##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088245_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1414115 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.967288374707856 31.0 30.0 33.0 27.0 34.0 2 30.84494047513816 31.0 31.0 34.0 27.0 34.0 3 30.888151246539355 31.0 31.0 34.0 27.0 34.0 4 35.065377992596076 35.0 35.0 37.0 32.0 37.0 5 34.96269468890437 35.0 35.0 37.0 32.0 37.0 6 35.07171906103817 36.0 35.0 37.0 32.0 37.0 7 34.69470163317693 35.0 35.0 37.0 31.0 37.0 8 34.90835752396375 36.0 35.0 37.0 32.0 37.0 9 36.36331345046195 38.0 35.0 39.0 32.0 39.0 10 36.28461970914671 38.0 35.0 39.0 32.0 39.0 11 36.37198601245302 38.0 35.0 39.0 32.0 39.0 12 36.11750458767498 38.0 35.0 39.0 31.0 39.0 13 36.28708061225572 38.0 35.0 39.0 32.0 39.0 14 37.22089009734003 39.0 36.0 40.0 32.0 41.0 15 37.26742520940659 39.0 36.0 40.0 32.0 41.0 16 37.193973616007185 39.0 36.0 40.0 32.0 41.0 17 37.266227994187176 39.0 36.0 40.0 32.0 41.0 18 37.268495136534156 39.0 36.0 40.0 32.0 41.0 19 37.344105677402474 39.0 36.0 40.0 32.0 41.0 20 37.30344066783819 39.0 36.0 40.0 31.0 41.0 21 37.24596231565325 39.0 36.0 40.0 31.0 41.0 22 37.166627890942394 39.0 36.0 40.0 31.0 41.0 23 37.050226466730074 39.0 36.0 40.0 31.0 41.0 24 36.97910778119177 39.0 36.0 40.0 31.0 41.0 25 36.8968429017442 39.0 35.0 40.0 31.0 41.0 26 36.66445373961807 38.0 35.0 40.0 30.0 41.0 27 36.52683692627544 38.0 35.0 40.0 30.0 41.0 28 36.373529026988614 38.0 35.0 40.0 30.0 41.0 29 36.210394487011314 38.0 35.0 40.0 30.0 41.0 30 36.06105444040973 38.0 35.0 40.0 30.0 41.0 31 35.823949254480716 38.0 34.0 40.0 29.0 41.0 32 35.59953327699657 38.0 34.0 40.0 28.0 41.0 33 35.730962474763366 38.0 34.0 40.0 29.0 41.0 34 35.74100055511751 38.0 34.0 40.0 29.0 41.0 35 35.66536455663083 38.0 34.0 40.0 28.0 41.0 36 35.59252536038441 38.0 34.0 40.0 27.0 41.0 37 35.43742411331469 38.0 34.0 40.0 27.0 41.0 38 35.32523026769393 38.0 34.0 40.0 27.0 41.0 39 35.302582180374294 38.0 34.0 40.0 26.0 41.0 40 35.168470739649884 38.0 34.0 40.0 25.0 41.0 41 35.02006908914763 38.0 34.0 40.0 25.0 41.0 42 34.847513816061635 38.0 33.0 40.0 24.0 41.0 43 34.51115503336009 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 2.0 16 15.0 17 30.0 18 92.0 19 211.0 20 460.0 21 900.0 22 1630.0 23 3020.0 24 4991.0 25 8323.0 26 12476.0 27 18266.0 28 25715.0 29 35134.0 30 45847.0 31 57393.0 32 71047.0 33 86968.0 34 105774.0 35 127340.0 36 155623.0 37 195577.0 38 231102.0 39 226179.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.01606305003483 25.07518836869703 13.544584422059025 22.364164159209114 2 18.026044557903706 22.841635934842643 35.79376500496777 23.338554502285884 3 19.734109319256213 25.9895411617867 31.98728533393677 22.28906418502031 4 13.436884553236478 16.087871212737294 35.185115779126875 35.29012845489935 5 11.65683130438472 39.97114803251504 34.8348613797322 13.537159283368041 6 32.03890772674075 35.855287582693066 15.427387447272675 16.67841724329351 7 24.830088076287996 34.78387542738744 21.608780049713072 18.777256446611485 8 27.387376557069267 33.81280871781998 20.223814894828216 18.575999830282544 9 25.173341630631175 13.862946082885763 23.506079774275783 37.45763251220728 10 16.289198544672818 28.06023555368552 33.972767419905736 21.677798481735927 11 32.008005006664945 21.992907224659948 24.623386358252333 21.375701410422774 12 20.06159329333187 27.26659430102927 31.627555043260276 21.04425736237859 13 30.644466680574066 21.204074633251185 28.33079346446364 19.820665221711106 14 20.996029318690486 22.742987663662433 28.11808091986861 28.14290209777847 15 23.2350268542516 29.223224419513265 26.17912970302981 21.362619023205326 16 22.245008362120476 28.32343904137924 26.82808682462176 22.603465771878525 17 19.83007039738635 27.448262694335323 27.76952369503187 24.952143213246448 18 20.78084172786513 