##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088253_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 742000 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.86839757412399 31.0 30.0 33.0 27.0 34.0 2 30.800390835579513 31.0 31.0 34.0 27.0 34.0 3 30.822082210242588 31.0 31.0 34.0 27.0 34.0 4 35.02087331536388 35.0 35.0 37.0 32.0 37.0 5 34.92242452830189 35.0 35.0 37.0 32.0 37.0 6 35.02515902964959 36.0 35.0 37.0 32.0 37.0 7 34.63360646900269 35.0 35.0 37.0 30.0 37.0 8 34.85983018867925 35.0 35.0 37.0 32.0 37.0 9 36.33449191374663 38.0 35.0 39.0 32.0 39.0 10 36.233854447439356 38.0 35.0 39.0 32.0 39.0 11 36.33301886792453 38.0 35.0 39.0 32.0 39.0 12 36.06793396226415 38.0 35.0 39.0 31.0 39.0 13 36.23869002695418 38.0 35.0 39.0 32.0 39.0 14 37.18797574123989 39.0 36.0 40.0 32.0 41.0 15 37.25016037735849 39.0 36.0 40.0 32.0 41.0 16 37.17138409703504 39.0 36.0 40.0 31.0 41.0 17 37.221785714285716 39.0 36.0 40.0 32.0 41.0 18 37.209579514824796 39.0 36.0 40.0 32.0 41.0 19 37.290587601078165 39.0 36.0 40.0 31.0 41.0 20 37.24976684636118 39.0 36.0 40.0 31.0 41.0 21 37.18065229110512 39.0 36.0 40.0 31.0 41.0 22 37.10278436657682 39.0 36.0 40.0 31.0 41.0 23 36.99353504043127 39.0 36.0 40.0 31.0 41.0 24 36.91909703504043 39.0 36.0 40.0 31.0 41.0 25 36.842367924528304 39.0 35.0 40.0 31.0 41.0 26 36.60951886792453 38.0 35.0 40.0 30.0 41.0 27 36.465304582210244 38.0 35.0 40.0 30.0 41.0 28 36.32788005390836 38.0 35.0 40.0 30.0 41.0 29 36.18880053908356 38.0 35.0 40.0 30.0 41.0 30 36.04756873315364 38.0 35.0 40.0 29.0 41.0 31 35.84586118598383 38.0 34.0 40.0 29.0 41.0 32 35.597633423180596 38.0 34.0 40.0 27.0 41.0 33 35.766070080862534 38.0 34.0 40.0 29.0 41.0 34 35.79097169811321 38.0 34.0 40.0 29.0 41.0 35 35.737962264150944 38.0 34.0 40.0 29.0 41.0 36 35.66795687331536 38.0 34.0 40.0 28.0 41.0 37 35.52771563342318 38.0 34.0 40.0 27.0 41.0 38 35.42619811320755 38.0 34.0 40.0 27.0 41.0 39 35.43462398921833 38.0 34.0 40.0 27.0 41.0 40 35.3369474393531 38.0 34.0 40.0 26.0 41.0 41 35.20419272237197 38.0 34.0 40.0 25.0 41.0 42 35.08312129380054 38.0 34.0 40.0 25.0 41.0 43 34.74701347708895 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 1.0 15 1.0 16 7.0 17 15.0 18 61.0 19 105.0 20 240.0 21 464.0 22 906.0 23 1573.0 24 2604.0 25 4151.0 26 6601.0 27 9458.0 28 13572.0 29 18234.0 30 23987.0 31 30125.0 32 37309.0 33 46057.0 34 55546.0 35 67618.0 36 81749.0 37 101725.0 38 122632.0 39 117258.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.712533692722374 25.26253369272237 13.245956873315365 22.778975741239893 2 17.873180592991915 23.458760107816712 35.5622641509434 23.105795148247978 3 19.408221024258758 26.572776280323453 31.93086253369272 22.088140161725068 4 13.62911051212938 17.048921832884098 36.26469002695418 33.057277628032345 5 12.025202156334231 39.715094339622645 35.08719676549865 13.172506738544474 6 31.407816711590296 37.233288409703505 16.020080862533693 15.338814016172506 7 24.537735849056606 34.50714285714286 22.80377358490566 18.15134770889488 8 26.169946091644203 34.76469002695418 20.83032345013477 18.235040431266846 9 25.153773584905657 14.325606469002693 23.3222371967655 37.19838274932615 10 15.997304582210242 28.352964959568734 34.67601078167116 20.973719676549866 11 31.813342318059302 23.189757412398922 24.21711590296496 20.77978436657682 12 19.5222371967655 27.943261455525608 31.92964959568733 20.604851752021563 13 29.36199460916442 22.044743935309974 27.83342318059299 20.759838274932616 14 20.595283018867924 23.46563342318059 28.340431266846362 27.598652291105118 15 23.093261455525607 29.93423180592992 25.69770889487871 21.27479784366577 16 21.823180592991914 28.857142857142858 27.218059299191378 22.101617250673854 17 19.973180592991913 28.52291105121294 28.311320754716977 23.19258760107817 18 20.24622641509434 