##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088261_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2714894 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.047335549748905 31.0 31.0 33.0 27.0 34.0 2 30.869693255058944 31.0 31.0 34.0 27.0 34.0 3 30.8664673464231 31.0 31.0 34.0 27.0 34.0 4 35.03254086531555 35.0 35.0 37.0 32.0 37.0 5 34.939014930233 35.0 35.0 37.0 32.0 37.0 6 35.049287375492376 36.0 35.0 37.0 32.0 37.0 7 34.689217332242066 35.0 35.0 37.0 31.0 37.0 8 34.90070588391296 36.0 35.0 37.0 32.0 37.0 9 36.33968287527985 38.0 35.0 39.0 32.0 39.0 10 36.26606121638635 38.0 35.0 39.0 32.0 39.0 11 36.353850647575925 38.0 35.0 39.0 32.0 39.0 12 36.101928104743685 38.0 35.0 39.0 31.0 39.0 13 36.27220068260492 38.0 35.0 39.0 32.0 39.0 14 37.203626366259606 39.0 36.0 40.0 32.0 41.0 15 37.248544142054904 39.0 36.0 40.0 32.0 41.0 16 37.16089615285164 39.0 36.0 40.0 31.0 41.0 17 37.24493368801876 39.0 36.0 40.0 32.0 41.0 18 37.24291224629764 39.0 36.0 40.0 32.0 41.0 19 37.327019397442406 39.0 36.0 40.0 32.0 41.0 20 37.28576843147467 39.0 36.0 40.0 31.0 41.0 21 37.23004544560487 39.0 36.0 40.0 31.0 41.0 22 37.14462148430105 39.0 36.0 40.0 31.0 41.0 23 37.0321043841859 39.0 36.0 40.0 31.0 41.0 24 36.957753783388966 39.0 36.0 40.0 31.0 41.0 25 36.87793519746996 39.0 35.0 40.0 31.0 41.0 26 36.61872655064986 38.0 35.0 40.0 30.0 41.0 27 36.470085756570974 38.0 35.0 40.0 30.0 41.0 28 36.306632229471944 38.0 35.0 40.0 30.0 41.0 29 36.1443805909181 38.0 35.0 40.0 30.0 41.0 30 35.98009425045692 38.0 35.0 40.0 29.0 41.0 31 35.73208419923577 38.0 34.0 40.0 29.0 41.0 32 35.509213619389925 38.0 34.0 40.0 27.0 41.0 33 35.63436951866261 38.0 34.0 40.0 29.0 41.0 34 35.630556846786654 38.0 34.0 40.0 28.0 41.0 35 35.5374091953498 38.0 34.0 40.0 27.0 41.0 36 35.44874459186988 38.0 34.0 40.0 27.0 41.0 37 35.2918994259076 38.0 34.0 40.0 26.0 41.0 38 35.15440934342188 38.0 34.0 40.0 26.0 41.0 39 35.11524906681439 38.0 34.0 40.0 25.0 41.0 40 34.96191085176806 38.0 33.0 40.0 25.0 41.0 41 34.80281697922644 38.0 33.0 40.0 24.0 41.0 42 34.615411504095555 38.0 33.0 40.0 23.0 41.0 43 34.27077152920151 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 2.0 13 2.0 14 4.0 15 10.0 16 41.0 17 86.0 18 230.0 19 524.0 20 1089.0 21 2088.0 22 3775.0 23 6492.0 24 10663.0 25 16928.0 26 25824.0 27 37062.0 28 51788.0 29 70509.0 30 90392.0 31 111543.0 32 136913.0 33 166968.0 34 201883.0 35 241659.0 36 295535.0 37 372239.0 38 440702.0 39 429942.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.640148013145264 24.944914976422652 13.31116426645018 22.1037727439819 2 17.95572865828279 22.950877640158325 36.0284416260819 23.06495207547698 3 19.793553634138203 26.59356129557913 32.04368200010755 21.569203070175117 4 13.021944871512478 15.991895079513233 35.53888291771244 35.44727713126184 5 11.190492151811451 40.574585969102294 34.826847751698594 13.408074127387662 6 31.5400527608076 36.17305132355075 15.496221951943612 16.79067396369803 7 24.417306900379902 35.33265018818415 21.717827657359734 18.532215254076217 8 27.550062728047575 33.98644661633198 20.20811862267919 18.25537203294125 9 25.164628895271786 13.68414383765996 23.59322316083059 37.55800410623766 10 16.150059634004126 27.856667700470073 33.96220994263496 22.031062722890837 11 31.447268291137703 21.765969500098347 25.190780929200184 21.59598127956377 12 20.05861002308009 27.37561761158999 32.069318360127504 20.496454005202413 13 30.772103809577832 20.934371655025945 28.982126005656205 19.31139852974002 14 20.69830350650891 22.644530504690056 28.718100964531214 27.939065024269826 15 23.105579812692504 28.89431410581776 27.058846496400964 20.941259585088773 16 21.807849588234383 28.469693476062048 27.368545512274146 22.353911423429423 17 19.279168910462065 27.29174693376611 28.233698995246225 25.195385160525603 18 20.398733799551657 26.555732931009462 32.383842610429724 20.661690659009153 19 19.717086560285598 25.118328745063344 33.74382204240755 21.420762652243514 20 24.088785786848398 23.95946213737995 32.52178538093936 19.429966694832284 21 23.365479462549917 24.884802132237944 31.249875685754212 20.499842719457924 22 21.780334701833663 24.539668952084316 32.19381677516691 21.486179570915105 23 20.739741588437706 26.408360694745358 33.23971396304975 19.61218375376718 24 19.5021610420149 