##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088247_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1612038 Sequences flagged as poor quality 0 Sequence length 43 %GC 44 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.98104201017594 31.0 30.0 33.0 27.0 34.0 2 30.848971302165335 31.0 31.0 34.0 27.0 34.0 3 30.821266620265774 31.0 31.0 34.0 27.0 34.0 4 35.026384613762204 35.0 35.0 37.0 32.0 37.0 5 34.94233882824102 35.0 35.0 37.0 32.0 37.0 6 35.06353014010836 36.0 35.0 37.0 32.0 37.0 7 34.664324290122195 35.0 35.0 37.0 31.0 37.0 8 34.893088748528264 36.0 35.0 37.0 32.0 37.0 9 36.331633621539936 38.0 35.0 39.0 32.0 39.0 10 36.276959972407596 38.0 35.0 39.0 32.0 39.0 11 36.36999127812123 38.0 35.0 39.0 32.0 39.0 12 36.095487823488035 38.0 35.0 39.0 31.0 39.0 13 36.26128602427486 38.0 35.0 39.0 32.0 39.0 14 37.194233014358225 39.0 36.0 40.0 32.0 41.0 15 37.24699107589275 39.0 36.0 40.0 32.0 41.0 16 37.1727031248643 39.0 36.0 40.0 31.0 41.0 17 37.24792901904298 39.0 36.0 40.0 32.0 41.0 18 37.24189628284197 39.0 36.0 40.0 32.0 41.0 19 37.315183637110295 39.0 36.0 40.0 32.0 41.0 20 37.27668268365882 39.0 36.0 40.0 31.0 41.0 21 37.20901492396581 39.0 36.0 40.0 31.0 41.0 22 37.12882760828219 39.0 36.0 40.0 31.0 41.0 23 36.998067663417366 39.0 36.0 40.0 31.0 41.0 24 36.92489941304113 39.0 36.0 40.0 31.0 41.0 25 36.84431198272001 39.0 35.0 40.0 31.0 41.0 26 36.59512058648742 38.0 35.0 40.0 30.0 41.0 27 36.46847468856193 38.0 35.0 40.0 30.0 41.0 28 36.32629689870834 38.0 35.0 40.0 30.0 41.0 29 36.16776589633743 38.0 35.0 40.0 30.0 41.0 30 36.014132421196024 38.0 35.0 40.0 29.0 41.0 31 35.774634965180724 38.0 34.0 40.0 29.0 41.0 32 35.53670074774912 38.0 34.0 40.0 27.0 41.0 33 35.696510255961705 38.0 34.0 40.0 29.0 41.0 34 35.69961936381152 38.0 34.0 40.0 29.0 41.0 35 35.62264413121775 38.0 34.0 40.0 28.0 41.0 36 35.54300581003674 38.0 34.0 40.0 27.0 41.0 37 35.39275687049561 38.0 34.0 40.0 27.0 41.0 38 35.28094747146159 38.0 34.0 40.0 26.0 41.0 39 35.274191427249235 38.0 34.0 40.0 26.0 41.0 40 35.1409191346606 38.0 34.0 40.0 25.0 41.0 41 34.995287331936346 38.0 33.0 40.0 25.0 41.0 42 34.81500498127215 38.0 33.0 40.0 24.0 41.0 43 34.48847980010397 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 3.0 15 8.0 16 16.0 17 44.0 18 119.0 19 254.0 20 566.0 21 1097.0 22 2011.0 23 3540.0 24 5968.0 25 9498.0 26 14563.0 27 21219.0 28 29940.0 29 40332.0 30 52333.0 31 65957.0 32 81411.0 33 99730.0 34 121158.0 35 145556.0 36 178638.0 37 223649.0 38 265270.0 39 249157.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.58579140193966 24.764304563540065 13.162096675140411 22.487807359379865 2 18.13759973400131 22.562061192105894 35.9320313789129 23.368307694979894 3 19.776022649590146 26.391685555799555 31.730641585372055 22.101650209238244 4 13.279029402532693 15.707197969278642 35.42943776759605 35.58433486059261 5 11.65809987109485 39.80607156903249 34.986023902662346 13.549804657210313 6 32.197379962507085 35.88104002511107 15.384376795087956 16.537203217293886 7 25.086815571345095 34.55898682289128 21.448067601384086 18.90613000437955 8 27.5690151224723 33.63661402522769 20.154673773198894 18.639697079101115 9 25.21969085096009 13.61611823046355 23.0949890759399 38.06920184263646 10 16.19161583039606 27.435891709748777 34.04770855277605 22.324783907079112 11 32.06853684590561 21.519343836807817 24.831362536118874 21.58075678116769 12 20.165219430311197 26.710908799916627 31.694290084973183 21.429581684798993 13 30.996911983464408 20.656026718973123 28.382333418939254 19.964727878623208 14 21.07487540616288 22.2770182836881 27.709768628282955 28.93833768186606 15 23.317874640672244 28.70062616389936 26.22276894217134 21.75873025325706 16 22.414546059087936 28.219247933361373 26.510107081842982 22.85609892570771 17 19.892955376982428 26.809107477615292 27.4910392931184 25.80689785228388 18 21.13033315591816 26.29280451205245 31.380525769243654 21.196336562785742 19 20.319123990873663 24.87292483179677 32.45531432881855 22.352636848511015 20 24.606491906518333 