27.81765498652291 30.991509433962268 20.944609164420484 19 20.410512129380052 27.01024258760108 32.03086253369272 20.548382749326148 20 22.712264150943394 26.338409703504045 30.970080862533695 19.97924528301887 21 22.250404312668465 26.80754716981132 30.173584905660377 20.76846361185984 22 21.639353099730457 26.691105121293802 30.786388140161726 20.88315363881402 23 21.08679245283019 27.666307277628032 30.838140161725068 20.40876010781671 24 20.306738544474392 27.506469002695415 30.223045822102424 21.963746630727762 25 21.11967654986523 27.666172506738544 30.868867924528303 20.345283018867924 26 21.432614555256066 27.440296495956872 30.005795148247977 21.121293800539085 27 20.931940700808628 27.97749326145553 29.993261455525605 21.097304582210246 28 20.765094339622642 27.969946091644204 29.996900269541776 21.268059299191375 29 20.114016172506737 27.68315363881402 30.740026954177896 21.462803234501347 30 19.97479784366577 28.067520215633422 31.58787061994609 20.369811320754717 31 20.855929919137466 27.664150943396226 30.712803234501347 20.767115902964957 32 20.999056603773585 28.16603773584906 29.971832884097033 20.863072776280323 33 21.63598382749326 27.85876010781671 29.571698113207546 20.933557951482477 34 20.709838274932615 28.767789757412398 29.87021563342318 20.652156334231805 35 20.189622641509434 29.058625336927225 30.015498652291107 20.736253369272237 36 20.518598382749325 27.519407008086255 31.014690026954177 20.947304582210243 37 20.45943396226415 27.35431266846361 30.86091644204852 21.32533692722372 38 20.57722371967655 27.31320754716981 31.00902964959569 21.10053908355795 39 21.159703504043126 26.802695417789757 31.18935309973046 20.848247978436657 40 20.151212938005393 27.08301886792453 31.010242587601077 21.755525606469003 41 20.415363881401618 26.542991913746633 31.091239892183285 21.950404312668464 42 18.978706199460916 27.62708894878706 31.186927223719678 22.207277628032347 43 19.3811320754717 26.994609164420485 31.269272237196766 22.35498652291105 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 163.0 1 165.5 2 168.0 3 344.0 4 520.0 5 520.0 6 848.5 7 1177.0 8 1337.5 9 1498.0 10 2207.0 11 2916.0 12 2916.0 13 4968.0 14 7020.0 15 10655.0 16 14290.0 17 14078.5 18 13867.0 19 13867.0 20 15691.0 21 17515.0 22 15617.0 23 13719.0 24 15799.0 25 17879.0 26 17879.0 27 20272.0 28 22665.0 29 24079.0 30 25493.0 31 28041.5 32 30590.0 33 30590.0 34 32877.5 35 35165.0 36 38197.0 37 41229.0 38 42628.0 39 44027.0 40 44027.0 41 45059.5 42 46092.0 43 48797.0 44 51502.0 45 56908.5 46 62315.0 47 62315.0 48 62268.0 49 62221.0 50 56849.5 51 51478.0 52 47588.0 53 43698.0 54 43698.0 55 39533.5 56 35369.0 57 31430.0 58 27491.0 59 24360.5 60 21230.0 61 21230.0 62 18613.0 63 15996.0 64 13702.5 65 11409.0 66 9858.0 67 8307.0 68 8307.0 69 7023.5 70 5740.0 71 4775.0 72 3810.0 73 3075.5 74 2341.0 75 2341.0 76 1843.0 77 1345.0 78 1059.5 79 774.0 80 628.0 81 482.0 82 482.0 83 377.0 84 272.0 85 199.0 86 126.0 87 88.5 88 51.0 89 51.0 90 45.0 91 39.0 92 22.5 93 6.0 94 4.0 95 2.0 96 2.0 97 1.5 98 1.0 99 1.5 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 742000.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.775523871836256 #Duplication Level Percentage of deduplicated Percentage of total 1 81.83503345429563 50.554020627083574 2 11.130444473007836 13.75178076492887 3 3.2337477574909133 5.992993853651306 4 1.3163800573358335 3.252802706254358 5 0.6538502374217973 2.0195970475228022 6 0.3954053656662837 1.465582416346179 7 0.25284939393575856 1.093393263974045 8 0.1833956013455639 0.9063487479130118 9 0.13177755875145936 0.7326564953780774 >10 0.7681146592295838 8.969780047761649 >50 0.05843094807767011 2.5105067951951847 >100 0.03594016538712445 4.092701030384278 >500 0.0026459017454472863 1.193471774944472 >1k 0.0015434426848442504 