##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088264_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 553042 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.982030297879728 31.0 30.0 33.0 27.0 34.0 2 30.826566517552013 31.0 31.0 34.0 27.0 34.0 3 30.82226847147233 31.0 31.0 34.0 27.0 34.0 4 35.00941881448425 35.0 35.0 37.0 32.0 37.0 5 34.9310721428029 35.0 35.0 37.0 32.0 37.0 6 35.03220008606941 36.0 35.0 37.0 32.0 37.0 7 34.63464076869388 35.0 35.0 37.0 30.0 37.0 8 34.86021314836848 35.0 35.0 37.0 32.0 37.0 9 36.27820491029615 38.0 35.0 39.0 32.0 39.0 10 36.2187175657545 38.0 35.0 39.0 32.0 39.0 11 36.31593983820397 38.0 35.0 39.0 32.0 39.0 12 36.04758228127339 38.0 35.0 39.0 30.0 39.0 13 36.211378159344136 38.0 35.0 39.0 32.0 39.0 14 37.09478665273162 39.0 36.0 40.0 31.0 41.0 15 37.13407480806159 39.0 36.0 40.0 31.0 41.0 16 37.06676527280026 39.0 36.0 40.0 31.0 41.0 17 37.16804329508428 39.0 36.0 40.0 31.0 41.0 18 37.19451868031723 39.0 36.0 40.0 32.0 41.0 19 37.271299467309895 39.0 36.0 40.0 31.0 41.0 20 37.23661855699929 39.0 36.0 40.0 31.0 41.0 21 37.17119495445192 39.0 36.0 40.0 31.0 41.0 22 37.100650583499984 39.0 36.0 40.0 31.0 41.0 23 36.96845628360956 39.0 35.0 40.0 31.0 41.0 24 36.88974435937958 39.0 35.0 40.0 31.0 41.0 25 36.80052871210505 39.0 35.0 40.0 30.0 41.0 26 36.544108765699534 38.0 35.0 40.0 30.0 41.0 27 36.399777955381325 38.0 35.0 40.0 30.0 41.0 28 36.24747487532593 38.0 35.0 40.0 30.0 41.0 29 36.057648424531955 38.0 35.0 40.0 30.0 41.0 30 35.87883379562493 38.0 34.0 40.0 29.0 41.0 31 35.60591781456019 38.0 34.0 40.0 28.0 41.0 32 35.355508261578684 38.0 34.0 40.0 27.0 41.0 33 35.47625135161525 38.0 34.0 40.0 28.0 41.0 34 35.45343210823048 38.0 34.0 40.0 27.0 41.0 35 35.34951775814495 38.0 34.0 40.0 27.0 41.0 36 35.24282604214508 38.0 34.0 40.0 26.0 41.0 37 35.07779698467748 38.0 33.0 40.0 26.0 41.0 38 34.93545336520554 38.0 33.0 40.0 25.0 41.0 39 34.88259300378633 38.0 33.0 40.0 25.0 41.0 40 34.70595180836175 38.0 33.0 40.0 24.0 41.0 41 34.52257694713964 38.0 33.0 40.0 23.0 41.0 42 34.30100788005251 38.0 33.0 40.0 22.0 41.0 43 33.94493004147967 37.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 1.0 16 7.0 17 12.0 18 44.0 19 99.0 20 228.0 21 445.0 22 758.0 23 1338.0 24 2273.0 25 3617.0 26 5481.0 27 8043.0 28 11117.0 29 14779.0 30 19221.0 31 23361.0 32 28907.0 33 34736.0 34 42366.0 35 50315.0 36 60889.0 37 77350.0 38 87286.0 39 80369.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.23499481052072 25.212551668770182 13.901837473464946 21.65061604724415 2 17.89068461346516 23.108733152274148 36.11570188159308 22.884880352667608 3 19.68259191887777 26.547712470300628 32.49915919586577 21.270536414955828 4 12.8907026952745 15.931158935487721 35.2797798358895 35.89835853334828 5 10.981263629163788 40.78388259842833 34.69682230282691 13.538031469580972 6 31.54950256942511 36.084601169531425 15.301550334332656 17.06434592671081 7 23.924584389612363 35.765818870899494 21.46943631767569 18.84016042181245 8 27.926631250429445 33.4442953699719 20.111673254472535 18.51740012512612 9 24.96790478842475 13.631876060046071 24.09401094311101 37.30620820841817 10 16.45950940434904 28.183754579218217 33.53380032619584 21.822935690236907 11 31.33776458207514 21.98440624762676 25.061206924609703 21.616622245688394 12 20.104982985017415 28.088825080192827 31.60121654413227 20.20497539065749 13 31.06870725912318 21.014317176633963 28.952412294183805 18.964563270059053 14 20.87635297138373 22.90386625247269 28.7894951920469 27.430285584096687 15 22.961547224261448 29.357806459545564 27.013319060758494 20.667327255434486 16 21.76453144607462 28.439792999446695 27.461747932345105 22.333927622133583 17 19.101080930562237 27.65630820082381 28.08159235645756 25.161018512156403 18 20.184904582292123 26.627091613295196 