##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088225_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2347726 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.823571830784342 31.0 30.0 33.0 27.0 34.0 2 30.67698147058047 31.0 31.0 34.0 27.0 34.0 3 30.669286790707265 31.0 30.0 34.0 27.0 34.0 4 34.868658437994895 35.0 35.0 37.0 32.0 37.0 5 34.79345928783853 35.0 35.0 37.0 32.0 37.0 6 34.89955727371934 35.0 35.0 37.0 32.0 37.0 7 34.50331767846844 35.0 35.0 37.0 30.0 37.0 8 34.749015004306294 35.0 35.0 37.0 31.0 37.0 9 36.08613398667477 38.0 35.0 39.0 31.0 39.0 10 36.04278608321414 37.0 35.0 39.0 31.0 39.0 11 36.15301146726662 38.0 35.0 39.0 31.0 39.0 12 35.883253837969164 37.0 35.0 39.0 30.0 39.0 13 36.05395263331411 37.0 35.0 39.0 31.0 39.0 14 36.88828934892743 38.0 36.0 40.0 31.0 41.0 15 36.93526587003765 38.0 36.0 40.0 31.0 41.0 16 36.83805052207966 38.0 36.0 40.0 31.0 41.0 17 37.003987688512204 38.0 36.0 40.0 31.0 41.0 18 37.02415614087845 38.0 36.0 40.0 31.0 41.0 19 37.12778237324117 39.0 36.0 40.0 31.0 41.0 20 37.09432148385289 39.0 36.0 40.0 31.0 41.0 21 37.03449806323225 39.0 36.0 40.0 31.0 41.0 22 36.96851336143996 39.0 36.0 40.0 31.0 41.0 23 36.82465330281302 39.0 35.0 40.0 31.0 41.0 24 36.748650822114676 38.0 35.0 40.0 30.0 41.0 25 36.666381426111904 38.0 35.0 40.0 30.0 41.0 26 36.37882614921843 38.0 35.0 40.0 30.0 41.0 27 36.22119318864297 38.0 35.0 40.0 30.0 41.0 28 36.02779412929788 38.0 34.0 40.0 30.0 41.0 29 35.848025706577346 38.0 34.0 40.0 29.0 41.0 30 35.65161266689554 38.0 34.0 40.0 29.0 41.0 31 35.34575542461088 37.0 34.0 40.0 27.0 41.0 32 35.099756530361724 37.0 33.0 40.0 27.0 41.0 33 35.15668054960417 37.0 33.0 40.0 27.0 41.0 34 35.1025694650909 37.0 33.0 40.0 27.0 41.0 35 34.97698922276279 37.0 33.0 40.0 26.0 41.0 36 34.85921440576967 37.0 33.0 40.0 25.0 41.0 37 34.66851199841889 37.0 33.0 40.0 25.0 41.0 38 34.507894873592576 37.0 33.0 40.0 24.0 41.0 39 34.39815378796333 37.0 33.0 40.0 23.0 41.0 40 34.17514565157944 37.0 33.0 40.0 22.0 41.0 41 33.95612775937226 37.0 33.0 40.0 21.0 41.0 42 33.68882356799729 37.0 33.0 40.0 19.0 41.0 43 33.31646239808223 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 3.0 14 2.0 15 19.0 16 43.0 17 84.0 18 209.0 19 516.0 20 1165.0 21 2316.0 22 4330.0 23 6946.0 24 11424.0 25 18041.0 26 26972.0 27 38505.0 28 53258.0 29 70162.0 30 88995.0 31 106940.0 32 128721.0 33 154968.0 34 183415.0 35 215043.0 36 259700.0 37 322697.0 38 351468.0 39 301784.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.96855936340101 26.063646268772423 14.392735779217848 20.575058588608723 2 18.020331163006244 23.523017592342548 36.019322527415895 22.437328717235317 3 20.44374002758414 26.455472231427347 33.034306388394555 20.066481352593957 4 12.84498276204293 15.940914740476531 34.38591215499594 36.8281903424846 5 10.45952551532845 41.75448923767083 34.221071794579096 13.56491345242162 6 31.49209064430858 35.2285147414988 14.89811843460438 18.381276179588248 7 23.28772608047106 37.06654865175919 20.656371314199358 18.98935395357039 8 28.49122938537121 33.27969277505126 19.81440764382215 18.41467019575538 9 24.71497951634901 13.61078763024305 25.159366978940472 36.51486587446746 10 16.72767605759786 28.653343703651956 32.97650577622772 21.642474462522458 11 30.188616559172576 21.555624463842886 25.825671309173217 22.43008766781132 12 20.238264601576166 28.31552745081837 31.73308980690251 19.713118140702964 13 31.738967835258457 20.788201008124457 30.140910821790957 17.331920334826126 14 