26.70256662294085 31.646365394610765 20.870226254583255 19 20.258677688872545 25.576491303748284 32.70264441010809 21.462186597271085 20 24.10277806260453 24.5296174639262 31.61397764679676 19.753626826672512 21 23.443779324878104 25.2737577919759 30.274411911336774 21.008050971809222 22 21.928768169491168 25.212871654709833 31.074841862224783 21.783518313574216 23 21.218288470173924 26.91994639757021 31.772451321144317 20.08931381111154 24 20.034014206765363 26.18443337352337 30.545323400147794 23.236229019563474 25 20.991927813508802 26.794779773922205 31.699897108792424 20.513395303776566 26 22.270607411702727 25.87476973230607 30.39674991072155 21.457872945269656 27 21.05033890454454 27.169713920013578 30.082489755076498 21.69745742036539 28 20.8048850341026 26.79852770107099 30.164590574316797 22.23199669050961 29 20.06138114651213 26.714871138485908 31.03799903119619 22.185748683805773 30 19.547349402276335 26.88416430064033 32.72760701923111 20.840879277852224 31 20.758424880579017 26.253239658726486 31.79005950718294 21.198275953511562 32 21.718459955519883 26.66890599420839 30.09910792262298 21.513526127648742 33 22.634368491954334 26.51382666897671 29.556082779689063 21.295722059379894 34 20.997302199608942 28.801335110652243 29.678279347860677 20.523083341878134 35 19.827595351156024 29.550213384342854 29.863554237102356 20.758637027398763 36 20.66317095851469 26.39700448690524 31.776977119965487 21.16284743461458 37 20.661685930776493 26.579026458244204 31.103481682890006 21.6558059280893 38 20.852547352938057 26.32232880635592 31.628545061752405 21.19657877895362 39 21.7857812129848 25.678251061618045 31.565325309469173 20.970642415927983 40 20.24029163116154 26.290011774148496 31.021593010469445 22.44810358422052 41 20.980542600849294 25.80080120782256 30.8056275479717 22.413028643356444 42 18.851154255488414 27.20132379615519 31.35409779261234 22.593424155744053 43 19.35005285991592 26.99525851857876 31.182046721801264 22.472641899704055 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 147.0 1 208.0 2 269.0 3 616.0 4 963.0 5 963.0 6 1638.5 7 2314.0 8 2576.5 9 2839.0 10 4420.5 11 6002.0 12 6002.0 13 10577.0 14 15152.0 15 23960.5 16 32769.0 17 31865.5 18 30962.0 19 30962.0 20 33674.0 21 36386.0 22 30596.5 23 24807.0 24 27442.0 25 30077.0 26 30077.0 27 32894.5 28 35712.0 29 37554.0 30 39396.0 31 42251.0 32 45106.0 33 45106.0 34 49050.0 35 52994.0 36 57556.5 37 62119.0 38 64914.5 39 67710.0 40 67710.0 41 71612.0 42 75514.0 43 84448.5 44 93383.0 45 114617.0 46 135851.0 47 135851.0 48 137900.5 49 139950.0 50 127406.5 51 114863.0 52 107178.0 53 99493.0 54 99493.0 55 88061.0 56 76629.0 57 64667.5 58 52706.0 59 47219.0 60 41732.0 61 41732.0 62 36477.5 63 31223.0 64 27213.5 65 23204.0 66 19495.0 67 15786.0 68 15786.0 69 13412.0 70 11038.0 71 9198.5 72 7359.0 73 5928.5 74 4498.0 75 4498.0 76 3415.0 77 2332.0 78 1859.0 79 1386.0 80 1057.0 81 728.0 82 728.0 83 530.5 84 333.0 85 273.5 86 214.0 87 155.5 88 97.0 89 97.0 90 75.0 91 53.0 92 32.5 93 12.0 94 9.0 95 6.0 96 6.0 97 3.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1414115.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 49.72166796375049 #Duplication Level Percentage of deduplicated Percentage of total 1 76.45155411066958 38.01298788803416 2 12.964892186236233 12.89272128939722 3 4.596177029636197 6.855887645105637 4 2.0494316471957266 4.076046395050725 5 1.0464615529312926 2.601590693584022 6 0.6437684942667968 1.920554599047437 7 0.41752499377988905 1.453202737510344 8 0.2696941317123575 1.0727713655019064 9 0.21946783650124954 0.9821076205714028 >10 1.1862329226751562 10.884656630590529 >50 0.08896532190739975 3.030036518921876 >100 0.05375621779679005 5.109923256875048 >500 0.006755441315446445 2.4991065330046713 >1k 0.004599449406261409 4.755870698386053 >5k 2.874655878913381E-4 