23.93603624728449 31.214028453423552 20.24344339277362 21 23.963516989053605 24.744826114520873 30.038994118004663 21.252662778420856 22 22.394633377128827 24.341609813168176 30.952744290147006 22.31101251955599 23 21.494592559232476 26.32555808237771 31.951976318176122 20.22787304021369 24 20.412856272618885 25.394500625915768 30.294757319616533 23.897885781848814 25 21.528462728546103 26.209803987250922 31.44051194822951 20.82122133597347 26 22.770244870158148 25.30709573843793 30.13675856276341 21.785900828640518 27 21.457620726062288 26.648503323122657 29.813627222187073 22.080248728627986 28 21.34602286050329 26.059001090545014 29.98651396555168 22.60846208340002 29 20.431342189203978 26.050626598132304 30.873651861804746 22.644379350858976 30 19.88240971987013 26.28964081491876 32.58763130893937 21.24031815627175 31 21.180766210225812 25.70832697492243 31.52711040310464 21.583796411747116 32 22.068648505804454 25.878174087707613 29.66232805926411 22.390849347223824 33 22.940526215883246 25.781774375045753 29.417420681150197 21.860278727920807 34 21.416740796432837 28.421042183869115 29.336777420879656 20.82543959881839 35 20.269497369168718 29.467171369409407 29.462518873624568 20.80081238779731 36 21.275739157513655 25.896846104124094 31.440387881675246 21.387026856687 37 21.229586399328053 26.26538580356046 30.542146028815697 21.962881768295784 38 21.381133695359537 25.80323788893314 31.26626047276801 21.54936794293931 39 22.270504789589328 25.33234328223032 31.22252701239053 21.174624915789828 40 20.733134082447187 26.18772014059222 30.338552813271153 22.74059296368944 41 21.683297788265538 25.642199501500585 30.340661944693608 22.333840765540266 42 19.31424693462561 27.255623006405553 30.74859277510828 22.681537283860553 43 19.96894614146813 27.03943703560338 30.350215069371817 22.64140175355668 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 130.0 1 169.5 2 209.0 3 557.0 4 905.0 5 905.0 6 1584.5 7 2264.0 8 2592.0 9 2920.0 10 4441.5 11 5963.0 12 5963.0 13 10835.0 14 15707.0 15 25192.0 16 34677.0 17 34121.5 18 33566.0 19 33566.0 20 36465.0 21 39364.0 22 32834.5 23 26305.0 24 28989.0 25 31673.0 26 31673.0 27 35072.5 28 38472.0 29 40687.5 30 42903.0 31 46321.0 32 49739.0 33 49739.0 34 54078.5 35 58418.0 36 63099.0 37 67780.0 38 71636.5 39 75493.0 40 75493.0 41 79394.0 42 83295.0 43 94212.5 44 105130.0 45 129737.0 46 154344.0 47 154344.0 48 157739.5 49 161135.0 50 148674.0 51 136213.0 52 128494.5 53 120776.0 54 120776.0 55 105481.0 56 90186.0 57 75852.5 58 61519.0 59 54572.0 60 47625.0 61 47625.0 62 42249.0 63 36873.0 64 32345.5 65 27818.0 66 24061.5 67 20305.0 68 20305.0 69 17487.5 70 14670.0 71 12642.5 72 10615.0 73 8558.0 74 6501.0 75 6501.0 76 5190.0 77 3879.0 78 2999.0 79 2119.0 80 1712.5 81 1306.0 82 1306.0 83 929.0 84 552.0 85 438.5 86 325.0 87 272.5 88 220.0 89 220.0 90 166.0 91 112.0 92 67.5 93 23.0 94 14.0 95 5.0 96 5.0 97 4.0 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1612038.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.26622587952746 #Duplication Level Percentage of deduplicated Percentage of total 1 76.84612629642378 37.090724897898845 2 12.821343891101344 12.37675760653994 3 4.347100253574929 6.294543682799958 4 1.909984030242594 3.6875088251991697 5 1.0303062287588447 2.486449658117924 6 0.6001836445648454 1.738115961465891 7 0.4058968267786962 1.3713775547558789 8 0.29213270135340763 1.1280114360256086 9 0.22756430201071703 0.9885303002669645 >10 1.3334739514539533 12.120564334164161 >50 0.11427595197118054 3.774791881930261 >100 0.059503125411003284 5.1483170681185895 >500 0.0062497013444042 2.194562932636722 >1k 0.0046872760083031505 4.317798328016702 >5k 6.510105567087709E-4 1.7678545819994735 >10k+ 5.208084453670167E-4 3.514090950063865 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 16924 1.0498511821681622 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 14997 0.9303130571363702 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13929 0.8640615171602655 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 