##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088263_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1249401 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.98020011189362 31.0 30.0 33.0 27.0 34.0 2 30.83876673702038 31.0 31.0 34.0 27.0 34.0 3 30.866533642921688 31.0 31.0 34.0 27.0 34.0 4 35.02876418379687 35.0 35.0 37.0 32.0 37.0 5 34.90974234853342 35.0 35.0 37.0 32.0 37.0 6 35.00599487274302 36.0 35.0 37.0 32.0 37.0 7 34.65470093268694 35.0 35.0 37.0 31.0 37.0 8 34.84575248459062 35.0 35.0 37.0 32.0 37.0 9 36.30185264778882 38.0 35.0 39.0 32.0 39.0 10 36.209074588542826 38.0 35.0 39.0 32.0 39.0 11 36.30276348426166 38.0 35.0 39.0 32.0 39.0 12 36.05041055673879 38.0 35.0 39.0 30.0 39.0 13 36.21777395728033 38.0 35.0 39.0 32.0 39.0 14 37.14200244757288 39.0 36.0 40.0 31.0 41.0 15 37.194521214566024 39.0 36.0 40.0 32.0 41.0 16 37.11539609781007 39.0 36.0 40.0 31.0 41.0 17 37.18589147919683 39.0 36.0 40.0 31.0 41.0 18 37.191648638027345 39.0 36.0 40.0 31.0 41.0 19 37.266075503381224 39.0 36.0 40.0 31.0 41.0 20 37.22454360129374 39.0 36.0 40.0 31.0 41.0 21 37.16481337857101 39.0 36.0 40.0 31.0 41.0 22 37.083600861532844 39.0 36.0 40.0 31.0 41.0 23 36.97519771474491 39.0 36.0 40.0 31.0 41.0 24 36.89867144335565 39.0 35.0 40.0 31.0 41.0 25 36.80572370279838 39.0 35.0 40.0 30.0 41.0 26 36.565915986940944 38.0 35.0 40.0 30.0 41.0 27 36.411020160861085 38.0 35.0 40.0 30.0 41.0 28 36.27549601769168 38.0 35.0 40.0 30.0 41.0 29 36.10944284501133 38.0 35.0 40.0 30.0 41.0 30 35.95195617740021 38.0 34.0 40.0 29.0 41.0 31 35.729359909268524 38.0 34.0 40.0 29.0 41.0 32 35.46392551310588 38.0 34.0 40.0 27.0 41.0 33 35.62088872987936 38.0 34.0 40.0 28.0 41.0 34 35.63016437476839 38.0 34.0 40.0 28.0 41.0 35 35.55506278608709 38.0 34.0 40.0 27.0 41.0 36 35.469800328317326 38.0 34.0 40.0 27.0 41.0 37 35.321495660720615 38.0 34.0 40.0 27.0 41.0 38 35.19707203692009 38.0 34.0 40.0 26.0 41.0 39 35.17722732733526 38.0 34.0 40.0 26.0 41.0 40 35.05803741152761 38.0 34.0 40.0 25.0 41.0 41 34.907661351319554 38.0 33.0 40.0 24.0 41.0 42 34.75466883730684 38.0 33.0 40.0 24.0 41.0 43 34.40146998441653 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 0.0 13 0.0 14 0.0 15 7.0 16 16.0 17 36.0 18 96.0 19 211.0 20 428.0 21 961.0 22 1713.0 23 2954.0 24 4799.0 25 7743.0 26 11558.0 27 17342.0 28 24097.0 29 32149.0 30 41505.0 31 52000.0 32 63628.0 33 77821.0 34 94075.0 35 112715.0 36 137855.0 37 171408.0 38 201569.0 39 192714.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.695422846628105 25.383763899660718 13.616124847026695 22.304688406684484 2 17.835346698137748 23.729611229701273 35.494689054995156 22.940353017165826 3 19.31365510352561 26.65413266037085 32.2581781189546 21.77403411714894 4 13.47085523382805 17.144695738197743 36.304837278023626 33.07961174995058 5 11.62060859563903 40.25032795715707 34.91793267333706 13.211130773866836 6 30.78435186141199 37.60169873403335 15.91858818745943 15.695361217095233 7 24.117076903252038 35.01117735618909 22.75946633626834 18.112279404290536 8 26.453876697713547 34.50197334562722 20.700319593149036 18.343830363510193 9 25.072654816187917 14.194161842354857 23.81821368799929 36.91496965345794 10 16.07410271001864 28.593221871921028 34.572807289253014 20.759868128807323 11 31.450431046557508 23.294442696940372 24.397131105225625 20.857995151276494 12 19.53376057806901 28.51334359425036 31.692386991846494 20.26050883583413 13 29.42986279024909 22.1039522139009 28.228567129368393 20.23761786648162 14 20.534560161229262 23.54264163387095 28.913375289438697 27.00942291546109 15 22.942353976025313 30.085456950970908 26.069452481629195 20.902736591374588 16 21.403856728144127 28.74297363296492 