25.62483102471036 31.640019831345167 23.23298810192958 25 20.72784425469282 26.511237639480584 32.709011843556326 20.05190626227028 26 22.002332319420205 25.45101208371303 31.350174260947206 21.19648133591956 27 20.8575362426673 26.86845232263212 30.911925106468246 21.362086328232337 28 20.45626827419413 26.35712480855606 31.238015185859926 21.94859173138988 29 19.4978146476437 26.27712168504553 32.218790125876 22.00627354143477 30 19.04033822314978 26.481475888193057 33.97749599063536 20.5006898980218 31 20.363446970673625 25.945801198868168 32.75380180589003 20.93695002456818 32 21.47008317820143 26.284414787465 30.81678327035973 21.42871876397384 33 22.427468623084362 26.05505039975778 30.441667335814955 21.075813641342904 34 20.663090345332083 28.70907667113338 30.37488756467103 20.2529454188635 35 19.468936908770658 29.53872232212381 30.652467462818066 20.339873306287465 36 20.379064523329458 26.094609955305803 32.60985511773203 20.9164704036327 37 20.513986918089618 26.37027449322147 31.736008846017562 21.37972974267135 38 20.79064596997157 25.981124861596804 32.25551347492757 20.972715693504057 39 21.6693911438163 25.49528637213829 32.19123840562468 20.64408407842074 40 20.108409389095854 26.133469667692367 31.438022994636256 22.320097948575523 41 20.977283090978872 25.72188822105025 31.23366879148873 22.067159896482146 42 18.630340632083612 27.358305701806408 31.61268911419746 22.39866455191252 43 19.356519996729155 26.988493841748518 31.348295734566435 22.306690426955896 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 244.0 1 343.5 2 443.0 3 1106.5 4 1770.0 5 1770.0 6 3115.0 7 4460.0 8 5030.0 9 5600.0 10 8706.5 11 11813.0 12 11813.0 13 21340.5 14 30868.0 15 50151.0 16 69434.0 17 67695.0 18 65956.0 19 65956.0 20 71602.0 21 77248.0 22 63938.5 23 50629.0 24 54889.5 25 59150.0 26 59150.0 27 65030.0 28 70910.0 29 74722.0 30 78534.0 31 83537.0 32 88540.0 33 88540.0 34 95574.5 35 102609.0 36 110231.0 37 117853.0 38 122635.0 39 127417.0 40 127417.0 41 133369.0 42 139321.0 43 158185.0 44 177049.0 45 221629.0 46 266209.0 47 266209.0 48 268054.5 49 269900.0 50 245335.0 51 220770.0 52 205549.5 53 190329.0 54 190329.0 55 165859.5 56 141390.0 57 118741.0 58 96092.0 59 84827.0 60 73562.0 61 73562.0 62 64309.5 63 55057.0 64 48195.0 65 41333.0 66 34990.5 67 28648.0 68 28648.0 69 24167.0 70 19686.0 71 16734.5 72 13783.0 73 10990.5 74 8198.0 75 8198.0 76 6426.5 77 4655.0 78 3510.0 79 2365.0 80 1893.5 81 1422.0 82 1422.0 83 1061.5 84 701.0 85 574.0 86 447.0 87 350.5 88 254.0 89 254.0 90 220.0 91 186.0 92 114.0 93 42.0 94 27.0 95 12.0 96 12.0 97 6.5 98 1.0 99 2.5 100 4.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2714894.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.030655479797225 #Duplication Level Percentage of deduplicated Percentage of total 1 73.43288937336622 31.598653635113855 2 13.995705147832691 12.044887328264261 3 5.162228985224434 6.664022909130477 4 2.4334508686679497 4.188519438266553 5 1.3433796709779295 2.890325390020732 6 0.791730148837802 2.0441200360564826 7 0.5288863534058971 1.5930828522962803 8 0.35914306590338074 1.236332922947719 9 0.2694812817579692 1.0436360574223207 >10 1.4473405371493115 11.591445996784786 >50 0.1419499532014283 4.232906374200471 >100 0.07997700213130317 6.516381981150947 >500 0.006226925194630072 1.8219393294100792 >1k 0.0063134102667768395 5.213350794351024 >5k 7.783656493286514E-4 2.4732034645626357 >10k+ 5.189104328857676E-4 4.84719149002143 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 33935 1.249956720225541 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 30143 1.110282758737542 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 27093 0.9979395143972472 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 17111 0.6302640176743548 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11688 0.4305140458522506 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 10278 0.37857831650149143 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 9637 0.35496781826472784 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8854 0.326126913242285 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8632 0.31794979840833565 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7313 0.2693659494624836 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7050 