 41.0 16 37.11856294100702 39.0 36.0 40.0 31.0 41.0 17 37.214455094778614 39.0 36.0 40.0 32.0 41.0 18 37.22344469166155 39.0 36.0 40.0 32.0 41.0 19 37.31911600949893 39.0 36.0 40.0 32.0 41.0 20 37.27645382592937 39.0 36.0 40.0 31.0 41.0 21 37.214202346137135 39.0 36.0 40.0 31.0 41.0 22 37.13006725922182 39.0 36.0 40.0 31.0 41.0 23 37.003908668384845 39.0 36.0 40.0 31.0 41.0 24 36.93185956196192 39.0 35.0 40.0 31.0 41.0 25 36.85322707678325 39.0 35.0 40.0 31.0 41.0 26 36.60021675110769 38.0 35.0 40.0 30.0 41.0 27 36.45788139621073 38.0 35.0 40.0 30.0 41.0 28 36.304736143608885 38.0 35.0 40.0 30.0 41.0 29 36.146357632519646 38.0 35.0 40.0 30.0 41.0 30 35.97821808803737 38.0 34.0 40.0 29.0 41.0 31 35.723673824899656 38.0 34.0 40.0 29.0 41.0 32 35.459142160898764 38.0 34.0 40.0 27.0 41.0 33 35.58604878559384 38.0 34.0 40.0 28.0 41.0 34 35.58097296312891 38.0 34.0 40.0 28.0 41.0 35 35.494723552982116 38.0 34.0 40.0 27.0 41.0 36 35.40529308417594 38.0 34.0 40.0 27.0 41.0 37 35.24648694280945 38.0 34.0 40.0 26.0 41.0 38 35.11788979563528 38.0 34.0 40.0 26.0 41.0 39 35.07856993627245 38.0 34.0 40.0 25.0 41.0 40 34.922885708681235 38.0 33.0 40.0 25.0 41.0 41 34.75768723929978 38.0 33.0 40.0 24.0 41.0 42 34.55592404094868 38.0 33.0 40.0 23.0 41.0 43 34.21507760532151 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 9 1.0 10 0.0 11 1.0 12 0.0 13 1.0 14 6.0 15 6.0 16 22.0 17 61.0 18 174.0 19 410.0 20 840.0 21 1712.0 22 3157.0 23 5396.0 24 9370.0 25 14682.0 26 22086.0 27 32441.0 28 45114.0 29 60899.0 30 79888.0 31 97760.0 32 121028.0 33 146943.0 34 177648.0 35 213172.0 36 259600.0 37 324199.0 38 375051.0 39 358493.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.52124982075696 25.232441522091463 13.479161640415274 21.7671470167363 2 17.768782649358915 23.17449740677341 36.353764699524845 22.702955244342835 3 19.430413490820417 27.333191215410345 32.18715653948814 21.04923875428109 4 12.726362151358991 16.082685399000322 35.97447153620539 35.21648091343529 5 10.862106893953223 40.86409399185843 35.05125819039632 13.222540923792028 6 31.03038472683361 36.64587234661795 15.711349137356972 16.612393789191465 7 24.063202478468497 35.53331027108356 21.982579065859742 18.420908184588207 8 27.52219954292493 33.89257161530635 20.428047269952994 18.157181571815716 9 25.085345216774513 13.685870882888448 23.93623245386167 37.29255144647537 10 16.077494265286507 27.925448511825362 34.11396070311778 21.883096519770348 11 30.96498495209477 22.03389469912912 25.475956753601135 21.525163595174966 12 19.834896417734786 27.770310204279617 32.18673103672472 20.208062341260874 13 30.675132469647824 21.141360102563187 29.12383449474313 19.059672933045864 14 20.58607899629004 22.91000488902675 28.86329915269635 27.640616961986858 15 22.779758493141532 29.156470556698032 27.3352336286748 20.728537321485636 16 21.314795028936313 28.77287981546796 27.63189415533659 22.28043100025913 17 18.985763103038472 27.411483723881048 28.376906943822146 25.225846229258337 18 20.093006394030024 26.734593927820267 32.746394821461166 20.426004856688543 19 19.379991413354233 25.217208523160757 34.12549182800667 21.277308235478333 20 23.930786018489798 24.099200012254478 32.82604893877483 19.143965030480892 21 23.12322432378037 25.051134794594926 31.620727260813197 20.20491362081151 22 21.562182335593178 24.621249352703924 32.59308617579817 21.22348213590473 23 20.520891972932915 26.660726648089216 33.54702082112672 19.271360557851143 24 19.207237291402592 25.768319702352304 32.114735969152754 22.909707037092353 25 20.417026748380216 26.77582514559641 33.05994780783104 19.747200298192336 26 21.894712745211926 