##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088249_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1413831 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.041177481608482 31.0 31.0 33.0 27.0 34.0 2 30.887577086653213 31.0 31.0 34.0 27.0 34.0 3 30.89935289295538 31.0 31.0 34.0 27.0 34.0 4 35.07967005957572 35.0 35.0 37.0 32.0 37.0 5 34.99613532310439 35.0 35.0 37.0 32.0 37.0 6 35.099004760823604 36.0 35.0 37.0 32.0 37.0 7 34.7209355290696 35.0 35.0 37.0 31.0 37.0 8 34.94050420453364 36.0 35.0 37.0 32.0 37.0 9 36.397237717945075 38.0 35.0 39.0 32.0 39.0 10 36.33249447776998 38.0 35.0 39.0 32.0 39.0 11 36.41098830058189 38.0 35.0 39.0 32.0 39.0 12 36.15706403382017 38.0 35.0 39.0 31.0 39.0 13 36.325646417428956 38.0 35.0 39.0 32.0 39.0 14 37.26562085567511 39.0 36.0 40.0 32.0 41.0 15 37.30110388016672 39.0 36.0 41.0 32.0 41.0 16 37.221604986734626 39.0 36.0 40.0 32.0 41.0 17 37.306952528272475 39.0 36.0 40.0 32.0 41.0 18 37.30912817727154 39.0 36.0 40.0 32.0 41.0 19 37.37977452750718 39.0 36.0 40.0 32.0 41.0 20 37.34131589984942 39.0 36.0 40.0 32.0 41.0 21 37.29107368561023 39.0 36.0 40.0 31.0 41.0 22 37.21190934418612 39.0 36.0 40.0 31.0 41.0 23 37.0948352384408 39.0 36.0 40.0 31.0 41.0 24 37.02736182754516 39.0 36.0 40.0 31.0 41.0 25 36.94096748479839 39.0 36.0 40.0 31.0 41.0 26 36.70803441146785 38.0 35.0 40.0 30.0 41.0 27 36.56725662402366 38.0 35.0 40.0 30.0 41.0 28 36.401111589716166 38.0 35.0 40.0 30.0 41.0 29 36.24078125320494 38.0 35.0 40.0 30.0 41.0 30 36.08891303133119 38.0 35.0 40.0 30.0 41.0 31 35.857351409043936 38.0 34.0 40.0 29.0 41.0 32 35.6633699501567 38.0 34.0 40.0 29.0 41.0 33 35.7825305853387 38.0 34.0 40.0 29.0 41.0 34 35.78216844870426 38.0 34.0 40.0 29.0 41.0 35 35.67443421455605 38.0 34.0 40.0 28.0 41.0 36 35.596057803231076 38.0 34.0 40.0 27.0 41.0 37 35.44635745007713 38.0 34.0 40.0 27.0 41.0 38 35.32334769855803 38.0 34.0 40.0 27.0 41.0 39 35.29674055810065 38.0 34.0 40.0 26.0 41.0 40 35.14140869736199 38.0 34.0 40.0 25.0 41.0 41 34.9966813572485 38.0 34.0 40.0 25.0 41.0 42 34.81326481029203 38.0 33.0 40.0 24.0 41.0 43 34.485104655365454 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 2.0 15 7.0 16 11.0 17 27.0 18 102.0 19 209.0 20 441.0 21 950.0 22 1688.0 23 2929.0 24 5059.0 25 8079.0 26 12364.0 27 17998.0 28 25745.0 29 34524.0 30 45378.0 31 56405.0 32 70309.0 33 86244.0 34 105158.0 35 126651.0 36 155198.0 37 195211.0 38 232586.0 39 230556.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.44177203640322 24.820081042217918 13.370622089910322 22.36752483146854 2 17.93524119926639 22.801310764865107 36.25242338016354 23.011024655704958 3 19.730929651422272 26.35944465781271 32.058004103743656 21.851621587021363 4 13.067757037439412 15.812851748193385 35.44115244325524 35.678238771111964 5 11.43156431002008 40.10422745009835 34.96047264489179 13.503735594989783 6 31.816956906447803 35.835824790940364 15.404104168037055 16.94311413457478 7 24.634981125749825 34.96832365395864 21.433042563078615 18.963652657212922 8 27.491475289479432 33.79336002676416 20.301365580468953 18.413799103287452 9 25.182217676653007 13.718400572628553 23.529969282042902 37.56941246867554 10 16.27330282049269 27.62239617040509 33.945570580925164 22.15873042817706 11 31.623298682798723 21.546493180585234 25.22628234916337 21.603925787452674 12 20.177800599930258 27.087537336499203 31.742336955406973 20.992325108163566 13 31.151389381050492 20.86161641667215 28.604833250933105 19.382160951344254 14 21.02889242066414 22.42382576135337 27.958999342920055 28.58828247506244 15 23.13883342492844 28.861582466362666 26.564207461853645 21.435376646855246 16 22.114312106609628 28.362371457408987 26.8009401406533 22.722376295328083 17 19.60538423616401 27.062569713070374 27.546078703890352 25.78596734687526 18 20.84322666570474 26.570290225635173 31.854160787251097 20.732322321408994 19 20.02990456426546 24.842502392435872 33.060882099770055 22.066710943528612 20 24.54190069393018 23.897198462899738 31.769355743366784 19.7915450998033 21 23.756658327621903 