##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088272_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2882611 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.952019193710147 31.0 30.0 33.0 27.0 34.0 2 30.77407912479346 31.0 31.0 34.0 27.0 34.0 3 30.777646376843773 31.0 31.0 34.0 27.0 34.0 4 34.9543830228914 35.0 35.0 37.0 32.0 37.0 5 34.84779007642724 35.0 35.0 37.0 32.0 37.0 6 34.95371904152173 35.0 35.0 37.0 32.0 37.0 7 34.58258502447954 35.0 35.0 37.0 30.0 37.0 8 34.797169996229115 35.0 35.0 37.0 32.0 37.0 9 36.24099297477183 38.0 35.0 39.0 32.0 39.0 10 36.14894413432822 38.0 35.0 39.0 31.0 39.0 11 36.233927852214535 38.0 35.0 39.0 32.0 39.0 12 35.972584923876305 38.0 35.0 39.0 30.0 39.0 13 36.14502789311496 38.0 35.0 39.0 31.0 39.0 14 37.064179315211106 39.0 36.0 40.0 31.0 41.0 15 37.10222815357327 39.0 36.0 40.0 31.0 41.0 16 37.02618702280675 39.0 36.0 40.0 31.0 41.0 17 37.096285971294776 39.0 36.0 40.0 31.0 41.0 18 37.090121074262186 39.0 36.0 40.0 31.0 41.0 19 37.16622811749487 39.0 36.0 40.0 31.0 41.0 20 37.12406321907465 39.0 36.0 40.0 31.0 41.0 21 37.0577327291126 39.0 36.0 40.0 31.0 41.0 22 36.97140994744001 39.0 36.0 40.0 31.0 41.0 23 36.85482883399806 39.0 35.0 40.0 31.0 41.0 24 36.78475833194281 39.0 35.0 40.0 30.0 41.0 25 36.69227412231481 38.0 35.0 40.0 30.0 41.0 26 36.43285167509595 38.0 35.0 40.0 30.0 41.0 27 36.289674534649315 38.0 35.0 40.0 30.0 41.0 28 36.13142911062228 38.0 35.0 40.0 30.0 41.0 29 35.96724358576304 38.0 34.0 40.0 29.0 41.0 30 35.80775449757182 38.0 34.0 40.0 29.0 41.0 31 35.56585019622835 38.0 34.0 40.0 27.0 41.0 32 35.35299560016943 38.0 34.0 40.0 27.0 41.0 33 35.49081093494752 38.0 34.0 40.0 27.0 41.0 34 35.49301345204053 38.0 34.0 40.0 27.0 41.0 35 35.40657168102113 38.0 34.0 40.0 27.0 41.0 36 35.32354382884128 38.0 34.0 40.0 27.0 41.0 37 35.17474539575406 38.0 34.0 40.0 26.0 41.0 38 35.05326039482955 38.0 33.0 40.0 25.0 41.0 39 35.03492770963547 38.0 33.0 40.0 25.0 41.0 40 34.90056341282261 38.0 33.0 40.0 25.0 41.0 41 34.75038671537713 38.0 33.0 40.0 24.0 41.0 42 34.58275570307614 38.0 33.0 40.0 23.0 41.0 43 34.24752906306123 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 4.0 14 3.0 15 10.0 16 27.0 17 106.0 18 238.0 19 566.0 20 1221.0 21 2365.0 22 4373.0 23 7345.0 24 12407.0 25 19685.0 26 29349.0 27 42662.0 28 58740.0 29 78412.0 30 100442.0 31 124119.0 32 150091.0 33 181272.0 34 218288.0 35 259875.0 36 315301.0 37 391189.0 38 464114.0 39 420407.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.66667718953407 24.81587005669513 13.236229238006795 22.281223515764008 2 18.167626502500685 23.18894224715024 35.639147980771604 23.004283269577478 3 19.910248035548328 26.688131003454853 31.64513005743751 21.756490903559307 4 13.385573010024594 16.135059499877023 35.70408910532847 34.77527838476992 5 11.534612197067172 40.34599188027798 34.80868559788331 13.310710324771534 6 31.83998812187978 36.495871277810295 15.481242526306879 16.18289807400305 7 24.736844478842272 34.70572338758161 21.935391213035683 18.622040920540442 8 27.429403412392446 33.994701331535886 20.271448350124246 18.304446905947422 9 25.32703857717881 13.63139181804274 23.118832197615287 37.92273740716316 10 16.05502788964588 27.803994364831052 34.171346740854034 21.96963100466903 11 32.00594877352511 21.77886645128323 24.799946992500896 21.415237782690763 12 20.069582749805644 27.169881749566628 31.962966907432182 20.797568593195546 13 30.754756711883775 20.991732842204517 28.448930500854953 19.804579945056755 14 20.865180907170615 22.352686505393894 28.223197649630837 28.558934937804647 15 23.07356074059247 29.0203915824924 26.444046734019956 21.462000942895173 16 21.8707623054238 28.428775162517596 26.94144301815264 22.75901951390597 17 19.749768525826063 27.08870534387054 28.043395380091173 25.11813075021222 18 20.777031656369868 26.55179627081143 31.76852513224989 20.90264694056881 19 20.220765132721688 25.171138249316332 32.88411096745277 21.72398565050921 20 24.059576543626594 24.336755809229896 31.738101325499695 19.865566321643815 21 23.450163757787646 24.96878697819442 30.625741732061663 20.955307531956272 22 22.018579683488337 