##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088243_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 633890 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.835608701825237 31.0 30.0 33.0 27.0 34.0 2 30.768341510356688 31.0 31.0 34.0 27.0 34.0 3 30.66113836785562 31.0 31.0 34.0 27.0 34.0 4 34.93116471312057 35.0 35.0 37.0 32.0 37.0 5 34.88454148196059 35.0 35.0 37.0 32.0 37.0 6 35.0043256716465 36.0 35.0 37.0 32.0 37.0 7 34.55138273201975 35.0 35.0 37.0 30.0 37.0 8 34.83899256968875 35.0 35.0 37.0 32.0 37.0 9 36.25674012841345 38.0 35.0 39.0 32.0 39.0 10 36.20508921106185 38.0 35.0 39.0 32.0 39.0 11 36.302629793812805 38.0 35.0 39.0 32.0 39.0 12 36.028694252946096 38.0 35.0 39.0 30.0 39.0 13 36.20239946993958 38.0 35.0 39.0 32.0 39.0 14 37.110683241571884 39.0 36.0 40.0 31.0 41.0 15 37.16375238606067 39.0 36.0 40.0 32.0 41.0 16 37.100741453564495 39.0 36.0 40.0 31.0 41.0 17 37.186404581236495 39.0 36.0 40.0 31.0 41.0 18 37.19543296155484 39.0 36.0 40.0 31.0 41.0 19 37.283277855779396 39.0 36.0 40.0 31.0 41.0 20 37.24083989335689 39.0 36.0 40.0 31.0 41.0 21 37.18624051491584 39.0 36.0 40.0 31.0 41.0 22 37.10338702298506 39.0 36.0 40.0 31.0 41.0 23 36.96506807174747 39.0 36.0 40.0 31.0 41.0 24 36.899821735632365 39.0 35.0 40.0 31.0 41.0 25 36.814665004969314 39.0 35.0 40.0 30.0 41.0 26 36.56249033744025 38.0 35.0 40.0 30.0 41.0 27 36.42406095694837 38.0 35.0 40.0 30.0 41.0 28 36.266087176008455 38.0 35.0 40.0 30.0 41.0 29 36.114281657700865 38.0 35.0 40.0 30.0 41.0 30 35.932145955922955 38.0 34.0 40.0 29.0 41.0 31 35.67468330467431 38.0 34.0 40.0 29.0 41.0 32 35.39824259729606 38.0 34.0 40.0 27.0 41.0 33 35.53641799050308 38.0 34.0 40.0 28.0 41.0 34 35.535384688195116 38.0 34.0 40.0 28.0 41.0 35 35.44810140560665 38.0 34.0 40.0 27.0 41.0 36 35.36434554891227 38.0 34.0 40.0 27.0 41.0 37 35.19817633974349 38.0 34.0 40.0 26.0 41.0 38 35.07190048746628 38.0 34.0 40.0 25.0 41.0 39 35.033715628894605 38.0 33.0 40.0 25.0 41.0 40 34.882569530991184 38.0 33.0 40.0 24.0 41.0 41 34.721256053889476 38.0 33.0 40.0 24.0 41.0 42 34.5187272239663 38.0 33.0 40.0 23.0 41.0 43 34.180670147817445 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 0.0 15 2.0 16 10.0 17 19.0 18 54.0 19 95.0 20 238.0 21 449.0 22 859.0 23 1567.0 24 2592.0 25 4039.0 26 6166.0 27 8921.0 28 12491.0 29 16850.0 30 21555.0 31 27064.0 32 32872.0 33 39748.0 34 47949.0 35 57631.0 36 70199.0 37 87926.0 38 99613.0 39 94980.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.79048415340201 25.52919276215116 13.740869867011627 21.9394532174352 2 17.745823407846785 23.238890028238337 36.20328448153465 22.81200208238022 3 19.49849342945937 26.921232390477844 32.30181892757418 21.2784552524886 4 13.043903516382969 16.3889633848144 35.74594961270883 34.8211834860938 5 11.239331745255486 40.61903484831753 34.86756377289435 13.274069633532632 6 31.297543737872502 36.482197226648154 15.491015791383363 16.72924324409598 7 23.96614554575715 35.4192367760968 22.045149789395637 18.569467888750413 8 27.325087949013238 34.059063875435804 20.357633027812398 18.258215147738564 9 24.87024562621275 14.138572938522456 23.97608417864298 37.01509725662181 10 16.384230702487812 28.107242581520453 34.12611020839578 21.382416507595956 11 31.12133019924593 22.410986133240783 25.1898594393349 21.277824228178392 12 19.88089416144757 27.961318209784032 31.771127482686268 20.38666014608213 13 30.396914291123068 21.400242944359434 28.887504141097036 19.315338623420466 14 20.64837747874237 23.089179510640648 28.758775181813878 27.503667828803103 15 22.92700626291628 29.604978781807567 26.742968022843076 20.725046932433074 16 21.501049077915727 28.67674202148638 27.538689678019846 22.28351922257805 17 19.26627648330152 27.95847860038808 28.328258846172048 24.44698607013835 18 20.129044471438263 27.03576330278124 32.36176623704428 20.473425988736217 19 19.606240830427993 25.73490668728013 33.899256968874724 20.759595513417153 20 23.504866774992507 24.631402924797676 