##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088270_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2176783 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.096069750636605 31.0 30.0 33.0 27.0 34.0 2 30.87534586589476 31.0 31.0 34.0 27.0 34.0 3 30.833943025097128 31.0 31.0 34.0 27.0 34.0 4 35.00622386338004 35.0 35.0 37.0 32.0 37.0 5 34.908886646027646 35.0 35.0 37.0 32.0 37.0 6 35.01191437088585 36.0 35.0 37.0 32.0 37.0 7 34.639529985304 35.0 35.0 37.0 30.0 37.0 8 34.85229487734882 35.0 35.0 37.0 32.0 37.0 9 36.29644066496293 38.0 35.0 39.0 32.0 39.0 10 36.213047878451825 38.0 35.0 39.0 32.0 39.0 11 36.30173747222392 38.0 35.0 39.0 32.0 39.0 12 36.03905809628245 38.0 35.0 39.0 30.0 39.0 13 36.20942785753105 38.0 35.0 39.0 32.0 39.0 14 37.14142061932678 39.0 36.0 40.0 31.0 41.0 15 37.179392249939475 39.0 36.0 40.0 32.0 41.0 16 37.10712689321811 39.0 36.0 40.0 31.0 41.0 17 37.17698364972531 39.0 36.0 40.0 31.0 41.0 18 37.17371828060032 39.0 36.0 40.0 31.0 41.0 19 37.25523031004928 39.0 36.0 40.0 31.0 41.0 20 37.20917335352215 39.0 36.0 40.0 31.0 41.0 21 37.13428394102674 39.0 36.0 40.0 31.0 41.0 22 37.05049653548379 39.0 36.0 40.0 31.0 41.0 23 36.93254908734587 39.0 36.0 40.0 31.0 41.0 24 36.866920588777106 39.0 35.0 40.0 31.0 41.0 25 36.7809845997511 39.0 35.0 40.0 30.0 41.0 26 36.5273428724866 38.0 35.0 40.0 30.0 41.0 27 36.39042614720898 38.0 35.0 40.0 30.0 41.0 28 36.251808747128216 38.0 35.0 40.0 30.0 41.0 29 36.08643672796048 38.0 35.0 40.0 29.0 41.0 30 35.94057698907057 38.0 34.0 40.0 29.0 41.0 31 35.71369769058285 38.0 34.0 40.0 28.0 41.0 32 35.475354686250306 38.0 34.0 40.0 27.0 41.0 33 35.64156693616222 38.0 34.0 40.0 28.0 41.0 34 35.64787027462085 38.0 34.0 40.0 28.0 41.0 35 35.57116763591042 38.0 34.0 40.0 27.0 41.0 36 35.49741246601062 38.0 34.0 40.0 27.0 41.0 37 35.364019748408545 38.0 34.0 40.0 27.0 41.0 38 35.259381389876715 38.0 34.0 40.0 26.0 41.0 39 35.26130257356843 38.0 34.0 40.0 26.0 41.0 40 35.150990705090955 38.0 34.0 40.0 25.0 41.0 41 35.011075058928704 38.0 33.0 40.0 25.0 41.0 42 34.85265871701497 38.0 33.0 40.0 24.0 41.0 43 34.528941102535256 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 4.0 15 7.0 16 19.0 17 55.0 18 154.0 19 367.0 20 780.0 21 1582.0 22 2894.0 23 5083.0 24 8456.0 25 13344.0 26 20467.0 27 29972.0 28 41660.0 29 56217.0 30 72643.0 31 90316.0 32 111138.0 33 134688.0 34 162897.0 35 195135.0 36 237486.0 37 297658.0 38 357354.0 39 336405.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.95694563950563 24.38791556163384 12.966060466293609 22.68907833256691 2 17.969315269367687 22.74797258155728 36.12215824912267 23.16055389995236 3 19.533504258348213 26.847738153045114 31.596213311110937 22.022544277495737 4 13.100800585083586 15.964430078698705 36.08209913436479 34.852670201852916 5 11.556641153481996 40.060217302321824 35.082964172358935 13.300177371837249 6 31.721489923432884 36.687855427022356 15.619884940299517 15.97076970924525 7 25.02270552462051 34.398743466849936 22.105694504229405 18.472856504300154 8 27.2862752051996 34.1774076699423 20.229852952728866 18.30646417212924 9 25.320714099659913 13.68684889582471 22.972524133089976 38.019912871425404 10 16.031547471658865 27.404339339291056 34.39520613676237 22.16890705228771 11 31.919258832874014 21.93732677993167 24.82672824989905 21.316686137295264 12 20.042787912254 26.911134458510567 32.12460773535993 20.921469893875503 13 30.712202364682195 20.923491225354113 28.270387999171255 20.09391841079244 14 20.947241870227764 22.145891437042646 28.047536203654662 28.859330489074935 15 23.182145395292043 28.87715495756812 26.26297614415401 21.67772350298583 16 22.07601768297529 28.48855398080562 26.685434423183203 22.749993913035887 17 19.814193697764086 27.161595804450876 27.80355230631625 25.220658191468786 18 20.897581430946495 26.63683058899302 31.337574760552613 21.12801321950787 19 20.438509488543417 24.9888941617056 32.4811889839272 22.091407365823788 20 24.16566097769047 24.4095989356771 