32.653035393333596 20.534968411079085 19 19.496530100788007 25.292111629858134 34.304808676375394 20.90654959297847 20 23.969608094864405 24.010111347781905 32.84108621045056 19.179194346903127 21 23.340722766082866 24.97115951410562 31.530155033433267 20.15796268637825 22 21.53742392078721 24.71656763862419 32.34238990890385 21.403618531684753 23 20.495550066721876 26.786392353564466 33.53597014331642 19.182087436397236 24 19.064555675699133 26.162389113304236 31.79903153829185 22.974023672704785 25 20.38814411925315 26.860889408037725 33.10309162776064 19.647874844948486 26 21.75422481475186 25.859699624983275 31.653834609306347 20.732240950958516 27 20.45757826711172 27.434263582151086 31.13145113752663 20.976707013210568 28 20.068819366341074 26.86685640511932 31.405752185186657 21.658572043352947 29 19.21644287413976 26.821290245587136 32.37981925423385 21.582447626039254 30 18.579420731156045 27.00897942651734 34.405162718202234 20.00643712412439 31 20.02867774961034 26.349897476141056 33.193139038264725 20.428285735983888 32 21.17289464452971 26.766140727105718 30.962928674494883 21.098035953869687 33 21.995436151323048 26.80501661718278 30.428249572365207 20.77129765912896 34 20.20913420680527 29.47298758502971 30.579051862245542 19.738826345919477 35 18.886992307998305 30.35375251789195 30.739979965355253 20.01927520875449 36 19.894329906227735 26.78259517360345 32.863869290216655 20.459205629952155 37 19.94260833716065 27.08709284285823 31.906799121947337 21.063499698033784 38 20.34981068345623 26.72563747418822 32.47275975423205 20.451792088123504 39 21.28699086145356 26.131830855522725 32.290133479916534 20.291044803107177 40 19.492732920826988 26.99559888760709 31.646240249384316 21.865427942181608 41 20.587948112439925 26.465801873998718 31.413888999388835 21.532361014172523 42 18.04618817377342 28.00872266482473 31.96520336610963 21.97988579529222 43 18.646504243800653 27.766968873973408 31.535398758141337 22.05112812408461 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 54.0 1 74.0 2 94.0 3 265.0 4 436.0 5 436.0 6 768.0 7 1100.0 8 1174.0 9 1248.0 10 1910.5 11 2573.0 12 2573.0 13 4715.5 14 6858.0 15 11529.0 16 16200.0 17 15486.5 18 14773.0 19 14773.0 20 15720.0 21 16667.0 22 13479.0 23 10291.0 24 11178.0 25 12065.0 26 12065.0 27 13015.0 28 13965.0 29 14449.0 30 14933.0 31 16063.5 32 17194.0 33 17194.0 34 18623.5 35 20053.0 36 21988.5 37 23924.0 38 24903.5 39 25883.0 40 25883.0 41 27254.5 42 28626.0 43 32859.0 44 37092.0 45 46606.0 46 56120.0 47 56120.0 48 57188.5 49 58257.0 50 52543.0 51 46829.0 52 42973.0 53 39117.0 54 39117.0 55 33630.0 56 28143.0 57 22821.0 58 17499.0 59 15138.5 60 12778.0 61 12778.0 62 11266.0 63 9754.0 64 8409.5 65 7065.0 66 6016.0 67 4967.0 68 4967.0 69 4198.5 70 3430.0 71 2813.0 72 2196.0 73 1724.5 74 1253.0 75 1253.0 76 970.5 77 688.0 78 565.5 79 443.0 80 342.5 81 242.0 82 242.0 83 184.0 84 126.0 85 86.0 86 46.0 87 37.0 88 28.0 89 28.0 90 28.0 91 28.0 92 15.0 93 2.0 94 2.0 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 553042.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 54.60777546461378 #Duplication Level Percentage of deduplicated Percentage of total 1 82.77571065065133 45.20197421134608 2 9.870764688447725 10.780410035415835 3 2.933366277732339 4.805538211496323 4 1.2520697092938542 2.734909662046521 5 0.6924389496993288 1.890627534406697 6 0.4866213030344042 1.5943984111440317 7 0.3152559000192879 1.2050796381503601 8 0.24677014648649487 1.078045500056349 9 0.19374491684754364 0.9521981024958835 >10 1.103614900089217 10.873235091103137 >50 0.06934369389891556 2.6318513436260482 >100 0.04823909103964727 5.723778147713441 >500 0.006699873755506565 2.4055637010588944 >1k 0.004354917941079266 4.265439453809144 >5k 0.0010049810633259847 3.8569509561312345 