##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088251_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1570684 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.054555212888143 31.0 31.0 33.0 27.0 34.0 2 30.899096189940177 31.0 31.0 34.0 27.0 34.0 3 30.88911200470623 31.0 31.0 34.0 27.0 34.0 4 35.06624375113008 35.0 35.0 37.0 32.0 37.0 5 34.98595261682171 35.0 35.0 37.0 32.0 37.0 6 35.10306656208378 36.0 35.0 37.0 32.0 37.0 7 34.725871658462175 36.0 35.0 37.0 31.0 37.0 8 34.94947742512179 36.0 35.0 37.0 32.0 37.0 9 36.40601801508133 38.0 35.0 39.0 32.0 39.0 10 36.33022555778247 38.0 35.0 39.0 32.0 39.0 11 36.415589004535605 38.0 35.0 39.0 32.0 39.0 12 36.161078230885394 38.0 35.0 39.0 31.0 39.0 13 36.32448984009514 38.0 35.0 39.0 32.0 39.0 14 37.26709000664678 39.0 36.0 41.0 32.0 41.0 15 37.30993248801159 39.0 36.0 41.0 32.0 41.0 16 37.237861976056294 39.0 36.0 40.0 32.0 41.0 17 37.311396818201494 39.0 36.0 40.0 32.0 41.0 18 37.30583618347166 39.0 36.0 40.0 32.0 41.0 19 37.379825604641034 39.0 36.0 41.0 32.0 41.0 20 37.34020082970222 39.0 36.0 40.0 32.0 41.0 21 37.2761128272778 39.0 36.0 40.0 31.0 41.0 22 37.19334379162199 39.0 36.0 40.0 31.0 41.0 23 37.066805289924645 39.0 36.0 40.0 31.0 41.0 24 36.99755011192576 39.0 36.0 40.0 31.0 41.0 25 36.90980490028548 39.0 35.0 40.0 31.0 41.0 26 36.66208161539813 38.0 35.0 40.0 30.0 41.0 27 36.5307579373063 38.0 35.0 40.0 30.0 41.0 28 36.3635276096274 38.0 35.0 40.0 30.0 41.0 29 36.20759681769216 38.0 35.0 40.0 30.0 41.0 30 36.05443997646885 38.0 35.0 40.0 30.0 41.0 31 35.804848715591426 38.0 34.0 40.0 29.0 41.0 32 35.58510241398015 38.0 34.0 40.0 28.0 41.0 33 35.71055476467577 38.0 34.0 40.0 29.0 41.0 34 35.71055349134517 38.0 34.0 40.0 29.0 41.0 35 35.62050036799254 38.0 34.0 40.0 28.0 41.0 36 35.53739453639306 38.0 34.0 40.0 27.0 41.0 37 35.380152213939915 38.0 34.0 40.0 27.0 41.0 38 35.25201822900087 38.0 34.0 40.0 26.0 41.0 39 35.22992721642291 38.0 34.0 40.0 26.0 41.0 40 35.079860748565594 38.0 34.0 40.0 25.0 41.0 41 34.91896587728658 38.0 33.0 40.0 24.0 41.0 42 34.74284515535906 38.0 33.0 40.0 24.0 41.0 43 34.39694426122632 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 11.0 16 12.0 17 44.0 18 121.0 19 237.0 20 513.0 21 1085.0 22 2039.0 23 3465.0 24 5732.0 25 9162.0 26 13947.0 27 20407.0 28 28908.0 29 39193.0 30 50853.0 31 63300.0 32 78311.0 33 95693.0 34 116232.0 35 140585.0 36 172992.0 37 217214.0 38 259775.0 39 250852.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.694235123041935 24.819760053581753 13.228122270297526 22.257882553078787 2 17.993307374366836 22.835146980551148 36.06568857898852 23.1058570660935 3 19.722617662114086 26.621522852464274 31.910556165339433 21.745303320082208 4 13.123199828864369 15.79649375686007 35.56565165240112 35.51465476187444 5 11.349895968889987 40.26010324164504 34.81508693028005 13.574913859184914 6 31.7438771898103 36.002149382052664 15.49280440877987 16.761169019357173 7 24.66606905017177 35.03734678649557 21.681636790086355 18.614947373246306 8 27.55385551772349 33.75440254054921 20.275561475128036 18.416180466599265 9 25.290319376781074 13.652077693539885 23.536115475805445 37.5214874538736 10 16.23865780768124 27.614020388569564 33.87218562104153 22.275136182707662 11 31.693898963763555 21.601162296171605 25.127269393461702 21.577669346603138 12 20.110792495498778 27.14524372821013 31.864206931502455 20.87975684478864 13 30.805177871551503 20.926424411275597 28.723600673337224 19.54479704383568 14 20.914964435876342 22.547628931089893 28.21993475454006 28.3174718784937 15 23.082555116115017 28.837945761209767 26.718932643357924 21.360566479317292 16 22.058797313781767 28.333133844872684 26.94991481418287 22.658154027162688 17 19.580131967983373 26.965640447091836 27.924840388009297 25.529387196915483 18 20.740836476337698 26.533535708010014 31.86267893478255 20.862948880869737 19 20.056612278472308 24.951931769853132 33.10850559374133 21.882950357933233 20 24.374349009730793 