25.623563662234204 31.66612840567093 20.81559518688294 27 20.49063872645321 27.22707082621148 31.27955914509687 21.00273130223844 28 20.1881913622088 26.52558697042458 31.51294741083696 21.77327425652966 29 19.286253154571114 26.513375041114205 32.50262428829344 21.69774751602124 30 18.630298094470973 26.88483895358658 34.32526537543598 20.15959757650646 31 20.120536422823797 26.219012229374922 33.24929653755636 20.411154810244916 32 21.23441755692482 26.536139438957584 31.11501722647938 21.114425777638214 33 22.14367441209347 26.373554833051866 30.67721743318862 20.805553321666046 34 20.277121439765192 29.13251475111705 30.778997694200527 19.811366114917234 35 19.07316137064652 30.015518085782205 30.97311205487624 19.938208488695032 36 20.05360483813662 26.43142320887803 32.98310200875599 20.531869944229353 37 20.220827424163705 26.741870025074878 32.018189392131006 21.01911315863041 38 20.493532145244515 26.341471924689415 32.57355559895684 20.591440331109233 39 21.435339961815384 25.80784890907474 32.49262497335289 20.26418615575699 40 19.644271179719176 26.62379300822369 31.703657749405256 22.02827806265188 41 20.772576857500404 26.020387539406876 31.530563225242865 21.67647237784986 42 18.292789302520127 27.79945714357442 31.916494231671788 21.99125932223367 43 18.976572243348436 27.42416370623119 31.55043420429494 22.048829846125436 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 168.0 1 254.5 2 341.0 3 1033.0 4 1725.0 5 1725.0 6 2968.0 7 4211.0 8 4594.0 9 4977.0 10 7754.0 11 10531.0 12 10531.0 13 18900.5 14 27270.0 15 44926.5 16 62583.0 17 60769.5 18 58956.0 19 58956.0 20 63594.5 21 68233.0 22 56567.5 23 44902.0 24 49198.0 25 53494.0 26 53494.0 27 58865.5 28 64237.0 29 67037.0 30 69837.0 31 75104.0 32 80371.0 33 80371.0 34 86388.5 35 92406.0 36 99927.0 37 107448.0 38 110521.0 39 113594.0 40 113594.0 41 119338.5 42 125083.0 43 140865.0 44 156647.0 45 194380.0 46 232113.0 47 232113.0 48 233936.5 49 235760.0 50 213457.5 51 191155.0 52 177532.0 53 163909.0 54 163909.0 55 141592.0 56 119275.0 57 98043.0 58 76811.0 59 66631.0 60 56451.0 61 56451.0 62 48973.5 63 41496.0 64 35999.5 65 30503.0 66 25362.0 67 20221.0 68 20221.0 69 17170.0 70 14119.0 71 11612.0 72 9105.0 73 7302.5 74 5500.0 75 5500.0 76 4249.5 77 2999.0 78 2351.5 79 1704.0 80 1335.0 81 966.0 82 966.0 83 696.5 84 427.0 85 360.0 86 293.0 87 241.0 88 189.0 89 189.0 90 146.5 91 104.0 92 68.0 93 32.0 94 22.5 95 13.0 96 13.0 97 7.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2350161.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.94081588709335 #Duplication Level Percentage of deduplicated Percentage of total 1 74.88570526692997 32.905389877093064 2 13.435373039336673 11.807225061918212 3 4.927381222505483 6.495394533109031 4 2.2758966572957435 4.000190239851338 5 1.2579325853160017 2.7637292064872887 6 0.6816233023820103 1.7970650420592285 7 0.4380630554796837 1.3474193647439237 8 0.31235596969922386 1.0980140924630484 9 0.22034974971021326 0.8714113004505223 >10 1.3294501210454253 11.247916938996894 >50 0.13778239652862578 4.201555347804805 >100 0.08444192628039111 7.028933400130229 >500 0.005987965157743878 1.855097726818145 >1k 0.006380618610710689 5.3827510120231095 >5k 7.853069059336231E-4 2.505166966049828 >10k+ 4.908168162085144E-4 4.692739890001397 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 30016 1.2771890947045756 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27807 1.1831955342633973 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25137 1.0695862964282021 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15613 0.6643374645396635 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10222 