0.2596786467537959 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6995 0.2576527849706103 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6862 0.2527538828403614 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5628 0.20730091119579622 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5486 0.20207050441011692 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4676 0.17223508542138294 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4362 0.16066925633192308 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4142 0.15256580919918053 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3848 0.14173665712178818 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3504 0.12906581251422708 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3387 0.12475625199363216 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3279 0.12077819612846762 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3196 0.11772098652838747 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3166 0.11661597101028623 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2861 0.10538164657625676 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2839 0.10457130186298248 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2805 0.10331895094246772 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 3.6833850603375304E-5 0.0 0.0 7.366770120675061E-5 0.0 3 3.6833850603375304E-5 0.0 0.0 7.366770120675061E-5 0.0 4 3.6833850603375304E-5 0.0 0.0 1.1050155181012592E-4 0.0 5 3.6833850603375304E-5 3.6833850603375304E-5 0.0 1.1050155181012592E-4 0.0 6 3.6833850603375304E-5 3.6833850603375304E-5 0.0 1.1050155181012592E-4 0.0 7 3.6833850603375304E-5 3.6833850603375304E-5 0.0 1.4733540241350121E-4 0.0 8 3.6833850603375304E-5 3.6833850603375304E-5 0.0 2.2100310362025184E-4 0.0 9 3.6833850603375304E-5 3.6833850603375304E-5 0.0 2.5783695422362715E-4 0.0 10 3.6833850603375304E-5 3.6833850603375304E-5 0.0 5.156739084472543E-4 0.0 11 3.6833850603375304E-5 7.366770120675061E-5 0.0 6.630093108607555E-4 0.0 12 3.6833850603375304E-5 7.366770120675061E-5 0.0 9.208462650843826E-4 0.0 13 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.0010313478168945086 0.0 14 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.0012891847711181358 0.0 15 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.0016575232771518888 0.0 16 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.0024678679904261455 0.0 17 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.004199058968784785 0.0 18 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.00478840057843879 0.0 19 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.0055619114411096715 0.0 20 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.007072099315848059 0.0 21 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.009981973513514708 0.0 22 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.016759402024535765 0.0 23 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.027330717147704478 0.0 24 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.044605793080687496 0.0 25 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.05197256320136256 0.0 26 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.06184403516306714 0.0 27 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.13002349262991483 0.0 28 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.19470373428944188 0.0 29 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.2697342879685174 0.0 30 3.6833850603375304E-5 7.366770120675061E-5 0.0 0.4137546438277148 0.0 31 1.8416925301687653E-4 7.366770120675061E-5 0.0 0.6100422336931018 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7525 0.0 29.919601 1 GTATTGG 925 0.0 21.8 1 ATTGGAC 1035 0.0 19.483091 3 TAATACG 70 1.2199739E-4 18.5 4 TTGGACC 1650 0.0 18.5 4 ACCGTCC 60 9.241235E-4 18.5 8 GTATCAA 13100 0.0 17.723282 2 TGGACCC 1730 0.0 17.644508 5 ACCGACC 140 1.873559E-9 17.178572 8 TATTGGA 1285 0.0 16.988327 2 CGTTTAG 120 1.0427175E-7 16.958332 26 CGAATTA 175 7.2759576E-12 16.914286 15 GGACCCT 1780 0.0 16.733145 6 TGTTACG 90 4.449547E-5 16.444445 16 CGAACGA 70 0.0025937138 15.857142 16 CGTCTGT 735 0.0 15.857142 34 GACCCTC 1765 0.0 15.827195 7 GAACCGT 120 1.9377676E-6 15.416666 6 GCGCTTA 85 5.3674943E-4 15.235294 18 TTTTTAC 1830 0.0 14.860655 1 >>END_MODULE