31.35080529386714 20.07393479276529 21 23.599825981735435 25.111644109679283 30.26369647319002 21.02483343539526 22 22.235702869785367 24.638698483036663 31.225758378304132 21.899840268873838 23 21.491577249546694 26.378605492600776 31.972915995760715 20.15690126209181 24 20.367625068736757 25.515818526697426 30.63814812960226 23.47840827496356 25 21.431442638058087 26.397991899054706 31.401522338239502 20.769043124647702 26 22.60928167851366 25.576688167814616 30.302515225449667 21.51151492822206 27 21.40672726679692 26.872177888195566 30.04387667489134 21.677218170116173 28 21.262983035056777 26.17596701187027 30.26043477921318 22.30061517385977 29 20.428632527909304 26.128787297585475 31.174995394579984 22.26758477992524 30 19.940572854528906 26.473332435984666 32.45054743628557 21.135547273200867 31 21.23468439435626 25.93983874368736 31.61380808284519 21.211668779111193 32 21.94876567852652 26.106690469376137 29.98943854302427 21.955105309073065 33 22.701206321438562 26.082250734225692 29.599505325059962 21.617037619275784 34 21.334005272918798 28.165232822931824 29.729789326726642 20.77097257742274 35 20.22231889903587 29.196295634429337 29.779403826656125 20.801981639878665 36 21.161319249553127 26.144682313303626 31.476357542299805 21.217640894843445 37 21.17726020462306 26.366615321784487 30.79186120068009 21.664263272912365 38 21.313608200725568 26.053768336118022 31.26287737454767 21.36974608860874 39 22.060811757533937 25.542095835919337 31.325998043902402 21.071094362644324 40 20.720117714995016 26.11555676427095 30.55688141629184 22.607444104442198 41 21.607849748918472 25.79692142027937 30.37404279618134 22.221186034620814 42 19.448194882080575 27.272217763552913 30.825764442298563 22.45382291206795 43 20.052848630295255 26.949907271418418 30.43367207480029 22.563572023486035 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 106.0 1 182.5 2 259.0 3 758.5 4 1258.0 5 1258.0 6 2155.5 7 3053.0 8 3333.5 9 3614.0 10 5567.5 11 7521.0 12 7521.0 13 13922.0 14 20323.0 15 32617.0 16 44911.0 17 44384.5 18 43858.0 19 43858.0 20 47665.5 21 51473.0 22 43455.5 23 35438.0 24 39503.0 25 43568.0 26 43568.0 27 48710.5 28 53853.0 29 58120.0 30 62387.0 31 67761.0 32 73135.0 33 73135.0 34 79851.5 35 86568.0 36 94193.0 37 101818.0 38 105569.5 39 109321.0 40 109321.0 41 115125.0 42 120929.0 43 133597.5 44 146266.0 45 175285.5 46 204305.0 47 204305.0 48 206554.5 49 208804.0 50 192553.0 51 176302.0 52 166185.0 53 156068.0 54 156068.0 55 137120.5 56 118173.0 57 99678.5 58 81184.0 59 72213.5 60 63243.0 61 63243.0 62 56064.0 63 48885.0 64 43046.5 65 37208.0 66 31762.5 67 26317.0 68 26317.0 69 22219.0 70 18121.0 71 15028.0 72 11935.0 73 9605.0 74 7275.0 75 7275.0 76 5747.0 77 4219.0 78 3359.5 79 2500.0 80 1885.5 81 1271.0 82 1271.0 83 947.5 84 624.0 85 480.0 86 336.0 87 278.0 88 220.0 89 220.0 90 162.5 91 105.0 92 64.0 93 23.0 94 13.5 95 4.0 96 4.0 97 2.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2176783.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.76743387520364 #Duplication Level Percentage of deduplicated Percentage of total 1 76.52790165291783 38.08597285119676 2 13.207160345697044 13.145729583673788 3 4.632137591356728 6.915888038360732 4 1.9667094050923304 3.9151232107869456 5 0.9578572398209128 2.3835048422336182 6 0.5842259508934958 1.7445255827562016 7 0.37184890437534174 1.295417603204672 8 0.2496913211902548 0.9941197053238591 9 0.19971616359429012 0.8945424868939369 >10 1.1297485717986226 10.834891502419158 >50 0.10745273753985238 3.6616842978183537 >100 0.055841466124167204 5.136146374666599 >500 0.004107505599542274 1.4423225712349976 >1k 0.004760972399469452 4.530319167861718 >5k 4.6676199994798547E-4 1.61115491859747 >10k+ 3.7340959995838836E-4 3.408657262971187 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 21941 1.0079553175488782 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 19979 0.9178223093436508 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 18658 