0.434948924775792 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8479 0.36078379311034436 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8442 0.3592094328856619 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8270 0.3518907853547055 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8219 0.3497207212612242 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6413 0.27287492218618215 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6364 0.27078995864538646 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5955 0.2533868956211936 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5937 0.25262099064702376 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4814 0.20483703031409337 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4790 0.20381582368186688 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4450 0.1893487297253252 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4110 0.1748816357687835 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3632 0.1545426036769396 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3531 0.15024502576631982 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3447 0.14667080255352719 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3121 0.13279941246578425 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2897 0.12326815056500383 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2817 0.11986412845758226 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2683 0.11416239142765112 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2540 0.10807770191063507 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2383 0.10139730852482022 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2356 0.10024845106356543 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 4.255027634276971E-5 0.0 3 0.0 0.0 0.0 4.255027634276971E-5 0.0 4 0.0 0.0 0.0 8.510055268553942E-5 0.0 5 0.0 0.0 0.0 8.510055268553942E-5 0.0 6 0.0 0.0 0.0 8.510055268553942E-5 0.0 7 0.0 0.0 0.0 1.7020110537107884E-4 0.0 8 0.0 0.0 0.0 1.7020110537107884E-4 0.0 9 0.0 0.0 0.0 2.5530165805661824E-4 0.0 10 0.0 0.0 0.0 4.6805303977046677E-4 0.0 11 0.0 0.0 0.0 8.510055268553941E-4 0.0 12 0.0 0.0 0.0 0.0010637569085692427 0.0 13 0.0 0.0 0.0 0.0012339580139403216 0.0 14 0.0 0.0 0.0 0.001319058566625861 0.0 15 0.0 0.0 0.0 0.0019573127117674064 0.0 16 0.0 0.0 0.0 0.0031912707257077282 0.0 17 0.0 0.0 0.0 0.0049358320557612865 0.0 18 0.0 0.0 0.0 0.005616636477245601 0.0 19 0.0 0.0 0.0 0.006978245320214232 0.0 20 0.0 0.0 0.0 0.008297303886840093 0.0 21 0.0 0.0 0.0 0.011318373507176743 0.0 22 0.0 0.0 0.0 0.018637021038133132 0.0 23 0.0 0.0 0.0 0.03361471831078807 0.0 24 0.0 0.0 0.0 0.053528247639204295 0.0 25 0.0 0.0 0.0 0.06135749848627392 0.0 26 0.0 0.0 0.0 0.07139936370316757 0.0 27 0.0 0.0 0.0 0.13492692628292274 0.0 28 0.0 0.0 0.0 0.197518382783137 0.0 29 0.0 0.0 0.0 0.27240686914641166 0.0 30 0.0 0.0 0.0 0.4108654683657843 0.0 31 0.0 0.0 0.0 0.5997886953276818 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6960 0.0 29.105604 1 GTATTGG 835 0.0 22.598803 1 ATTGGAC 885 0.0 20.903954 3 CGATCGT 75 9.272531E-6 19.733334 26 ACGCATA 115 3.0559022E-9 19.304348 7 CGCCGGA 175 0.0 19.028572 14 TATTGGA 1080 0.0 19.01389 2 TATACTG 320 0.0 18.5 5 CCTATCG 60 9.2407304E-4 18.5 13 TTGGACC 1400 0.0 17.839287 4 TCGACGG 75 2.068425E-4 17.266666 19 GTATCAA 12185 0.0 17.232254 2 ACGTTTA 280 0.0 17.178572 26 CGTCTGT 580 0.0 16.905172 34 GGACCCT 1490 0.0 16.761745 6 TGCGACG 100 5.8830483E-6 16.650002 22 CGCCGTT 90 4.449139E-5 16.444445 25 CTGTGCG 165 9.749783E-10 15.69697 9 ACAACGC 320 0.0 15.609375 3 GACCCTC 1550 0.0 15.277418 7 >>END_MODULE