23.94370860083887 31.877958901981557 19.803983487448782 21 23.68496782293574 24.89921588301657 30.623091595763373 20.792724698284314 22 22.135260816306783 24.356522381331956 31.61546179880867 21.89275500355259 23 21.102398700184125 26.30357220166501 32.618591645423265 19.9754374527276 24 19.912152921911726 25.486666955288268 31.073150296304032 23.52802982649597 25 21.01288355900996 26.370995056930614 32.25722042116683 20.3589009628926 26 22.454739463825952 25.42440108895233 30.800148215681833 21.32071123153989 27 21.080179081215572 26.825192081920996 30.35932116199057 21.735307674872857 28 20.790560036264456 26.302489870655076 30.652123533441483 22.254826559638985 29 19.908205597051985 26.183560792622835 31.552941266352747 22.355292343972437 30 19.203098777347957 26.494826457772536 33.38812899348309 20.91394577139641 31 20.740199811037737 25.959008941327472 32.23048047856857 21.070310769066218 32 21.721237371743776 26.033053115712647 30.34569652457146 21.90001298797212 33 22.61549745206547 25.99548986301509 29.89792981911065 21.49108286580878 34 20.97971329688212 28.599769272495294 29.86641488676271 20.554102543859873 35 19.74630161127254 29.55317555918313 30.027618540712197 20.67290428883213 36 20.672776955772136 26.001983849074673 32.196164218900805 21.129074976252387 37 20.799473350463874 26.30204420494511 31.219583315294486 21.678899129296536 38 20.951445357563966 25.875924119682892 31.900560520130085 21.27207000262306 39 21.970491836677525 25.118483412322274 31.8726745799919 21.0383501710083 40 20.29065044273705 26.09270865431876 31.021453073947402 22.595187828996792 41 21.196115832338013 25.539828507834805 30.937667920472865 22.32638773935432 42 18.864074505120062 27.177458992388033 31.33386473663703 22.624601765854877 43 19.49144449169916 26.972834764981375 30.99044747383942 22.54527326948005 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 87.0 1 148.0 2 209.0 3 626.0 4 1043.0 5 1043.0 6 1825.5 7 2608.0 8 2953.5 9 3299.0 10 4938.0 11 6577.0 12 6577.0 13 11836.0 14 17095.0 15 27427.5 16 37760.0 17 36682.0 18 35604.0 19 35604.0 20 38272.5 21 40941.0 22 33812.0 23 26683.0 24 29304.0 25 31925.0 26 31925.0 27 35209.5 28 38494.0 29 40366.5 30 42239.0 31 45270.0 32 48301.0 33 48301.0 34 53014.5 35 57728.0 36 63060.0 37 68392.0 38 71840.5 39 75289.0 40 75289.0 41 77851.0 42 80413.0 43 92337.0 44 104261.0 45 129648.0 46 155035.0 47 155035.0 48 157747.0 49 160459.0 50 145320.5 51 130182.0 52 122003.0 53 113824.0 54 113824.0 55 98998.5 56 84173.0 57 70086.0 58 55999.0 59 49485.5 60 42972.0 61 42972.0 62 38212.0 63 33452.0 64 29240.5 65 25029.0 66 21401.0 67 17773.0 68 17773.0 69 15131.5 70 12490.0 71 10554.5 72 8619.0 73 6875.0 74 5131.0 75 5131.0 76 3945.5 77 2760.0 78 2221.5 79 1683.0 80 1351.5 81 1020.0 82 1020.0 83 760.5 84 501.0 85 385.5 86 270.0 87 237.0 88 204.0 89 204.0 90 167.0 91 130.0 92 74.5 93 19.0 94 13.0 95 7.0 96 7.0 97 5.5 98 4.0 99 2.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1570684.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.96744347589209 #Duplication Level Percentage of deduplicated Percentage of total 1 78.70848114260185 38.54153101423675 2 12.164020072908627 11.912819307195399 3 3.894260849662781 5.720759941087252 4 1.644374623310836 3.220832856806589 5 0.8803781854997124 2.1554934517932804 6 0.49725898712986116 1.46097008070965 7 0.36192265800029294 1.240569910879178 8 0.25104217322631156 0.9834314742019616 9 0.18891876176984737 0.8325781909650473 >10 1.2133522200784261 11.385342534744233 >50 0.11907119324239696 4.004979961662576 >100 0.06414324179367017 5.898485926165485 >500 0.006453800494777642 2.3245332837217716 >1k 0.0051366983529862855 4.681959081030416 >5k 7.902612850748131E-4 2.4605535016721967 >10k+ 3.951306425374066E-4 3.175159483128198 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17901 1.139694553455692 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16350 1.0409477654321302 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 