24.700349787050698 31.513166362023874 21.76790416743709 23 21.209001145142373 26.433361976347136 32.30709936234892 20.05053751616156 24 20.27675603818899 25.61396594961998 30.928071807122087 23.181206205068946 25 21.130253093462837 26.45844340426093 31.784101288727477 20.62720221354876 26 22.366805649461547 25.606507433712007 30.60274175044777 21.423945166378676 27 21.146280229972064 26.834803586054452 30.40139651170415 21.617519672269342 28 20.950589587009834 26.37966066180973 30.562396383001385 22.10735336817906 29 20.21375759684536 26.244956395434553 31.36611218093596 22.17517382678412 30 19.698703709935195 26.565603197934095 32.8565318039791 20.87916128815161 31 20.8323981279472 26.002606664582906 32.05860936491257 21.10638584255732 32 21.700499998092006 26.255606462335706 30.2550708368212 21.78882270275108 33 22.51264565354118 26.105395421026284 29.982644206936005 21.39931471849653 34 20.997699654930894 28.415141689253247 29.987292770339113 20.599865885476742 35 20.006584308462017 29.310545196698413 30.090116217554154 20.59275427728542 36 20.853004446316202 26.038095323996195 31.92341942773409 21.185480801953506 37 20.9028550851988 26.358395218779084 31.110822792253273 21.62792690376884 38 21.111346622905415 25.9136248352622 31.668927926799697 21.30610061503269 39 21.755901160441002 25.46760558396537 31.755203875930537 21.02128937966309 40 20.366605136801326 26.11781471728235 31.091118433947557 22.424461711968767 41 21.184509460346888 25.603975007380463 30.87738858971953 22.334126942553123 42 19.067401047175633 27.117013013549172 31.306617507530497 22.50896843174469 43 19.63601748553655 26.873136888744263 30.920717363529103 22.570128262190075 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 236.0 1 345.5 2 455.0 3 1208.0 4 1961.0 5 1961.0 6 3499.5 7 5038.0 8 5487.0 9 5936.0 10 8856.0 11 11776.0 12 11776.0 13 21123.0 14 30470.0 15 49286.5 16 68103.0 17 66004.0 18 63905.0 19 63905.0 20 68943.5 21 73982.0 22 62098.0 23 50214.0 24 55565.5 25 60917.0 26 60917.0 27 67606.0 28 74295.0 29 78838.5 30 83382.0 31 89465.5 32 95549.0 33 95549.0 34 103063.0 35 110577.0 36 119686.0 37 128795.0 38 134207.5 39 139620.0 40 139620.0 41 145753.0 42 151886.0 43 169623.5 44 187361.0 45 227531.0 46 267701.0 47 267701.0 48 272552.0 49 277403.0 50 253823.0 51 230243.0 52 217636.0 53 205029.0 54 205029.0 55 179014.0 56 152999.0 57 129906.0 58 106813.0 59 94584.0 60 82355.0 61 82355.0 62 72936.5 63 63518.0 64 55857.5 65 48197.0 66 41685.5 67 35174.0 68 35174.0 69 30107.0 70 25040.0 71 21519.5 72 17999.0 73 14659.5 74 11320.0 75 11320.0 76 8881.5 77 6443.0 78 5106.0 79 3769.0 80 2906.5 81 2044.0 82 2044.0 83 1554.0 84 1064.0 85 794.0 86 524.0 87 407.0 88 290.0 89 290.0 90 231.5 91 173.0 92 103.0 93 33.0 94 24.5 95 16.0 96 16.0 97 9.5 98 3.0 99 3.0 100 3.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2882611.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.451921872169784 #Duplication Level Percentage of deduplicated Percentage of total 1 73.58427317109124 32.70962362021748 2 13.922521881789415 12.377657099057547 3 5.17290289321715 6.898364257848294 4 2.4549023552726084 4.365005108015343 5 1.3114056183612657 2.9147250045059745 6 0.7644793542544112 2.038954591692234 7 0.5311741976087256 1.6528199752830885 8 0.3554917985051096 1.2641834922677007 9 0.2539735228361539 1.01606500752412 >10 1.4271628625521173 11.857604459521905 >50 0.13254496192383683 4.104679826192975 >100 0.07781990925306077 6.452469675176513 >500 0.004728113889606339 1.4376234736464322 >1k 0.0055949347693592544 4.7941332776974175 >5k 6.304151852799159E-4 2.104224548264394 >10k+ 3.940094907999475E-4 4.011866583088697 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31747 1.1013279280485642 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29982 1.0400987160598498 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26157 0.907406514441248 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 15461 0.5363540207124721 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11183 0.3879468995296278 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9639 0.3343843480788771 