10068 0.624551034156763 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5863 0.36370110382013326 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5828 0.3615299391205418 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5596 0.34713821882610707 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5557 0.3447189210179909 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5287 0.32796993619257114 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3955 0.2453416110538337 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3872 0.24019284905194543 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3859 0.23938641644924005 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3726 0.23113599059079254 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3333 0.2067569126782371 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3170 0.19664548850585406 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3072 0.19056622734699802 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2415 0.14981036427180996 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2274 0.141063672196313 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2181 0.13529457742311285 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2092 0.12977361575843746 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2076 0.1287810833243385 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1915 0.11879372570621784 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1902 0.11798729310351244 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1834 0.11376903025859192 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1646 0.10210677415792928 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1638 0.10161050794087981 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 6.203327713118425E-5 0.0 5 0.0 0.0 0.0 6.203327713118425E-5 0.0 6 0.0 0.0 0.0 6.203327713118425E-5 1.240665542623685E-4 7 0.0 0.0 0.0 6.203327713118425E-5 1.240665542623685E-4 8 0.0 0.0 0.0 6.203327713118425E-5 1.240665542623685E-4 9 0.0 0.0 0.0 6.203327713118425E-5 1.240665542623685E-4 10 0.0 0.0 0.0 1.240665542623685E-4 1.240665542623685E-4 11 0.0 0.0 0.0 3.721996627871055E-4 1.240665542623685E-4 12 0.0 0.0 0.0 6.203327713118425E-4 1.8609983139355275E-4 13 0.0 0.0 0.0 6.823660484430268E-4 2.48133108524737E-4 14 0.0 0.0 0.0 8.684658798365796E-4 2.48133108524737E-4 15 0.0 0.0 0.0 0.001488798651148422 2.48133108524737E-4 16 0.0 0.0 0.0 0.0023572645309850016 2.48133108524737E-4 17 0.0 0.0 0.0 0.0035979300736086865 2.48133108524737E-4 18 0.0 0.0 0.0 0.004156229567789345 2.48133108524737E-4 19 0.0 0.0 0.0 0.004590462507707635 3.1016638565592127E-4 20 0.0 0.0 0.0 0.005707061496068951 3.1016638565592127E-4 21 0.0 0.0 0.0 0.00818839258131632 3.721996627871055E-4 22 0.0 0.0 0.0 0.013337154583204613 3.721996627871055E-4 23 0.0 0.0 0.0 0.023820778418374752 3.721996627871055E-4 24 0.0 0.0 0.0 0.04050772996666332 3.721996627871055E-4 25 0.0 0.0 0.0 0.046711057679781745 3.721996627871055E-4 26 0.0 0.0 0.0 0.0563262156351153 3.721996627871055E-4 27 0.0 0.0 0.0 0.11922795864613614 4.342329399182898E-4 28 0.0 0.0 0.0 0.1788419379692042 4.342329399182898E-4 29 0.0 0.0 0.0 0.25477066917777375 4.342329399182898E-4 30 0.0 0.0 0.0 0.3865913830815403 4.342329399182898E-4 31 0.0 0.0 0.0 0.5731254474150113 4.342329399182898E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 3920 0.0 28.457907 1 ATTGGAC 590 0.0 25.084745 3 GTATTGG 595 0.0 24.252102 1 TATTGGA 730 0.0 20.020546 2 TTGGACC 1025 0.0 19.492682 4 TATACCG 105 2.2611857E-8 19.380953 5 TGGACCC 1105 0.0 19.253393 5 TAGACCG 50 0.00703608 18.5 5 GGACCCT 1160 0.0 18.340517 6 CGACGAG 95 3.6082092E-6 17.526316 24 TGCGACG 85 2.7242162E-5 17.411764 22 TTACGCT 65 0.001580307 17.076923 4 GTATCAA 6790 0.0 16.919733 2 GACCCTC 1205 0.0 16.580914 7 ACGGACC 125 1.6588092E-7 16.279999 8 GTATACG 115 1.2428773E-6 16.086956 1 CGTCTGT 300 0.0 16.033333 34 GCGCGAT 130 2.5906593E-7 15.653846 13 CGACGAA 160 1.0972144E-8 15.03125 10 ACCCTCG 1405 0.0 14.879004 8 >>END_MODULE