14980 0.9537246193378172 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9931 0.6322723093887759 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6389 0.40676546014347886 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5564 0.3542405728969035 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5520 0.35143924557708617 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5509 0.35073891374713184 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5238 0.3334852841182568 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4122 0.2624334366428894 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4095 0.26071444033300145 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3962 0.25224679184355353 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3938 0.25071879512365314 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3236 0.20602489106656718 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3205 0.20405122863669586 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2882 0.18348693944803665 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2536 0.16145832006947292 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2232 0.14210369495073485 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2213 0.1408940308808137 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2085 0.13274471504134505 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2025 0.12892472324159412 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1930 0.12287640289198845 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1909 0.12153940576207563 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1823 0.11606408418243262 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1705 0.10855143364292244 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1629 0.10371277736323792 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 1.273330599916979E-4 0.0 6 0.0 0.0 0.0 1.273330599916979E-4 0.0 7 0.0 0.0 0.0 1.273330599916979E-4 0.0 8 0.0 0.0 0.0 1.9099958998754682E-4 0.0 9 0.0 0.0 0.0 3.183326499792447E-4 0.0 10 0.0 0.0 0.0 3.8199917997509364E-4 0.0 11 0.0 0.0 0.0 5.093322399667916E-4 0.0 12 0.0 6.366652999584895E-5 0.0 7.003318299543383E-4 0.0 13 0.0 6.366652999584895E-5 0.0 7.639983599501873E-4 0.0 14 0.0 6.366652999584895E-5 0.0 8.913314199418852E-4 0.0 15 0.0 6.366652999584895E-5 0.0 0.0013369971299128278 0.0 16 0.0 6.366652999584895E-5 0.0 0.002610327729829807 0.0 17 0.0 6.366652999584895E-5 0.0 0.004329324039717728 0.0 18 0.0 6.366652999584895E-5 0.0 0.005029655869672066 0.0 19 0.0 6.366652999584895E-5 0.0 0.0059846538196098005 0.0 20 0.0 6.366652999584895E-5 0.0 0.0074489840095143265 0.0 21 0.0 6.366652999584895E-5 0.0 0.011268975809265263 0.0 22 0.0 1.273330599916979E-4 0.0 0.017699295338846007 0.0 23 0.0 1.273330599916979E-4 0.0 0.03068726745799919 0.0 24 0.0 1.273330599916979E-4 0.0 0.05118789011666255 0.0 25 0.0 1.273330599916979E-4 0.0 0.05831854147619763 0.0 26 0.0 1.273330599916979E-4 0.0 0.06971485034545459 0.0 27 0.0 1.273330599916979E-4 0.0 0.14337702555065182 0.0 28 0.0 1.273330599916979E-4 0.0 0.21277354324612716 0.0 29 0.0 1.273330599916979E-4 0.0 0.29808669344056477 0.0 30 0.0 1.273330599916979E-4 0.0 0.4521596960305192 0.0 31 0.0 1.273330599916979E-4 0.0 0.6635962421467335 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4040 0.0 29.12376 1 TAGGTCG 55 1.9032343E-5 23.545454 21 GTACGAC 45 0.003826423 20.555555 3 TGCGGTC 55 5.1442464E-4 20.181818 12 ATTGGAC 515 0.0 20.116507 3 GTATTGG 535 0.0 20.056074 1 TGCGCGC 75 9.269319E-6 19.733334 19 CATTGCG 70 1.2195582E-4 18.5 29 CTAGCGG 60 9.2388707E-4 18.5 29 CGTCTGT 375 0.0 17.759998 34 GTATCAA 6955 0.0 17.635515 2 ATCACGT 95 3.6080892E-6 17.526316 23 TTGCGCG 85 2.7241444E-5 17.411764 18 TTGGACC 985 0.0 17.279188 4 TATTGGA 695 0.0 17.03597 2 TGCGTTA 100 5.8805526E-6 16.65 37 TTGGACT 245 0.0 15.857142 4 ACGTTTA 105 9.347381E-6 15.857142 26 AATGCGT 105 9.347381E-6 15.857142 35 TTACCGC 105 9.347381E-6 15.857142 16 >>END_MODULE