##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088241_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3113943 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.84188856379195 31.0 30.0 33.0 27.0 34.0 2 30.72483247124305 31.0 31.0 34.0 27.0 34.0 3 30.681884029348 31.0 31.0 34.0 27.0 34.0 4 34.909929308275714 35.0 35.0 37.0 32.0 37.0 5 34.82833404465014 35.0 35.0 37.0 32.0 37.0 6 34.94121536585609 35.0 35.0 37.0 32.0 37.0 7 34.52304554065376 35.0 35.0 37.0 30.0 37.0 8 34.77727819680707 35.0 35.0 37.0 32.0 37.0 9 36.22361616766909 38.0 35.0 39.0 32.0 39.0 10 36.13928096949751 38.0 35.0 39.0 31.0 39.0 11 36.22455260099495 38.0 35.0 39.0 32.0 39.0 12 35.95394520708953 37.0 35.0 39.0 30.0 39.0 13 36.13172688132057 38.0 35.0 39.0 31.0 39.0 14 37.057789432883006 39.0 36.0 40.0 31.0 41.0 15 37.103823673073016 39.0 36.0 40.0 31.0 41.0 16 37.036927779345994 39.0 36.0 40.0 31.0 41.0 17 37.10581471786735 39.0 36.0 40.0 31.0 41.0 18 37.0965383759433 39.0 36.0 40.0 31.0 41.0 19 37.167448151748445 39.0 36.0 40.0 31.0 41.0 20 37.11742154560954 39.0 36.0 40.0 31.0 41.0 21 37.05601098029091 39.0 36.0 40.0 31.0 41.0 22 36.9742435876315 39.0 36.0 40.0 31.0 41.0 23 36.85981342625732 39.0 35.0 40.0 31.0 41.0 24 36.782440783277025 39.0 35.0 40.0 30.0 41.0 25 36.70563398238182 38.0 35.0 40.0 30.0 41.0 26 36.44094095492435 38.0 35.0 40.0 30.0 41.0 27 36.3077413427285 38.0 35.0 40.0 30.0 41.0 28 36.14885885836703 38.0 35.0 40.0 30.0 41.0 29 35.98061942688097 38.0 34.0 40.0 29.0 41.0 30 35.8342647890472 38.0 34.0 40.0 29.0 41.0 31 35.60736500314874 38.0 34.0 40.0 27.0 41.0 32 35.367491954733914 38.0 34.0 40.0 27.0 41.0 33 35.53456277138021 38.0 34.0 40.0 27.0 41.0 34 35.54163804539775 38.0 34.0 40.0 27.0 41.0 35 35.47727077855953 38.0 34.0 40.0 27.0 41.0 36 35.3992253551205 38.0 34.0 40.0 27.0 41.0 37 35.25410612846799 38.0 34.0 40.0 26.0 41.0 38 35.140499681593404 38.0 34.0 40.0 26.0 41.0 39 35.12121641276028 38.0 34.0 40.0 25.0 41.0 40 35.00117343188363 38.0 33.0 40.0 25.0 41.0 41 34.85928547825056 38.0 33.0 40.0 24.0 41.0 42 34.684291909004116 38.0 33.0 40.0 24.0 41.0 43 34.35810482080115 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 6.0 15 7.0 16 28.0 17 112.0 18 253.0 19 594.0 20 1219.0 21 2550.0 22 4557.0 23 7978.0 24 13143.0 25 20618.0 26 31311.0 27 45186.0 28 62989.0 29 83721.0 30 107850.0 31 133639.0 32 161861.0 33 196247.0 34 235372.0 35 281709.0 36 342555.0 37 424165.0 38 503666.0 39 452606.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.159804787692 25.203736869942706 13.269671281715818 22.36678706064947 2 18.126343353105693 23.380100406462162 35.39650533102244 23.09705090940971 3 19.882926566093214 26.91414068915198 31.626622581081286 21.576310163673515 4 13.47006030617773 16.344679398434717 35.76401366370547 34.42124663168208 5 11.701948301558506 40.21746705061718 34.84575665000933 13.234827997814987 6 31.84159119161783 36.510655461580384 15.56258415777039 16.085169189031397 7 24.77636873892682 34.70143801604589 22.076993702196862 18.445199542830423 8 27.271372661606204 34.108556258094644 20.392537692565345 18.227533387733814 9 25.211090890231453 13.854042928852584 23.31102399754909 37.623842183366875 10 15.978487724406001 28.00889418977804 34.29279212882188 21.719825956994075 11 32.05864718782585 21.965463080088494 24.808996182653313 21.166893549432345 12 19.979042647858357 27.229239584668058 32.06201911852593 20.729698648947654 13 30.44663951780749 20.992227539168187 28.575314320140095 19.98581862288423 14 20.83715084059021 22.498388698829746 28.445350476871283 28.219109983708755 15 23.07213073585483 29.237657850513 26.3391141070983 21.35109730653387 16 22.057372276884966 28.51503704467294 26.958489606264468 22.469101072177622 17 19.831673219451996 27.373879354888643 28.037314748535856 24.757132677123504 18 20.873407124022503 26.48664410363324 31.686193356782706 20.953755415561556 19 20.218160704932618 