24.78888919538474 30.422518674438457 21.031933802554903 22 22.2042804267271 24.316201865710966 31.394770662122983 22.084747045438952 23 21.19638061409037 26.486546128922058 32.48599019260435 19.831083064383225 24 19.90499571730992 25.440169298876597 30.822071379111083 23.8327636047024 25 21.05124304107068 26.415887047320364 32.069108684135514 20.46376122747344 26 22.524403553182808 25.352181413478696 30.64864188152615 21.474773151812347 27 21.179829838219703 26.833475853903334 30.17652039034368 21.810173917533284 28 20.87618675782325 26.326767484939857 30.389346392885713 22.407699364351185 29 19.968086709090407 26.187217567021804 31.38394900097678 22.46074672291101 30 19.299902180670816 26.539239838424816 33.29846353630667 20.862394444597694 31 20.68189196587145 25.882867188511216 32.12979486232796 21.305445983289374 32 21.94406545053829 26.117619432591304 30.032302304872367 21.90601281199804 33 22.853863014745045 25.893123011166114 29.63734703794159 21.61566693614725 34 20.949109193390157 28.898149778863246 29.707864659920457 20.44487636782614 35 19.77308461902448 29.897279094884748 29.808513181561302 20.521123104529465 36 20.781479540341103 26.10969769371304 32.074554879614325 21.034267886331534 37 20.897052052190112 26.45294946850083 31.06757455452597 21.58242392478309 38 21.10365383132779 26.026448705679815 31.69480652213737 21.175090940855025 39 22.09111272846613 25.480697480816307 31.629239986957426 20.798949803760138 40 20.267627460424904 26.33532579212084 30.786352824347464 22.61069392310679 41 21.463668571420488 25.811076429926917 30.558036993105965 22.167218005546633 42 18.838248701577488 27.52167691895283 31.18364217505487 22.456432204414813 43 19.614154732779234 27.271151926927615 30.654653915496265 22.460039424796882 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 147.0 1 175.0 2 203.0 3 519.5 4 836.0 5 836.0 6 1484.5 7 2133.0 8 2311.0 9 2489.0 10 3946.0 11 5403.0 12 5403.0 13 9777.5 14 14152.0 15 23448.0 16 32744.0 17 32086.0 18 31428.0 19 31428.0 20 34059.0 21 36690.0 22 30142.0 23 23594.0 24 26099.0 25 28604.0 26 28604.0 27 31300.5 28 33997.0 29 35985.0 30 37973.0 31 41339.0 32 44705.0 33 44705.0 34 48700.5 35 52696.0 36 56881.0 37 61066.0 38 63488.0 39 65910.0 40 65910.0 41 69643.5 42 73377.0 43 83422.0 44 93467.0 45 117123.0 46 140779.0 47 140779.0 48 144102.0 49 147425.0 50 133843.5 51 120262.0 52 112143.0 53 104024.0 54 104024.0 55 90522.5 56 77021.0 57 63320.0 58 49619.0 59 43377.0 60 37135.0 61 37135.0 62 32962.5 63 28790.0 64 25231.5 65 21673.0 66 18695.5 67 15718.0 68 15718.0 69 13381.5 70 11045.0 71 9512.5 72 7980.0 73 6334.0 74 4688.0 75 4688.0 76 3770.0 77 2852.0 78 2155.5 79 1459.0 80 1156.5 81 854.0 82 854.0 83 637.5 84 421.0 85 326.0 86 231.0 87 183.0 88 135.0 89 135.0 90 108.0 91 81.0 92 47.0 93 13.0 94 10.5 95 8.0 96 8.0 97 5.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1413831.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.77089193888884 #Duplication Level Percentage of deduplicated Percentage of total 1 77.09742756197198 36.83012880829274 2 12.803222473243068 12.23242714477695 3 4.225161830441582 6.0551924767902765 4 1.8270892982117044 3.4912674171028626 5 0.9800714803290731 2.3409444389593483 6 0.5980700737466239 1.7142204518899948 7 0.4113645636823521 1.3755876483410459 8 0.3042596538388416 1.1627804035919223 9 0.21845763508356883 0.939232447092214 >10 1.3590049291031134 12.077954535466892 >50 0.10526956194709604 3.4206896884782747 >100 0.056180340739255215 5.0163780311394035 >500 0.007660942507794044 2.652637081489747 >1k 0.005407724123148737 4.888570610195559 >5k 9.012873538581228E-4 2.625153447820684 >10k+ 4.506436769290614E-4 3.176835368572001 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16398 1.1598274475520765 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14508 1.0261481039813103 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13365 0.9453039295361327 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 9754 0.6898985805234148 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5549 