32.637050592374074 19.226679707835746 21 22.949723138083893 25.446686333591 31.439366451592548 20.164224076732555 22 21.35370490148133 25.21115650980454 32.286043319818894 21.149095268895234 23 20.79367082616858 26.991907113221536 32.98663806023127 19.227784000378616 24 19.343261449147327 26.37161021628358 31.536859707520232 22.748268627048855 25 20.433040432882677 27.096026124406443 32.71876824054647 19.752165202164413 26 21.478489958825662 26.299042420609254 31.457823912666232 20.76464370789885 27 20.398491851898594 27.591064695767404 31.021312846077393 20.989130606256605 28 20.231901434002744 27.04491315527931 31.29312656770102 21.430058843016926 29 19.402262222152107 27.079935004496047 32.08159144331035 21.43621133004149 30 18.940510183154807 27.267033712473772 33.771474546056886 20.020981558314535 31 20.360788149363454 26.649734181009322 32.65187966366404 20.33759800596318 32 21.138841123854295 26.97834009055199 30.95142690372147 20.931391881872248 33 21.882187761283504 27.025982425972963 30.37609048888608 20.715739323857452 34 20.499613497609996 29.26359462998312 30.444398870466483 19.7923930019404 35 19.113568600230323 30.162646515957025 30.658316111628203 20.065468772184445 36 20.127782422817837 26.844405180709586 32.573001624887596 20.454810771584974 37 20.046064774645444 27.080408272728707 31.880925712663082 20.99260123996277 38 20.347852151004115 26.818690940068468 32.292984587231224 20.540472321696193 39 21.225133698275727 26.31749988168294 32.17261670005837 20.284749719982962 40 19.59945731909322 26.989540772058245 31.519033270756758 21.891968638091782 41 20.422628531764186 26.436605720235374 31.41870040543312 21.722065342567323 42 18.228714761236176 27.876287683983026 31.79794601587026 22.097051538910538 43 18.786224739308082 27.770748868100142 31.593809651516825 21.84921674107495 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 86.0 1 101.5 2 117.0 3 286.0 4 455.0 5 455.0 6 789.0 7 1123.0 8 1227.5 9 1332.0 10 2102.0 11 2872.0 12 2872.0 13 5046.0 14 7220.0 15 12050.5 16 16881.0 17 16167.5 18 15454.0 19 15454.0 20 16888.5 21 18323.0 22 15129.5 23 11936.0 24 13037.0 25 14138.0 26 14138.0 27 15542.0 28 16946.0 29 17904.5 30 18863.0 31 20471.0 32 22079.0 33 22079.0 34 24206.5 35 26334.0 36 28257.5 37 30181.0 38 31370.0 39 32559.0 40 32559.0 41 34088.5 42 35618.0 43 39452.0 44 43286.0 45 52495.5 46 61705.0 47 61705.0 48 61935.0 49 62165.0 50 56345.5 51 50526.0 52 46561.5 53 42597.0 54 42597.0 55 36781.0 56 30965.0 57 25492.0 58 20019.0 59 17467.5 60 14916.0 61 14916.0 62 13201.0 63 11486.0 64 9810.5 65 8135.0 66 6931.5 67 5728.0 68 5728.0 69 4754.0 70 3780.0 71 3189.5 72 2599.0 73 2076.0 74 1553.0 75 1553.0 76 1228.5 77 904.0 78 700.5 79 497.0 80 366.0 81 235.0 82 235.0 83 187.0 84 139.0 85 106.0 86 73.0 87 60.0 88 47.0 89 47.0 90 30.5 91 14.0 92 8.5 93 3.0 94 1.5 95 0.0 96 0.0 97 0.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 633890.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.1353150401915 #Duplication Level Percentage of deduplicated Percentage of total 1 83.06283505324153 47.45821248898417 2 10.152307747849292 11.601106031166927 3 2.7883170957318617 4.779341270897752 4 1.1897725649317996 2.719121212942203 5 0.6398698204866488 1.8279581889107728 6 0.4247104898304913 1.4559580582403502 7 0.27739860846629855 1.109447982050289 8 0.21059852016279842 0.9626090237199687 9 0.16388279167292202 0.8427145438708625 >10 0.974512677843461 10.282971938345538 >50 0.06318601872162914 2.5194732240789546 >100 0.0439796854374877 5.60670954859541 >500 0.0038969341526877946 1.5219892885928343 >1k 0.0038969341526877946 3.916299501734435 >5k 8.350573184330988E-4 3.396087697869528 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 7816 1.2330215021533704 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7286 1.14941078105034 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 6252 0.986290996860654 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 3284 0.5180709586836832 