1.8502762600828244 >5k 4.409836242412144E-4 1.6140881685793191 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 6325 0.8524258760107817 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5525 0.7446091644204852 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4660 0.628032345013477 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2246 0.3026954177897574 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1908 0.2571428571428571 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 1435 0.19339622641509432 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1279 0.17237196765498652 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1039 0.1400269541778976 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1017 0.13706199460916443 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 954 0.12857142857142856 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 901 0.12142857142857141 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 901 0.12142857142857141 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 838 0.11293800539083558 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 779 0.1049865229110512 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 758 0.10215633423180594 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 1.3477088948787063E-4 0.0 0.0 0.0 3 0.0 1.3477088948787063E-4 0.0 0.0 0.0 4 0.0 1.3477088948787063E-4 0.0 0.0 0.0 5 0.0 1.3477088948787063E-4 0.0 0.0 0.0 6 0.0 1.3477088948787063E-4 0.0 0.0 0.0 7 0.0 1.3477088948787063E-4 0.0 0.0 0.0 8 0.0 1.3477088948787063E-4 0.0 0.0 0.0 9 0.0 1.3477088948787063E-4 0.0 0.0 0.0 10 0.0 1.3477088948787063E-4 0.0 0.0 0.0 11 0.0 1.3477088948787063E-4 0.0 1.3477088948787063E-4 0.0 12 0.0 1.3477088948787063E-4 0.0 2.6954177897574127E-4 0.0 13 0.0 1.3477088948787063E-4 0.0 2.6954177897574127E-4 0.0 14 0.0 1.3477088948787063E-4 0.0 5.390835579514825E-4 0.0 15 0.0 1.3477088948787063E-4 0.0 8.086253369272237E-4 0.0 16 0.0 1.3477088948787063E-4 0.0 0.0012129380053908356 0.0 17 0.0 1.3477088948787063E-4 0.0 0.001752021563342318 0.0 18 0.0 1.3477088948787063E-4 0.0 0.0018867924528301887 0.0 19 0.0 1.3477088948787063E-4 0.0 0.002830188679245283 0.0 20 0.0 1.3477088948787063E-4 0.0 0.004043126684636119 0.0 21 0.0 1.3477088948787063E-4 0.0 0.005795148247978436 0.0 22 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.008490566037735849 0.0 23 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.012264150943396227 0.0 24 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.022371967654986523 0.0 25 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.029649595687331536 0.0 26 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.042048517520215635 0.0 27 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.11738544474393531 0.0 28 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.18436657681940702 0.0 29 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.2586253369272237 0.0 30 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.39002695417789757 0.0 31 1.3477088948787063E-4 1.3477088948787063E-4 0.0 0.5855795148247979 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GTATACT 55 1.853914E-8 30.272728 4 GCGTCCA 25 0.005495103 29.6 9 GGTATCA 1695 0.0 26.849558 1 CGAATTA 45 0.0038245486 20.555557 15 CGGACCA 55 5.140733E-4 20.181818 9 CGTCTGT 130 3.274181E-11 19.923077 34 CGTATAC 50 0.007032589 18.5 3 CTGTGCG 90 2.1501237E-6 18.5 9 TAGTACG 50 0.007032589 18.5 4 GTATCAA 2805 0.0 16.818182 2 ATTGGAC 110 7.798426E-7 16.818182 3 ATAACAC 105 9.334099E-6 15.857142 3 TGTACTG 130 2.5851477E-7 15.653846 5 TACACTG 130 2.5851477E-7 15.653846 5 CCTAGTA 110 1.4504105E-5 15.136364 2 GTACTGT 135 3.9663246E-7 15.074075 6 TTCGTTT 75 0.0041025826 14.8 10 GTAGGAC 75 0.0041025826 14.8 3 AGTATAC 90 8.2691404E-4 14.388889 3 CACTGTG 240 5.456968E-12 13.874999 7 >>END_MODULE