##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088260_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2553013 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.026571740919454 31.0 30.0 33.0 27.0 34.0 2 30.84607638112301 31.0 31.0 34.0 27.0 34.0 3 30.858951756219025 31.0 31.0 34.0 27.0 34.0 4 35.02326740991918 35.0 35.0 37.0 32.0 37.0 5 34.924787300338856 35.0 35.0 37.0 32.0 37.0 6 35.02387923602426 36.0 35.0 37.0 32.0 37.0 7 34.66599269177243 35.0 35.0 37.0 31.0 37.0 8 34.86807548571041 35.0 35.0 37.0 32.0 37.0 9 36.30372896651917 38.0 35.0 39.0 32.0 39.0 10 36.22573132216718 38.0 35.0 39.0 32.0 39.0 11 36.31310455528428 38.0 35.0 39.0 32.0 39.0 12 36.05715129535181 38.0 35.0 39.0 30.0 39.0 13 36.2236858958415 38.0 35.0 39.0 32.0 39.0 14 37.137148929519746 39.0 36.0 40.0 31.0 41.0 15 37.1754703168374 39.0 36.0 40.0 32.0 41.0 16 37.09540139435248 39.0 36.0 40.0 31.0 41.0 17 37.18233514674622 39.0 36.0 40.0 31.0 41.0 18 37.184272073820225 39.0 36.0 40.0 31.0 41.0 19 37.26335745254725 39.0 36.0 40.0 31.0 41.0 20 37.22418883100086 39.0 36.0 40.0 31.0 41.0 21 37.16148566419364 39.0 36.0 40.0 31.0 41.0 22 37.07808812567738 39.0 36.0 40.0 31.0 41.0 23 36.95382671376918 39.0 36.0 40.0 31.0 41.0 24 36.890501145117554 39.0 35.0 40.0 31.0 41.0 25 36.804212121129034 39.0 35.0 40.0 30.0 41.0 26 36.552950180825555 38.0 35.0 40.0 30.0 41.0 27 36.40454357263359 38.0 35.0 40.0 30.0 41.0 28 36.254275634319136 38.0 35.0 40.0 30.0 41.0 29 36.08763370965992 38.0 35.0 40.0 30.0 41.0 30 35.92608694119458 38.0 34.0 40.0 29.0 41.0 31 35.680486938374386 38.0 34.0 40.0 29.0 41.0 32 35.45482298758369 38.0 34.0 40.0 27.0 41.0 33 35.593306418729554 38.0 34.0 40.0 28.0 41.0 34 35.59827584113359 38.0 34.0 40.0 28.0 41.0 35 35.51494332382953 38.0 34.0 40.0 27.0 41.0 36 35.43311177812256 38.0 34.0 40.0 27.0 41.0 37 35.28285245707718 38.0 34.0 40.0 26.0 41.0 38 35.16262941081773 38.0 34.0 40.0 26.0 41.0 39 35.135515957028026 38.0 34.0 40.0 25.0 41.0 40 34.99215946021427 38.0 33.0 40.0 25.0 41.0 41 34.83809130623307 38.0 33.0 40.0 24.0 41.0 42 34.649307308658436 38.0 33.0 40.0 24.0 41.0 43 34.31695569117744 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 2.0 15 9.0 16 23.0 17 76.0 18 204.0 19 450.0 20 917.0 21 1813.0 22 3344.0 23 5955.0 24 9839.0 25 16146.0 26 24045.0 27 35283.0 28 49379.0 29 66831.0 30 85871.0 31 107199.0 32 130671.0 33 159031.0 34 193034.0 35 229904.0 36 280652.0 37 351054.0 38 412475.0 39 388802.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.666268836077215 24.757962454558594 13.306747752557468 22.269020956806724 2 17.93093102150283 22.863064152043094 36.12394453142229 23.08206029503179 3 19.615685466544825 26.73899427852502 31.977628002677623 21.667692252252536 4 12.949718626579653 15.867095075504903 35.737812537578144 35.4453737603373 5 11.273855636457785 40.353809400892196 34.972912398017556 13.399422564632458 6 31.54680371780324 36.34501665287251 15.540853101805594 16.56732652751866 7 24.60234240875389 34.94733477659534 21.797695507230085 18.652627307420683 8 27.65708596078438 33.66195158426534 20.266915992985542 18.414046461964745 9 25.273353484686524 13.603064300886835 23.39753068237412 37.726051532052516 10 16.123850524850443 27.557713180465594 34.13253281514822 22.18590347953575 11 31.569051939806027 21.80619526810087 25.164540877778528 21.460211914314577 12 20.102404492260714 27.253288565314786 31.935990925232264 20.708316017192235 13 30.912141849649803 20.832248014404943 28.74470282760017 19.51090730834508 14 20.933735942590186 22.30768115947706 28.28783088844436 28.470752009488397 15 22.990795581534446 28.855669751779562 26.833235866797388 21.3202987998886 16 21.92452604040794 28.412624612565622 27.038209362819536 22.624639984206894 17 19.51396252192997 27.085878528624807 27.885639438577087 25.51451951086814 18 20.614583631184015 26.477342653562673 32.07124288047103 20.836830834782276 19 19.979412560766434 24.891804311219722 33.25012446078418 21.87865866722966 20 24.315426517608802 23.843043494098932 32.04930801370772 19.79222197458454 