##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088265_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 940998 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.954859627756914 31.0 30.0 33.0 27.0 34.0 2 30.780076046920396 31.0 31.0 34.0 27.0 34.0 3 30.752541450672584 31.0 31.0 34.0 27.0 34.0 4 34.95016673786767 35.0 35.0 37.0 32.0 37.0 5 34.84890403592781 35.0 35.0 37.0 32.0 37.0 6 34.965113634672974 35.0 35.0 37.0 32.0 37.0 7 34.56899695854826 35.0 35.0 37.0 30.0 37.0 8 34.79525354995441 35.0 35.0 37.0 32.0 37.0 9 36.19853921049779 38.0 35.0 39.0 32.0 39.0 10 36.12936478079656 38.0 35.0 39.0 31.0 39.0 11 36.23154565684518 38.0 35.0 39.0 32.0 39.0 12 35.9576853510847 37.0 35.0 39.0 30.0 39.0 13 36.13554013929892 38.0 35.0 39.0 31.0 39.0 14 37.00542934203899 39.0 36.0 40.0 31.0 41.0 15 37.05611807889071 38.0 36.0 40.0 31.0 41.0 16 36.969740637068305 38.0 36.0 40.0 31.0 41.0 17 37.08009368776554 39.0 36.0 40.0 31.0 41.0 18 37.097193617839785 39.0 36.0 40.0 31.0 41.0 19 37.19344568213747 39.0 36.0 40.0 31.0 41.0 20 37.15303964514271 39.0 36.0 40.0 31.0 41.0 21 37.09258361866869 39.0 36.0 40.0 31.0 41.0 22 37.02429760743381 39.0 36.0 40.0 31.0 41.0 23 36.893928573705786 39.0 35.0 40.0 31.0 41.0 24 36.82907190025909 39.0 35.0 40.0 31.0 41.0 25 36.73156372277093 38.0 35.0 40.0 30.0 41.0 26 36.46376825455527 38.0 35.0 40.0 30.0 41.0 27 36.3111271224806 38.0 35.0 40.0 30.0 41.0 28 36.140213900560894 38.0 35.0 40.0 30.0 41.0 29 35.981706656124665 38.0 34.0 40.0 29.0 41.0 30 35.7968348498084 38.0 34.0 40.0 29.0 41.0 31 35.528661059853476 38.0 34.0 40.0 28.0 41.0 32 35.25892616137335 37.0 34.0 40.0 27.0 41.0 33 35.376414190040784 38.0 34.0 40.0 27.0 41.0 34 35.35529618553918 38.0 34.0 40.0 27.0 41.0 35 35.26185071594201 38.0 34.0 40.0 27.0 41.0 36 35.165353167594404 38.0 34.0 40.0 26.0 41.0 37 35.002168973791655 38.0 33.0 40.0 25.0 41.0 38 34.87296784902837 38.0 33.0 40.0 25.0 41.0 39 34.807055912977496 38.0 33.0 40.0 24.0 41.0 40 34.63711718834684 38.0 33.0 40.0 24.0 41.0 41 34.44477246497867 38.0 33.0 40.0 23.0 41.0 42 34.233912293118586 38.0 33.0 40.0 22.0 41.0 43 33.88261186527495 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 3.0 15 4.0 16 9.0 17 31.0 18 83.0 19 166.0 20 416.0 21 780.0 22 1343.0 23 2503.0 24 4084.0 25 6379.0 26 9777.0 27 13842.0 28 19340.0 29 26252.0 30 33403.0 31 41286.0 32 50137.0 33 60668.0 34 72869.0 35 86437.0 36 104496.0 37 128942.0 38 145707.0 39 132040.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.651516793872034 25.558927861695775 14.161454115736696 21.628101228695492 2 17.998125394527936 23.619391327080397 35.67754660477493 22.704936673616736 3 19.840531010692903 26.207282055859842 32.72568060718514 21.22650632626212 4 13.356351448143355 16.409599170242657 35.159798426776675 35.07425095483731 5 11.126166049237087 40.74982093479476 34.66107260589289 13.46294041007526 6 31.489865015653596 36.273509614260604 15.19833198370241 17.038293386383394 7 23.83894546003286 35.931851077260525 21.459237957997786 18.76996550470883 8 27.438953111483766 33.87456721480811 20.232561599493305 18.453918074214823 9 24.94585535782223 13.939349499148776 24.267426710790033 36.847368432238966 10 16.336060225420248 28.611325422583256 33.884981689652896 21.167632662343596 11 31.138642165020542 22.11503106276528 25.047768433089125 21.698558339125057 12 19.938937170961044 28.262440515282712 31.630035345452384 20.168586968303863 13 30.873179326629813 21.530438959487693 28.840868949774602 18.75551276410789 14 20.566568685587004 23.42746743351208 28.903249528691877 27.10271435220904 15 22.856796720078044 29.666375486451617 26.8830539491051 20.593773844365238 16 21.449036023455946 28.741825168597597 27.600483741729526 22.20865506621693 17 18.93404661859005 27.979124291443764 28.400166631597518 24.68666245836867 18 19.942019005353888 26.913553482579132 32.90974050954412 