0.39247972353131316 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5420 0.38335557785902274 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5399 0.3818702518193476 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5248 0.3711900502959689 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5213 0.36871450689651025 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4088 0.28914346905676847 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3995 0.2825655965953498 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3943 0.2788876464018684 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3814 0.269763500729578 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3146 0.22251598670562467 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2900 0.2051164530980011 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2885 0.20405550592680458 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2590 0.18319021155993892 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2301 0.16274929606155192 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2295 0.1623249171930733 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2006 0.14188400169468626 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1869 0.13219401753109106 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1863 0.13176963866261243 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1840 0.13014285300011103 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1826 0.12915263564032758 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1768 0.12505030657836758 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1581 0.11182383184411715 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 1505 0.10644836617672127 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1463 0.1034777140973709 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 7.072981141310383E-5 0.0 3 0.0 0.0 0.0 7.072981141310383E-5 0.0 4 0.0 0.0 0.0 1.4145962282620766E-4 0.0 5 0.0 0.0 0.0 1.4145962282620766E-4 0.0 6 0.0 0.0 0.0 1.4145962282620766E-4 0.0 7 0.0 0.0 0.0 1.4145962282620766E-4 0.0 8 0.0 0.0 0.0 1.4145962282620766E-4 0.0 9 0.0 0.0 0.0 2.121894342393115E-4 0.0 10 0.0 0.0 0.0 2.121894342393115E-4 0.0 11 0.0 0.0 0.0 2.829192456524153E-4 0.0 12 0.0 0.0 0.0 4.24378868478623E-4 0.0 13 7.072981141310383E-5 0.0 0.0 4.951086798917268E-4 0.0 14 1.4145962282620766E-4 0.0 0.0 7.072981141310383E-4 0.0 15 1.4145962282620766E-4 0.0 0.0 0.0012024067940227651 0.0 16 1.4145962282620766E-4 0.0 0.0 0.0021218943423931148 0.0 17 1.4145962282620766E-4 0.0 0.0 0.003041381890763465 0.0 18 1.4145962282620766E-4 0.0 0.0 0.0038194098163076068 0.0 19 1.4145962282620766E-4 0.0 0.0 0.004526707930438645 0.0 20 1.4145962282620766E-4 0.0 0.0 0.005587655101635202 0.0 21 1.4145962282620766E-4 0.0 0.0 0.007921738878267628 0.0 22 1.4145962282620766E-4 0.0 0.0 0.01365085360272904 0.0 23 1.4145962282620766E-4 0.0 0.0 0.022421350217953915 0.0 24 1.4145962282620766E-4 0.0 0.0 0.0369209615576402 0.0 25 1.4145962282620766E-4 0.0 0.0 0.044984160058734034 0.0 26 1.4145962282620766E-4 0.0 0.0 0.05474487403374236 0.0 27 1.4145962282620766E-4 0.0 0.0 0.11309696844955303 0.0 28 1.4145962282620766E-4 0.0 0.0 0.18262437306863408 0.0 29 1.4145962282620766E-4 0.0 0.0 0.2566784856181538 0.0 30 1.4145962282620766E-4 0.0 0.0 0.4044330616601277 0.0 31 1.4145962282620766E-4 0.0 0.0 0.5983742045548583 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3695 0.0 30.59134 1 TATACCG 85 1.9772415E-9 23.941177 5 ATTGGAC 390 0.0 23.717949 3 CGCAATA 40 0.0019314061 23.125 36 GTATTGG 400 0.0 22.2 1 TAGGTCG 45 0.0038262368 20.555555 21 TTGGACC 800 0.0 18.962502 4 GTATCAA 6240 0.0 18.707533 2 ACTGACG 50 0.007035662 18.5 23 ATAGACG 50 0.007035662 18.5 3 TGCGCGC 50 0.007035662 18.5 19 GGACCCT 785 0.0 17.910828 6 CGTCTGT 375 0.0 17.266666 34 TGTACGT 75 2.0676902E-4 17.266666 5 TATTGGA 580 0.0 17.224138 2 TGGACCC 855 0.0 17.093567 5 ATGTCCG 130 1.3938916E-8 17.076923 7 TAGTACC 65 0.0015801768 17.076923 4 GTACTAG 155 4.0199666E-10 16.709677 1 ACCGACC 135 2.2204404E-8 16.444445 8 >>END_MODULE