0.892471685897862 >10k+ 4.311983818370071E-4 2.960064442521104 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15405 1.089373919377137 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 13890 0.9822397754072334 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 12124 0.8573560141855507 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7260 0.5133953037765671 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5228 0.3697011912043929 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 4678 0.330807607584956 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4272 0.3020970713131535 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4171 0.29495479504849326 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4156 0.2938940609497813 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3288 0.23251291443765182 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3178 0.22473419771376446 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3096 0.2189355179741393 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3041 0.21504615961219561 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2622 0.18541632045484277 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2589 0.18308270543767657 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2294 0.16222160149634224 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2231 0.1577665182817522 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1907 0.13485466174957483 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1879 0.1328746247653126 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1766 0.12488376122168282 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1629 0.11519572312011399 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1527 0.10798273124887298 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1493 0.10557840062512597 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1447 0.10232548272240943 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1446 0.10225476711582862 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1425 0.10076973937763194 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 7.071560658079434E-5 0.0 8 0.0 0.0 0.0 7.071560658079434E-5 0.0 9 0.0 0.0 0.0 7.071560658079434E-5 0.0 10 0.0 0.0 0.0 7.071560658079434E-5 0.0 11 0.0 0.0 0.0 1.414312131615887E-4 0.0 12 0.0 0.0 0.0 2.828624263231774E-4 0.0 13 0.0 0.0 0.0 3.5357803290397177E-4 0.0 14 0.0 0.0 0.0 4.950092460655604E-4 0.0 15 0.0 0.0 0.0 8.485872789695322E-4 0.0 16 0.0 0.0 0.0 0.001414312131615887 0.0 17 0.0 0.0 0.0 0.002970055476393363 0.0 18 0.0 0.0 0.0 0.0031114866895549514 0.0 19 0.0 0.0 0.0 0.0035357803290397174 0.0 20 0.0 0.0 0.0 0.004313652001428455 0.0 21 0.0 0.0 0.0 0.006859413838337052 0.0 22 0.0 0.0 0.0 0.011668075085831068 0.0 23 0.0 0.0 0.0 0.0200125166623648 0.0 24 0.0 0.0 0.0 0.03245846342058461 0.0 25 0.0 0.0 0.0 0.0400957489313104 0.0 26 0.0 0.0 0.0 0.05105666795133352 0.0 27 0.0 0.0 0.0 0.13584468024170596 0.0 28 0.0 0.0 0.0 0.2187233711543969 0.0 29 0.0 0.0 0.0 0.3066935857409051 0.0 30 0.0 0.0 0.0 0.46198505779232946 0.0 31 0.0 0.0 0.0 0.6818398786520191 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CCTAACG 25 0.005496767 29.599998 2 GGTATCA 3890 0.0 28.867609 1 CGCCGGA 40 0.0019314059 23.125 14 GTATTGG 380 0.0 21.421053 1 ATTGGAC 385 0.0 20.662336 3 GGCGTCG 45 0.0038262364 20.555557 8 ATAACGC 45 0.0038262364 20.555557 3 TTAGACC 120 5.176844E-9 18.5 4 CGTTTAG 90 2.1529286E-6 18.5 26 CTACGCT 50 0.0070356647 18.499998 25 ACCGTGT 100 2.876095E-7 18.499998 8 CCGGTAC 50 0.0070356647 18.499998 3 GTATCAA 6570 0.0 17.570776 2 TTGGACC 675 0.0 17.540741 4 GTATTAG 120 1.04168066E-7 16.958332 1 GGACCCT 710 0.0 16.676058 6 CGTCTGT 400 0.0 16.65 34 CGTGTCT 160 6.2937033E-10 16.1875 35 TGGACCC 715 0.0 16.041958 5 AGTATCA 220 0.0 15.977273 1 >>END_MODULE