0.857136425633607 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12791 0.5876102487018687 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 7789 0.35782161106550353 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6944 0.31900285880586166 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 6880 0.3160627402915219 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 6585 0.3025106315144872 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 6481 0.29773293892868513 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4922 0.22611348949344054 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4895 0.22487312699520345 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 4641 0.21320453164141764 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 4356 0.20011181638224848 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3855 0.17709620113718272 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3786 0.17392638586391018 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3721 0.1709403279977839 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2807 0.12895176046486947 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2660 0.12219867575224541 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2598 0.11935043594147879 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2515 0.11553746974319443 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2379 0.10928971790022249 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2352 0.10804935540198542 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2319 0.10653335679302897 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.593935178655842E-5 0.0 2 0.0 0.0 0.0 4.593935178655842E-5 0.0 3 0.0 0.0 0.0 4.593935178655842E-5 0.0 4 0.0 0.0 0.0 9.187870357311684E-5 0.0 5 4.593935178655842E-5 0.0 0.0 9.187870357311684E-5 0.0 6 4.593935178655842E-5 0.0 0.0 9.187870357311684E-5 0.0 7 9.187870357311684E-5 0.0 0.0 9.187870357311684E-5 0.0 8 9.187870357311684E-5 0.0 0.0 9.187870357311684E-5 0.0 9 9.187870357311684E-5 0.0 0.0 9.187870357311684E-5 0.0 10 9.187870357311684E-5 0.0 0.0 1.837574071462337E-4 0.0 11 9.187870357311684E-5 0.0 0.0 4.5939351786558423E-4 0.0 12 9.187870357311684E-5 0.0 0.0 7.350296285849348E-4 0.0 13 9.187870357311684E-5 0.0 0.0 7.809689803714931E-4 0.0 14 9.187870357311684E-5 0.0 0.0 8.269083321580516E-4 0.0 15 9.187870357311684E-5 0.0 0.0 0.001515998608956428 0.0 16 9.187870357311684E-5 0.0 0.0 0.002388846292901038 0.0 17 9.187870357311684E-5 0.0 0.0 0.0037670268464977904 0.0 18 9.187870357311684E-5 0.0 0.0 0.0042723597161499335 0.0 19 9.187870357311684E-5 0.0 0.0 0.004915510641161751 0.0 20 9.187870357311684E-5 0.0 0.0 0.005650540269746686 0.0 21 9.187870357311684E-5 0.0 0.0 0.0074881143412090225 0.0 22 9.187870357311684E-5 0.0 0.0 0.013827744887754085 0.0 23 9.187870357311684E-5 0.0 0.0 0.02590979440761895 0.0 24 9.187870357311684E-5 0.0 0.0 0.042310142995420304 0.0 25 9.187870357311684E-5 0.0 0.0 0.04929292446697719 0.0 26 9.187870357311684E-5 0.0 0.0 0.05609194853138783 0.0 27 9.187870357311684E-5 0.0 0.0 0.1061658419787365 0.0 28 9.187870357311684E-5 0.0 0.0 0.15862858171898622 0.0 29 9.187870357311684E-5 0.0 0.0 0.22445967282912443 0.0 30 9.187870357311684E-5 0.0 0.0 0.34381010877060325 0.0 31 9.187870357311684E-5 0.0 0.0 0.5038168710431862 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4880 0.0 28.925203 1 GTATTGG 795 0.0 20.710691 1 ATTGGAC 835 0.0 18.610779 3 TGTACCG 60 9.240432E-4 18.5 5 GTATCAA 8530 0.0 17.06858 2 ACGTTTA 110 7.815488E-7 16.818182 26 TTGGACC 1335 0.0 16.490637 4 TATTGGA 1005 0.0 16.383083 2 GCGTTAT 80 3.384304E-4 16.1875 1 CCGTCGA 80 3.384304E-4 16.1875 9 ACCGTCC 80 3.384304E-4 16.1875 8 GGACCCT 1365 0.0 15.450549 6 TGGACCC 1450 0.0 15.310345 5 CGATCGA 75 0.0041059726 14.8 1 ACGACGC 75 0.0041059726 14.8 27 TACGTTA 100 1.0940768E-4 14.8 19 CGTCTGT 455 0.0 14.637363 34 ACGGTGT 105 1.6567044E-4 14.095238 29 TGCGTTA 160 1.7854654E-7 13.875 37 AACAACG 215 1.9826984E-10 13.767442 2 >>END_MODULE