25.372301291321005 32.729404488136105 21.680133515610272 20 23.866204358910874 24.539498635652613 31.5797045739116 20.014592431524918 21 23.35993304951311 25.246480105769436 30.5420490998069 20.85153774491055 22 22.011578246615304 25.002255982206485 31.41509012849625 21.571075642681965 23 21.273928263940604 26.562785510203625 32.142367410064985 20.020918815790782 24 20.19908521125788 25.85323495002959 30.870410922743286 23.077268915969242 25 21.282727397386527 26.565065577629394 31.698814011688718 20.45339301329536 26 22.270960001515764 25.766367592470385 30.597188195159642 21.365484210854213 27 21.19598849433018 26.96086601456738 30.330034942836143 21.513110548266297 28 21.041200818383636 26.535970632731555 30.45312647020193 21.96970207868288 29 20.237525221238794 26.429578190737598 31.246268798112233 22.086627789911375 30 19.761793969896043 26.677077904123486 32.75451734344527 20.8066107825352 31 20.9717711595877 26.190363792786187 31.77562980439912 21.062235243226997 32 21.786782866609954 26.385261387250825 30.12068621679973 21.70726952933949 33 22.508022786544263 26.31133582085478 29.83770094699871 21.34294044560225 34 21.155172076046348 28.46317353914314 29.872190981016672 20.50946340379384 35 20.091761474118183 29.291672968965717 29.976463923713442 20.64010163320266 36 20.919811313180748 26.459090612769725 31.631792874821407 20.989305199228117 37 20.91300322452916 26.60556085965607 30.990002064906136 21.49143385090864 38 21.1717105932896 26.225977803704176 31.391743522601413 21.210568080404812 39 21.902263464681273 25.779469951762124 31.32873658894848 20.989529994608123 40 20.496264703624952 26.42935339535759 30.730106491994235 22.344275409023222 41 21.315322727487303 25.946492919106095 30.66979710290137 22.06838725050523 42 19.250191798629583 27.489199384831387 30.911709045412845 22.34889977112619 43 19.819148905423127 27.12059918887404 30.63354081946908 22.426711086233755 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 304.0 1 428.0 2 552.0 3 1286.0 4 2020.0 5 2020.0 6 3526.5 7 5033.0 8 5446.5 9 5860.0 10 9034.0 11 12208.0 12 12208.0 13 21612.5 14 31017.0 15 49882.5 16 68748.0 17 67400.0 18 66052.0 19 66052.0 20 72255.5 21 78459.0 22 66860.0 23 55261.0 24 61298.0 25 67335.0 26 67335.0 27 74360.5 28 81386.0 29 86593.0 30 91800.0 31 98883.5 32 105967.0 33 105967.0 34 115436.0 35 124905.0 36 134874.5 37 144844.0 38 150210.5 39 155577.0 40 155577.0 41 163528.5 42 171480.0 43 188654.5 44 205829.0 45 246158.5 46 286488.0 47 286488.0 48 290529.0 49 294570.0 50 272202.5 51 249835.0 52 233713.5 53 217592.0 54 217592.0 55 190599.0 56 163606.0 57 139538.5 58 115471.0 59 102998.0 60 90525.0 61 90525.0 62 79972.5 63 69420.0 64 60688.0 65 51956.0 66 43812.5 67 35669.0 68 35669.0 69 30415.0 70 25161.0 71 21074.0 72 16987.0 73 13385.0 74 9783.0 75 9783.0 76 7646.0 77 5509.0 78 4225.0 79 2941.0 80 2340.0 81 1739.0 82 1739.0 83 1300.0 84 861.0 85 720.0 86 579.0 87 454.0 88 329.0 89 329.0 90 273.0 91 217.0 92 132.0 93 47.0 94 31.5 95 16.0 96 16.0 97 10.5 98 5.0 99 2.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3113943.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 44.11502332703306 #Duplication Level Percentage of deduplicated Percentage of total 1 72.62907267000884 32.04033235058219 2 14.44377710766921 12.743751280705865 3 5.459344572213682 7.225173394605537 4 2.583152758781148 4.558233768436805 5 1.328943392872708 2.931318438844298 6 0.8047023234153905 2.129967706127259 7 0.5183934826711231 1.6008258406432954 8 0.37393015900540233 1.3196750149763603 9 0.2431144509558595 0.9652499707550918 >10 1.3881061525485723 11.414686693365224 >50 0.1319304685841078 4.094882524922121 >100 0.08417895612207225 6.962870017479301 >500 0.005381856338305558 1.6608392302196247 >1k 0.004865787922241435 4.187516042879263 >5k 7.372405942790052E-4 2.3935911171050397 >10k+ 3.686202971395026E-4 3.7710866083527548 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 