20.234687002522854 19 19.367947647072576 25.602179813347103 34.34555652615627 20.684316013424045 20 23.535862988019105 24.477310259958042 33.09231262978242 18.89451412224043 21 23.00376833957139 25.29877853087892 31.700492455881946 19.996960673667743 22 21.305783859264313 25.16530322062321 32.43322515031913 21.095687769793347 23 20.444889362145297 27.296338568200994 33.251930397301585 19.00684167235212 24 19.110136259588227 26.304519244461734 31.96606156442415 22.61928293152589 25 20.25966048812006 27.101439110391308 33.19454451550376 19.44435588598488 26 21.445529108457194 26.19027883162345 31.64193760241786 20.722254457501503 27 20.36061713202366 27.492406997676934 31.316007047836447 20.830968822462957 28 20.035961819259978 27.200057810962402 31.390077343416245 21.373903026361376 29 19.11364317458698 27.007496296485222 32.32823024065938 21.55063028826841 30 18.58771219492496 27.1623319071879 34.38147583735566 19.86848006053148 31 19.95625920565187 26.54341454498309 33.148954620519916 20.35137162884512 32 20.844146321246164 27.053617542226444 31.2784936843649 20.82374245216249 33 21.87964267724267 26.900694794250356 30.661807995341118 20.55785453316585 34 20.09727969666248 29.517809814686107 30.792307741355458 19.592602747295956 35 18.881549163760177 30.286674360625632 30.95521988357042 19.876556592043766 36 19.848501272053714 26.755104686726224 33.05033591994882 20.346058121271245 37 19.80578067115977 27.103564513420856 32.2550101062914 20.83564470912797 38 20.199405312232333 26.718122674012058 32.69071772734905 20.39175428640656 39 21.2558368880699 26.12311609588968 32.652779283271585 19.968267732768826 40 19.517363480049905 26.931194327724395 31.86871810567079 21.682724086554913 41 20.20705676313871 26.31790928354789 31.79974877736191 21.67528517595149 42 17.86294976184859 27.97359824356694 32.28816639355237 21.875285601032097 43 18.50482147677253 27.73023959668352 31.833861495986177 21.931077430557767 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 161.0 1 180.5 2 200.0 3 458.5 4 717.0 5 717.0 6 1247.5 7 1778.0 8 2011.0 9 2244.0 10 3387.5 11 4531.0 12 4531.0 13 8163.5 14 11796.0 15 19482.5 16 27169.0 17 26052.5 18 24936.0 19 24936.0 20 27068.0 21 29200.0 22 24128.5 23 19057.0 24 20341.5 25 21626.0 26 21626.0 27 24076.5 28 26527.0 29 27429.5 30 28332.0 31 30485.5 32 32639.0 33 32639.0 34 34885.5 35 37132.0 36 39389.0 37 41646.0 38 43147.0 39 44648.0 40 44648.0 41 46310.0 42 47972.0 43 54220.5 44 60469.0 45 76120.5 46 91772.0 47 91772.0 48 93611.0 49 95450.0 50 85908.0 51 76366.0 52 70116.5 53 63867.0 54 63867.0 55 55445.0 56 47023.0 57 38531.5 58 30040.0 59 26148.0 60 22256.0 61 22256.0 62 19444.0 63 16632.0 64 14208.0 65 11784.0 66 10045.0 67 8306.0 68 8306.0 69 6911.5 70 5517.0 71 4742.5 72 3968.0 73 3129.5 74 2291.0 75 2291.0 76 1843.5 77 1396.0 78 1088.0 79 780.0 80 598.0 81 416.0 82 416.0 83 296.0 84 176.0 85 131.0 86 86.0 87 72.0 88 58.0 89 58.0 90 40.5 91 23.0 92 15.5 93 8.0 94 4.5 95 1.0 96 1.0 97 1.0 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 940998.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.47549071241427 #Duplication Level Percentage of deduplicated Percentage of total 1 76.89609172044156 37.275757800152206 2 12.737284288713907 12.348922124778626 3 4.386734979592402 6.37947392283163 4 1.9880231849814773 3.8548159775853534 5 1.0447268142008308 2.5321822489401264 6 0.646269991911778 1.8796952994378866 7 0.42062507826604006 1.4273004952425765 8 0.29846121213825855 1.1574442973619248 9 0.1981770548845433 0.8646056985122363 >10 1.2144985763176595 10.867109437508624 >50 0.09476313402085718 3.2265385533321043 >100 0.05925324935594048 5.633962999879321 >500 0.009320735843211322 3.234867909780893 >1k 0.004882290203586883 4.976339200886083 >5k 2.2192228198122192E-4 0.5559626657049436 >10k+ 6.657668459436658E-4 3.7850213680655442 