21 23.695766531545274 24.774139418796537 30.831922908343984 20.698171141314205 22 22.069805363309943 24.22122409874137 31.87190977875945 21.83706075918924 23 21.057080398728875 26.321957624187576 32.86085891454528 19.760103062538263 24 19.797157319606285 25.371472844047403 31.236973724771477 23.594396111574834 25 21.103065280121957 26.24001522906464 32.373591517160314 20.283327973653094 26 22.474856179737433 25.332969318996806 30.896160732436538 21.296013768829223 27 20.997033700964312 26.822346772225604 30.587231635718265 21.59338789109182 28 20.770947895682472 26.149103040211703 30.795534531159852 22.284414532945974 29 19.957203508168583 26.089056342447144 31.7271396581216 22.226600491262676 30 19.33632927055209 26.413496523519463 33.40257178478919 20.847602421139257 31 20.762918167670904 25.80413809095371 32.47617618868372 20.956767552691662 32 21.79773467663502 25.9899577479629 30.38096554933328 21.831342026068807 33 22.65397786850282 25.969628826801898 29.95425405197702 21.42213925271826 34 20.90522061579788 28.636908625220475 30.114926951018266 20.342943807963376 35 19.74913562915661 29.594287220629116 30.19820110590898 20.4583760443053 36 20.74697621986257 26.00116019777416 32.25259722531769 20.999266357045578 37 20.8490125197169 26.380985917423843 31.27786658352308 21.492134979336182 38 21.023864743344433 25.997282426685647 31.883151397975645 21.095701431994275 39 21.9174363781148 25.466850345062873 31.87578754984796 20.739925726974363 40 20.34028028842783 26.204175223549587 30.900978569243478 22.554565918779105 41 21.32464660383633 25.778168775482147 30.755581738126676 22.14160288255485 42 18.935900443906867 27.459711329319514 31.231803363320125 22.372584863453497 43 19.690342352349948 27.119760063893132 30.918878987298537 22.27101859645838 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 154.0 1 265.0 2 376.0 3 937.0 4 1498.0 5 1498.0 6 2683.5 7 3869.0 8 4362.0 9 4855.0 10 7406.5 11 9958.0 12 9958.0 13 18531.5 14 27105.0 15 44129.0 16 61153.0 17 59504.5 18 57856.0 19 57856.0 20 61972.5 21 66089.0 22 53742.0 23 41395.0 24 45509.5 25 49624.0 26 49624.0 27 55014.5 28 60405.0 29 63924.0 30 67443.0 31 73247.5 32 79052.0 33 79052.0 34 87037.5 35 95023.0 36 104440.5 37 113858.0 38 119130.0 39 124402.0 40 124402.0 41 132337.0 42 140272.0 43 157931.0 44 175590.0 45 216421.0 46 257252.0 47 257252.0 48 260267.5 49 263283.0 50 238940.5 51 214598.0 52 200059.5 53 185521.0 54 185521.0 55 160659.0 56 135797.0 57 111755.5 58 87714.0 59 77461.0 60 67208.0 61 67208.0 62 58519.5 63 49831.0 64 43646.5 65 37462.0 66 32005.0 67 26548.0 68 26548.0 69 22450.0 70 18352.0 71 15382.0 72 12412.0 73 9940.5 74 7469.0 75 7469.0 76 5864.0 77 4259.0 78 3324.5 79 2390.0 80 1877.0 81 1364.0 82 1364.0 83 1010.5 84 657.0 85 538.0 86 419.0 87 341.0 88 263.0 89 263.0 90 225.0 91 187.0 92 110.0 93 33.0 94 21.0 95 9.0 96 9.0 97 8.0 98 7.0 99 4.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2553013.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.404736605935234 #Duplication Level Percentage of deduplicated Percentage of total 1 74.5625529022692 32.363679693891065 2 13.630331228441179 11.832418736442861 3 4.89047424272851 6.368092391512247 4 2.2661632870576605 3.9344888232311264 5 1.218709037837062 2.6448872393295217 6 0.6903366591634722 1.7978328516247082 7 0.45664376223390307 1.3874351555754114 8 0.3257086383299697 1.1309838125592127 9 0.247374482203364 0.9663501818759965 >10 1.4614641570941207 12.256258138226864 >50 0.15407260433555378 4.673633663634208 >100 0.08373067538343096 6.6825874231808635 >500 0.0050302041231117915 1.5257624762593025 >1k 0.0059447866909502515 4.824402595025157 >5k 0.0010060408246223502 3.2026125545647126 >10k+ 4.572912839192501E-4 4.408574263066887 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 30032 1.1763355689924024 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 27584 1.0804488657127873 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25276 0.9900458791239998 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 17566 0.6880497670791336 