27.860470737577447 21.99269890131351 17 19.43467309534729 28.73561010436201 28.672699957819788 23.157016842470913 18 19.99790299511526 27.688708429079217 31.5698482712916 20.743540304513925 19 19.904098043782582 26.962360363085992 33.14692400598367 19.986617587147762 20 22.405216579785034 26.141086808798775 32.00085480962478 19.45284180179142 21 21.995980473843066 26.680705394024816 31.054321230733766 20.26899290139835 22 21.36639877829456 26.59578470002825 31.52486671613037 20.512949805546818 23 20.64373247660279 27.75425984131596 31.74881403168398 19.853193650397273 24 19.639571282558602 27.548081040434575 31.10170393652638 21.710643740480435 25 20.563614083868988 27.914256511720414 31.74937430016464 19.772755104245952 26 21.07746031898486 27.431785311521278 30.85998810630054 20.630766263193323 27 20.390090931574413 28.130520145253605 30.709516000067232 20.769872923104753 28 20.16438277222445 28.274989374908454 30.752016366242703 20.80861148662439 29 19.556331394004005 27.944350932967076 31.540154041816837 20.95916363121208 30 19.288603098604852 28.333817565377327 32.51614173511947 19.861437600898352 31 20.357835474759504 27.84734444745922 31.667415025280114 20.127405052501157 32 20.62180196750283 28.27586979680663 30.756258399024812 20.34606983666573 33 21.117559534528947 28.21007826950675 30.229606027208238 20.44275616875607 34 20.23153495154878 29.155971541562714 30.55712297332882 20.05537053355968 35 19.563534845898154 29.467961046933688 30.776908294454703 20.19159581271345 36 20.105954773527472 27.662055657070866 31.643163403903152 20.588826165498507 37 19.99958380055723 27.48172924465404 31.48756884298956 21.031118111799174 38 20.050728309005674 27.5476008103083 31.672217326542878 20.729453554143145 39 20.627244575600628 27.02871215886653 31.903127978927504 20.44091528660534 40 19.62196284459513 27.211439721914743 31.732966437516858 21.43363099597327 41 19.875924543041027 26.742975233732004 31.69830983007057 21.682790393156402 42 18.53136022782117 27.809486305837755 31.624034237206473 22.0351192291346 43 18.793886030185664 27.373677466241826 31.74921422345588 22.083222280116633 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 203.0 1 244.0 2 285.0 3 665.0 4 1045.0 5 1045.0 6 1696.5 7 2348.0 8 2630.0 9 2912.0 10 4310.0 11 5708.0 12 5708.0 13 9899.0 14 14090.0 15 21847.0 16 29604.0 17 28820.0 18 28036.0 19 28036.0 20 30934.0 21 33832.0 22 29308.0 23 24784.0 24 27964.0 25 31144.0 26 31144.0 27 34407.5 28 37671.0 29 40392.5 30 43114.0 31 46199.5 32 49285.0 33 49285.0 34 53897.5 35 58510.0 36 62652.5 37 66795.0 38 69438.0 39 72081.0 40 72081.0 41 74336.5 42 76592.0 43 82350.5 44 88109.0 45 98265.0 46 108421.0 47 108421.0 48 108790.0 49 109159.0 50 98177.5 51 87196.0 52 79938.5 53 72681.0 54 72681.0 55 64525.5 56 56370.0 57 49128.0 58 41886.0 59 37005.0 60 32124.0 61 32124.0 62 28086.0 63 24048.0 64 20711.5 65 17375.0 66 14697.0 67 12019.0 68 12019.0 69 10253.5 70 8488.0 71 7055.0 72 5622.0 73 4512.5 74 3403.0 75 3403.0 76 2685.5 77 1968.0 78 1549.0 79 1130.0 80 889.5 81 649.0 82 649.0 83 486.0 84 323.0 85 259.0 86 195.0 87 151.0 88 107.0 89 107.0 90 86.5 91 66.0 92 41.5 93 17.0 94 11.0 95 5.0 96 5.0 97 3.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1249401.