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12871 1.3678031196665668 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12179 1.2942641748441548 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10134 1.0769417150727207 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 5168 0.5492041428355852 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4337 0.46089364695780444 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 3607 0.3833164363792484 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3262 0.3466532341195199 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 3206 0.3407021056367814 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3077 0.32699325609618723 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 2747 0.29192410610862085 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2459 0.2613183024831084 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 2346 0.2493097753661538 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 2190 0.2327316317356679 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1998 0.2123277626519929 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1933 0.2054202028059571 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1702 0.18087179781466062 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1664 0.1768335320585166 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1644 0.17470812902896712 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1588 0.16875700054622858 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1395 0.14824686131107612 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1326 0.1409142208591304 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1292 0.1373010357088963 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1171 0.12444234738012196 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1144 0.12157305329023016 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1111 0.11806613829147353 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1059 0.11254009041464488 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 991 0.10531372011417664 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 950 0.10095664390360022 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 943 0.1002127528432579 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 2.1254030295494783E-4 0.0 10 0.0 0.0 0.0 2.1254030295494783E-4 0.0 11 0.0 0.0 0.0 4.2508060590989565E-4 0.0 12 0.0 0.0 0.0 7.438910603423174E-4 0.0 13 0.0 0.0 0.0 8.501612118197913E-4 0.0 14 0.0 0.0 0.0 9.564313632972652E-4 0.0 15 0.0 0.0 0.0 0.001275241817729687 0.0 16 0.0 0.0 0.0 0.0024442134839819 0.0 17 0.0 0.0 0.0 0.003825725453189061 0.0 18 0.0 0.0 0.0 0.004569616513531378 0.0 19 0.0 0.0 0.0 0.005100967270918748 0.0 20 0.0 0.0 0.0 0.005526047876828644 0.0 21 0.0 0.0 0.0 0.007863991209333069 0.0 22 0.0 0.0 0.0 0.013708849540594136 0.0 23 0.0 0.0 0.0 0.021572840749927207 0.0 24 0.0 0.0 0.0 0.03411271862426913 0.0 25 0.0 0.0 0.0 0.0415516292276923 0.0 26 0.0 0.0 0.0 0.05143475331509738 0.0 27 0.0 0.0 0.0 0.11891629950329331 0.0 28 0.0 0.0 0.0 0.1919238935683179 0.0 29 0.0 0.0 0.0 0.2692885638439189 0.0 30 0.0 0.0 0.0 0.4286937910601298 0.0 31 0.0 0.0 0.0 0.6428281462872397 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2900 0.0 30.87586 1 ATTGGAC 220 0.0 26.90909 3 CGTCTGT 325 0.0 22.76923 34 CATAGAC 50 2.701597E-4 22.2 3 GCGTCTG 385 0.0 20.662336 33 GCCTATG 45 0.0038253004 20.555555 1 TTGGACC 380 0.0 20.447369 4 GTATAGA 55 5.1421433E-4 20.181818 1 GGACCCT 365 0.0 19.767122 6 GTCTTAC 75 9.262843E-6 19.733334 1 GTATTGG 235 0.0 19.680851 1 TGCGTCT 410 0.0 18.951221 32 GTATCAA 4980 0.0 18.574297 2 GCAAGGT 50 0.0070339562 18.5 3 ACGATCT 90 2.1513715E-6 18.5 32 TGCGACG 50 0.0070339562 18.5 22 CGATCTG 90 2.1513715E-6 18.5 33 GACCCTC 410 0.0 18.048782 7 TACTAGG 95 3.6049805E-6 17.526316 2 CCGAATT 75 2.0667646E-4 17.266666 14 >>END_MODULE