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2562 0.4041710706904984 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 2141 0.3377557620407326 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 2106 0.33223429932638154 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 2009 0.31693195980375144 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1884 0.2972124501096405 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1612 0.254302797015255 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1531 0.2415245547334711 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1472 0.23221694615785074 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1388 0.21896543564340815 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1289 0.2033475839656723 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1165 0.18378583034911422 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1109 0.17495149000615248 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1073 0.1692722712142485 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 945 0.1490794932874789 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 891 0.14056066509962295 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 833 0.1314108126015555 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 737 0.11626622915647826 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 722 0.11389988799318494 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 716 0.11295335152786762 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 714 0.11263783937276184 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 673 0.10616984019309343 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 1.5775607755288772E-4 0.0 3 0.0 0.0 0.0 1.5775607755288772E-4 0.0 4 0.0 0.0 0.0 1.5775607755288772E-4 0.0 5 0.0 0.0 0.0 1.5775607755288772E-4 0.0 6 0.0 0.0 0.0 1.5775607755288772E-4 0.0 7 0.0 0.0 0.0 1.5775607755288772E-4 0.0 8 1.5775607755288772E-4 0.0 0.0 1.5775607755288772E-4 0.0 9 1.5775607755288772E-4 0.0 0.0 1.5775607755288772E-4 0.0 10 1.5775607755288772E-4 0.0 0.0 1.5775607755288772E-4 0.0 11 1.5775607755288772E-4 0.0 0.0 3.1551215510577544E-4 0.0 12 1.5775607755288772E-4 0.0 0.0 3.1551215510577544E-4 0.0 13 1.5775607755288772E-4 0.0 0.0 3.1551215510577544E-4 0.0 14 1.5775607755288772E-4 0.0 0.0 3.1551215510577544E-4 0.0 15 1.5775607755288772E-4 0.0 0.0 6.310243102115509E-4 0.0 16 1.5775607755288772E-4 0.0 0.0 0.0012620486204231018 0.0 17 1.5775607755288772E-4 0.0 0.0 0.0025240972408462035 0.0 18 1.5775607755288772E-4 0.0 0.0 0.0026818533183990915 0.0 19 1.5775607755288772E-4 0.0 0.0 0.003628389783716418 0.0 20 1.5775607755288772E-4 0.0 0.0 0.005048194481692407 0.0 21 1.5775607755288772E-4 0.0 0.0 0.007730047800091499 0.0 22 1.5775607755288772E-4 0.0 0.0 0.012304974049125242 0.0 23 1.5775607755288772E-4 0.0 0.0 0.02082380223698118 0.0 24 1.5775607755288772E-4 0.0 0.0 0.03486409313918819 0.0 25 1.5775607755288772E-4 0.0 0.0 0.04085882408619792 0.0 26 1.5775607755288772E-4 0.0 0.0 0.04921989619650097 0.0 27 1.5775607755288772E-4 0.0 0.0 0.1080629131237281 0.0 28 1.5775607755288772E-4 0.0 0.0 0.17148085629998897 0.0 29 1.5775607755288772E-4 0.0 0.0 0.24467967628452886 0.0 30 1.5775607755288772E-4 0.0 0.0 0.3817697076779883 0.0 31 1.5775607755288772E-4 0.0 0.0 0.5702882203536891 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 1665 0.0 29.222221 1 CGACGAA 45 1.3222975E-4 24.666666 10 ATTGGAC 175 0.0 23.257141 3 GTATTGG 180 0.0 21.583332 1 TTGGACC 315 0.0 20.555555 4 TATACCG 45 0.0038239432 20.555555 5 GTGCGAA 45 0.0038239432 20.555555 11 ACGACGC 45 0.0038239432 20.555555 26 AGTGCGA 55 5.139598E-4 20.181818 10 GCTTAGA 55 5.139598E-4 20.181818 1 TGGACCC 350 0.0 18.5 5 CGACGCT 50 0.007031487 18.499998 27 GGACCCT 325 0.0 18.215385 6 CGTCTGT 215 0.0 18.069769 34 TATTGGA 260 0.0 17.788462 2 CTGTACT 75 2.0654239E-4 17.266666 4 GTATCAA 2900 0.0 17.096552 2 CCGAATT 65 0.0015788771 17.076923 14 GACCCTC 365 0.0 16.726027 7 TTAGAAC 90 4.440896E-5 16.444445 3 >>END_MODULE