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7515 1.3588479717634465 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7396 1.3373306186510245 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6173 1.1161900904452102 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3386 0.6122500641904232 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2502 0.45240686964100374 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2093 0.37845226944789007 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2037 0.368326456218515 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1908 0.34500092217227624 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1876 0.339214743184062 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1588 0.28713913229013344 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1580 0.2856925875430799 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1422 0.2571233287887719 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1377 0.2489865145865956 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1280 0.23144715952857106 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1190 0.21517353112421841 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1078 0.19492190466546847 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 974 0.17611682295377204 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 928 0.16779919065821403 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 909 0.1643636468839618 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 887 0.1603856488295645 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 740 0.13380538910245515 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 692 0.12512612062013373 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 671 0.1213289406591181 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 671 0.1213289406591181 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 661 0.11952075972530116 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 639 0.11554276167090383 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 561 0.10143895038713155 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 554 0.10017322373345966 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.8081809338169614E-4 0.0 10 0.0 0.0 0.0 1.8081809338169614E-4 0.0 11 0.0 0.0 0.0 1.8081809338169614E-4 0.0 12 0.0 0.0 0.0 3.6163618676339227E-4 0.0 13 0.0 0.0 0.0 3.6163618676339227E-4 0.0 14 0.0 0.0 0.0 9.040904669084807E-4 0.0 15 0.0 0.0 0.0 0.0018081809338169614 0.0 16 0.0 0.0 0.0 0.0030739075874888343 0.0 17 0.0 0.0 0.0 0.005605360894832581 0.0 18 0.0 0.0 0.0 0.005786178988214276 0.0 19 0.0 0.0 0.0 0.006871087548504453 0.0 20 0.0 0.0 0.0 0.007955996108794631 0.0 21 0.0 0.0 0.0 0.011210721789665161 0.0 22 0.0 0.0 0.0 0.018805081711696398 0.0 23 0.0 0.0 0.0 0.028026804474162902 0.0 24 0.0 0.0 0.0 0.045746977625569125 0.0 25 0.0 0.0 0.0 0.05279888326745528 0.0 26 0.0 0.0 0.0 0.06491369552402891 0.0 27 0.0 0.0 0.0 0.13452866147598194 0.0 28 0.0 0.0 0.0 0.2017929922139729 0.0 29 0.0 0.0 0.0 0.2764708647806134 0.0 30 0.0 0.0 0.0 0.427273154660948 0.0 31 0.0 0.0 0.0 0.6310551459021195 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTTA 30 3.597084E-4 30.833334 26 GGTATCA 1775 0.0 28.140844 1 GCCGTAC 35 8.8635506E-4 26.428572 1 TATACTG 55 1.9003452E-5 23.545454 5 AGCCGTC 40 0.001929927 23.125 12 GTATTGG 145 0.0 21.689655 1 GCCGTCA 60 3.7217862E-5 21.583334 13 ATTGGAC 160 0.0 20.8125 3 CGGGATA 45 0.0038233362 20.555555 24 TACCGTC 55 5.1384576E-4 20.181818 7 TTGGACC 310 0.0 19.096775 4 GGACCCT 285 0.0 18.824562 6 ACCGACG 90 2.14811E-6 18.5 8 GTGATAC 50 0.007030379 18.5 3 TCTAGAC 50 0.007030379 18.5 3 ATTCCGT 50 0.007030379 18.5 29 TAGATTG 60 9.228554E-4 18.5 5 ACACTTA 60 9.228554E-4 18.5 6 TATCCCG 50 0.007030379 18.5 5 TCACGTT 50 0.007030379 18.5 24 >>END_MODULE