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.480040628353045 #Duplication Level Percentage of deduplicated Percentage of total 1 75.34328414283551 37.27988760461049 2 13.378813840409217 13.239685047652403 3 4.817263963778854 7.150752499358361 4 2.2169934683662755 4.387877075502265 5 1.139570168569383 2.8192989119836103 6 0.6603449933266469 1.96043382591192 7 0.43024058788066616 1.4901825237811301 8 0.29102393334612897 1.1519900836631654 9 0.22900167958307274 1.0197911168758371 >10 1.295161433212286 11.98318724939875 >50 0.12349741375411323 4.205436837351889 >100 0.06596535048587707 6.0160670365064375 >500 0.0057289973300028215 1.88977980708171 >1k 0.00261897020800129 2.5567466228069864 >5k 1.6368563800008064E-4 0.7956626590995894 >10k+ 3.273712760001613E-4 2.0532210984154817 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 12998 1.0403385302236832 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 12353 0.9887137916489581 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 9824 0.7862967934234084 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4520 0.36177336179497216 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3549 0.2840561196925567 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2694 0.21562332669815376 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2235 0.17888572203800063 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1940 0.15527440749607213 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1937 0.15503429243293387 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1896 0.1517527199033777 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1717 0.13742585446946176 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1658 0.13270359156107606 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1580 0.12646059991948141 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1447 0.11581549878701873 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1442 0.11541530701512165 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1313 0.10509035930017663 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1296 0.10372970727572653 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1262 0.1010084032268263 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 1.6007670875883723E-4 0.0 10 0.0 0.0 0.0 3.2015341751767445E-4 0.0 11 0.0 0.0 0.0 4.001917718970931E-4 0.0 12 0.0 0.0 0.0 4.802301262765117E-4 0.0 13 0.0 0.0 0.0 4.802301262765117E-4 0.0 14 0.0 0.0 0.0 5.602684806559304E-4 0.0 15 0.0 0.0 0.0 7.203451894147676E-4 0.0 16 0.0 0.0 0.0 0.0011205369613118607 0.0 17 0.0 0.0 0.0 0.002080997213864884 0.0 18 8.003835437941861E-5 0.0 0.0 0.0022410739226237215 0.0 19 8.003835437941861E-5 0.0 0.0 0.002961419112038489 0.0 20 8.003835437941861E-5 0.0 0.0 0.003761802655832675 0.0 21 8.003835437941861E-5 0.0 0.0 0.004722262908385699 0.0 22 8.003835437941861E-5 0.0 0.0 0.007123413539768257 0.0 23 8.003835437941861E-5 0.0 0.0 0.012405944928809885 0.0 24 8.003835437941861E-5 0.0 0.0 0.022890969352513724 0.0 25 8.003835437941861E-5 0.0 0.0 0.0300944212466614 0.0 26 8.003835437941861E-5 0.0 0.0 0.041539905922918265 0.0 27 8.003835437941861E-5 0.0 0.0 0.10509035930017664 0.0 28 8.003835437941861E-5 0.0 0.0 0.17096192495443815 0.0 29 8.003835437941861E-5 0.0 0.0 0.23963483301197935 0.0 30 8.003835437941861E-5 0.0 0.0 0.36857662191722274 0.0 31 8.003835437941861E-5 0.0 0.0 0.5688325845745281 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3375 0.0 25.214813 1 ATCTGCG 115 0.0 24.130432 36 TACGACG 40 0.0019312802 23.125002 5 TCACGTT 115 5.456968E-12 22.521738 24 GCCGGAA 135 0.0 21.925924 15 CCCGTAT 60 3.7266214E-5 21.583332 1 ATCTACG 45 0.0038259907 20.555557 1 CGCATTG 90 9.480027E-8 20.555557 14 CGCCGGA 150 0.0 19.733334 14 TAAACGT 100 2.875422E-7 18.499998 4 CAATGCG 75 2.0674472E-4 17.266666 19 CCGGTCC 75 2.0674472E-4 17.266666 9 TGGCGTA 65 0.0015800382 17.076923 24 ATCACGT 130 1.3933459E-8 17.076923 23 ACGCTAT 65 0.0015800382 17.076923 22 GTATCAA 5275 0.0 16.763979 2 TATACCG 190 1.8189894E-12 16.552631 5 CGTCGCA 90 4.4464534E-5 16.444445 11 ACGTTTA 135 2.2197128E-8 16.444443 26 CTGTGCG 125 1.6579361E-7 16.279999 9 >>END_MODULE