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8691 0.30149749654046276 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8515 0.2953919207274239 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8448 0.29306763902586924 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6747 0.23405863642371447 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6392 0.2217434124826416 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5859 0.20325323118519978 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5780 0.2005126602236653 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4997 0.17334978600997497 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4806 0.16672384862196113 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4602 0.15964693120230236 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4045 0.1403241713849007 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3931 0.1363694234150914 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3609 0.12519899493896333 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3539 0.12277064092241374 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3437 0.11923218221258436 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3018 0.10469674888495188 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2980 0.1033784995616821 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 3.469077166499399E-5 0.0 3.469077166499399E-5 0.0 5 0.0 6.938154332998798E-5 0.0 6.938154332998798E-5 0.0 6 3.469077166499399E-5 6.938154332998798E-5 0.0 6.938154332998798E-5 0.0 7 3.469077166499399E-5 6.938154332998798E-5 0.0 6.938154332998798E-5 0.0 8 6.938154332998798E-5 6.938154332998798E-5 0.0 1.0407231499498198E-4 0.0 9 6.938154332998798E-5 6.938154332998798E-5 0.0 1.7345385832496997E-4 0.0 10 6.938154332998798E-5 6.938154332998798E-5 0.0 2.0814462998996396E-4 0.0 11 6.938154332998798E-5 6.938154332998798E-5 0.0 4.509800316449219E-4 0.0 12 6.938154332998798E-5 6.938154332998798E-5 0.0 5.897431183048979E-4 0.0 13 6.938154332998798E-5 6.938154332998798E-5 0.0 6.591246616348858E-4 0.0 14 6.938154332998798E-5 6.938154332998798E-5 0.0 8.325785199598558E-4 0.0 15 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.0012488677799397838 0.0 16 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.0017692293549146938 0.0 17 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.0029140248198594953 0.0 18 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.0034343863948344054 0.0 19 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.004336346458124249 0.0 20 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.005203615749749099 0.0 21 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.007631969766298679 0.0 22 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.013494710177682664 0.0 23 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.022930600070561028 0.0 24 1.0407231499498198E-4 6.938154332998798E-5 0.0 0.03750072416985851 0.0 25 1.3876308665997596E-4 6.938154332998798E-5 0.0 0.04412666155787236 0.0 26 1.3876308665997596E-4 6.938154332998798E-5 0.0 0.05293811756078083 0.0 27 1.3876308665997596E-4 6.938154332998798E-5 0.0 0.11819145906263454 0.0 28 1.3876308665997596E-4 6.938154332998798E-5 0.0 0.18039201265796875 0.0 29 1.3876308665997596E-4 6.938154332998798E-5 0.0 0.25251412694949127 0.0 30 1.3876308665997596E-4 6.938154332998798E-5 0.0 0.38784282721463287 0.0 31 1.3876308665997596E-4 6.938154332998798E-5 0.0 0.5739241264256606 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7960 0.0 28.563442 1 GTATTGG 1080 0.0 20.898148 1 ATTGGAC 1100 0.0 20.518183 3 GGTCCGT 60 9.241425E-4 18.5 6 GTATCAA 13085 0.0 17.998089 2 TATTGGA 1320 0.0 17.65909 2 TTGGACC 1780 0.0 17.564608 4 GAACCGT 95 3.6102047E-6 17.526316 6 GGACCCT 1760 0.0 16.923296 6 TGGACCC 1885 0.0 15.801062 5 ATAACGC 150 8.11433E-8 14.8 3 CGGTATA 210 1.364242E-10 14.095238 26 ACGCCTA 145 8.922616E-7 14.034483 6 ACGGACC 145 8.922616E-7 14.034483 8 TTGGACG 80 0.0063016606 13.875 4 GTCTAAC 230 4.0017767E-11 13.673913 1 GTACGAC 95 0.0012458705 13.631579 11 CGTCTGT 790 0.0 13.58228 34 TCTAACG 150 1.3073404E-6 13.566667 2 TATACAG 410 0.0 13.536586 5 >>END_MODULE