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 10597 0.41507818409071945 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9676 0.37900316214606034 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9404 0.3683490840038809 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 9368 0.3669389854262395 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 9207 0.3606327112317877 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7452 0.29189040557176954 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6966 0.2728540747736106 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6417 0.2513500714645793 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6379 0.24986163407706893 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5517 0.21609760702354436 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5257 0.20591356174057868 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5033 0.1971396150352544 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4360 0.17077860551434715 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3723 0.1458276945710813 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3705 0.14512264528226063 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3582 0.14030480847531918 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3567 0.13971726740130191 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3305 0.12945488330846727 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3031 0.11872246635641887 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2951 0.11558891396166021 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2791 0.10932180917214288 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2598 0.10176211401978759 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 7.833880986896659E-5 0.0 5 0.0 0.0 0.0 7.833880986896659E-5 0.0 6 3.9169404934483294E-5 0.0 0.0 7.833880986896659E-5 0.0 7 3.9169404934483294E-5 0.0 0.0 7.833880986896659E-5 0.0 8 3.9169404934483294E-5 0.0 0.0 7.833880986896659E-5 0.0 9 3.9169404934483294E-5 0.0 0.0 1.1750821480344989E-4 0.0 10 3.9169404934483294E-5 0.0 0.0 1.9584702467241648E-4 0.0 11 3.9169404934483294E-5 0.0 0.0 2.741858345413831E-4 0.0 12 3.9169404934483294E-5 0.0 0.0 6.267104789517327E-4 0.0 13 3.9169404934483294E-5 0.0 0.0 7.050492888206993E-4 0.0 14 3.9169404934483294E-5 0.0 0.0 9.792351233620824E-4 0.0 15 3.9169404934483294E-5 0.0 0.0 0.0012534209579034654 0.0 16 3.9169404934483294E-5 0.0 0.0 0.002154317271396581 0.0 17 3.9169404934483294E-5 0.0 0.0 0.0032510606095621135 0.0 18 3.9169404934483294E-5 0.0 0.0 0.00344690763423453 0.0 19 3.9169404934483294E-5 0.0 0.0 0.0041911263279897125 0.0 20 3.9169404934483294E-5 0.0 0.0 0.005248700261220761 0.0 21 3.9169404934483294E-5 0.0 0.0 0.007559695152355276 0.0 22 3.9169404934483294E-5 0.0 0.0 0.012651717793838104 0.0 23 3.9169404934483294E-5 0.0 0.0 0.02318828772121411 0.0 24 3.9169404934483294E-5 0.0 0.0 0.03920857433941778 0.0 25 3.9169404934483294E-5 0.0 0.0 0.04508398507959027 0.0 26 3.9169404934483294E-5 0.0 0.0 0.05307454368622486 0.0 27 3.9169404934483294E-5 0.0 0.0 0.10595324034777731 0.0 28 3.9169404934483294E-5 0.0 0.0 0.16086874606592289 0.0 29 3.9169404934483294E-5 0.0 0.0 0.2276525814792169 0.0 30 3.9169404934483294E-5 0.0 0.0 0.3473934523639323 0.0 31 3.9169404934483294E-5 0.0 0.0 0.511082395585138 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6790 0.0 30.542707 1 GTATTGG 870 0.0 23.178162 1 ATTGGAC 905 0.0 22.077349 3 CGAACGA 65 6.9063535E-5 19.923077 16 TTGGACC 1625 0.0 18.784615 4 GGACCCT 1645 0.0 18.218845 6 TATTGGA 1140 0.0 18.175438 2 GTATCAA 11845 0.0 18.054874 2 ACGTTTA 150 2.5283953E-10 17.266666 26 TGGACCC 1720 0.0 17.209303 5 TATACGG 120 1.0426447E-7 16.958332 2 CGTCTGT 645 0.0 16.922482 34 TACCCCG 125 1.6599188E-7 16.279999 5 CAATGCG 125 1.6599188E-7 16.279999 19 AGTGCGC 150 4.6784407E-9 16.033333 8 GACCCTC 1830 0.0 15.972678 7 TAGTGCG 95 7.0650756E-5 15.578948 7 GTATACG 170 1.4879333E-9 15.235294 1 ACGAACG 85 5.367337E-4 15.235294 15 ACCCTCG 1980 0.0 14.669192 8 >>END_MODULE