32327 1.038137178490422 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 29421 0.9448149821624866 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 25951 0.833380700931263 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 16682 0.5357195041784644 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11569 0.3715225358974137 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 9779 0.3140391458674741 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9604 0.3084192613673404 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8855 0.28436615570676793 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8687 0.2789710665866395 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7069 0.2270112201796886 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6610 0.2122710659764806 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6467 0.20767881749922845 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6173 0.19823741153900376 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5203 0.16708719459540525 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5149 0.16535305880679255 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4880 0.15671449348944408 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4150 0.13327154671745758 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3872 0.12434395876867368 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3645 0.11705416573135731 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3601 0.1156411661998951 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3448 0.11072778146549248 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3327 0.10684203275397142 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3325 0.10677780550254132 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.211362571505002E-5 0.0 5 0.0 0.0 0.0 6.422725143010004E-5 0.0 6 0.0 0.0 0.0 6.422725143010004E-5 0.0 7 0.0 0.0 0.0 9.634087714515005E-5 0.0 8 0.0 0.0 0.0 9.634087714515005E-5 0.0 9 0.0 0.0 0.0 2.5690900572040016E-4 0.0 10 0.0 0.0 0.0 2.8902263143545015E-4 0.0 11 0.0 0.0 0.0 4.1747713429565026E-4 0.0 12 6.422725143010004E-5 0.0 0.0 4.817043857257503E-4 0.0 13 6.422725143010004E-5 0.0 0.0 5.138180114408003E-4 0.0 14 6.422725143010004E-5 0.0 0.0 6.422725143010004E-4 0.0 15 6.422725143010004E-5 0.0 0.0 8.028406428762505E-4 0.0 16 6.422725143010004E-5 0.0 0.0 0.001412999531462201 0.0 17 6.422725143010004E-5 0.0 0.0 0.0022800674257685513 0.0 18 6.422725143010004E-5 0.0 0.0 0.0026654309343491518 0.0 19 6.422725143010004E-5 0.0 0.0 0.003147135320074902 0.0 20 6.422725143010004E-5 0.0 0.0 0.003757294208660852 0.0 21 6.422725143010004E-5 0.0 0.0 0.005395089120128403 0.0 22 6.422725143010004E-5 0.0 0.0 0.008831247071638754 0.0 23 6.422725143010004E-5 0.0 0.0 0.013937313560331708 0.0 24 6.422725143010004E-5 0.0 0.0 0.023121810514836014 0.0 25 6.422725143010004E-5 0.0 0.0 0.027585604489227967 0.0 26 6.422725143010004E-5 0.0 0.0 0.03484328390082927 0.0 27 6.422725143010004E-5 0.0 0.0 0.08741328919636615 0.0 28 6.422725143010004E-5 0.0 0.0 0.13510202338321542 0.0 29 6.422725143010004E-5 0.0 0.0 0.19473702633606332 0.0 30 9.634087714515005E-5 0.0 0.0 0.3041802627729538 0.0 31 9.634087714515005E-5 0.0 0.0 0.4586146888366293 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7245 0.0 29.773636 1 ATTGGAC 1055 0.0 19.464455 3 GTATTGG 1055 0.0 19.2891 1 TAATCCG 50 0.0070375167 18.5 5 GTATCAA 12330 0.0 18.154907 2 TTGGACC 1775 0.0 17.718311 4 TATTGGA 1265 0.0 17.403162 2 TTAGTAC 140 1.873559E-9 17.178572 3 GACCCTC 1845 0.0 16.344173 7 GGACCCT 1845 0.0 16.243902 6 TGGACCC 1885 0.0 16.095491 5 CGTCTGT 705 0.0 15.482268 34 ACCCTCG 2090 0.0 14.69378 8 CCCTCGC 2085 0.0 14.374101 9 AGTATCA 510 0.0 14.1470585 1 CGGGATA 200 9.858923E-10 13.875001 24 TATACCG 280 0.0 13.875 5 TGCGACG 120 3.3039225E-5 13.874999 22 TAAACGT 275 0.0 13.454546 4 CGATGCG 165 2.5991903E-7 13.454545 33 >>END_MODULE