20.763198090407485 23.274607002691113 29.473967575432567 26.488227331468835 15 22.92469393787861 28.976550074412433 28.22944415148957 19.86931183621939 16 21.23386630296721 28.390365826335785 28.402973771215212 21.972794099481796 17 18.313252909411066 27.272518172904338 28.58284995778894 25.831378959895662 18 19.618302987656993 26.071654017547193 34.457981893968885 19.85206110082693 19 18.48886965514715 24.173945341151395 36.56261420625746 20.774570797443996 20 24.36613131174592 22.7145757213576 34.759039172373605 18.16025379452287 21 23.46031862321242 23.763846377302976 33.22282923986871 19.553005759615903 22 21.013908778111244 23.64070594268667 34.26724413325916 21.078141145942926 23 20.0810486402587 26.45692044131215 35.47011022581 17.991920692619157 24 18.193179272197863 25.043680565790044 33.49585939756173 23.267280764450366 25 19.697102643153418 26.33872095806751 35.13131430158374 18.83286209719533 26 21.513370810733452 24.83739584602292 33.25456207410916 20.394671269134474 27 19.974307052867328 26.77735817552815 32.69495673685941 20.55337803474511 28 19.609400756306314 26.28262412223573 32.763704111978996 21.34427100947896 29 18.43183574233109 26.096018019138516 33.94966022440438 21.52248601412601 30 17.503873961441837 26.314016201209174 36.86967729624326 19.312432541105736 31 19.450310641020288 25.566313956569036 34.94918061136606 20.03419479104461 32 21.018423785399147 26.138612427514968 32.165550835148565 20.67741295193732 33 22.24829473286065 26.113779887431498 31.43173436763915 20.2061910120687 34 19.88979974664846 29.750788635471093 31.58856697928123 18.770844638599225 35 17.91111909992904 31.124202739161216 31.72853220520623 19.236145955703517 36 19.374492594110215 26.247696707367048 34.787534831577446 19.59027586694529 37 19.280742301273655 26.932146255568156 33.440103316996954 20.34700812616123 38 19.958632310584797 26.367557372538364 33.886492716782115 19.78731760009473 39 21.519461811131283 25.554131955773375 33.5413076312994 19.38509860179595 40 19.081017120396503 26.884909056678673 32.289969102016165 21.74410472090866 41 20.465846525531514 26.22831625155576 32.1061742298718 21.199662993040928 42 17.227010306994938 28.388491672367216 32.668335231624134 21.71616278901371 43 18.072977851759532 28.21321568189814 32.15733011433191 21.556476352010414 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 208.0 1 281.5 2 355.0 3 1060.0 4 1765.0 5 1765.0 6 3225.5 7 4686.0 8 5346.0 9 6006.0 10 9414.5 11 12823.0 12 12823.0 13 24064.0 14 35305.0 15 58887.5 16 82470.0 17 78484.0 18 74498.0 19 74498.0 20 80058.0 21 85618.0 22 66333.0 23 47048.0 24 49976.5 25 52905.0 26 52905.0 27 55898.0 28 58891.0 29 60496.5 30 62102.0 31 65580.0 32 69058.0 33 69058.0 34 73080.5 35 77103.0 36 84019.0 37 90935.0 38 93614.0 39 96293.0 40 96293.0 41 101423.0 42 106553.0 43 127902.0 44 149251.0 45 203007.0 46 256763.0 47 256763.0 48 261285.0 49 265807.0 50 237727.0 51 209647.0 52 191147.5 53 172648.0 54 172648.0 55 145163.5 56 117679.0 57 90709.5 58 63740.0 59 54017.0 60 44294.0 61 44294.0 62 38569.0 63 32844.0 64 28483.5 65 24123.0 66 20558.5 67 16994.0 68 16994.0 69 14381.0 70 11768.0 71 9730.0 72 7692.0 73 6027.0 74 4362.0 75 4362.0 76 3455.5 77 2549.0 78 1979.0 79 1409.0 80 1085.0 81 761.0 82 761.0 83 560.5 84 360.0 85 286.5 86 213.0 87 159.5 88 106.0 89 106.0 90 86.5 91 67.0 92 44.5 93 22.0 94 13.5 95 5.0 96 5.0 97 2.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2347726.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 35.656654526926616 #Duplication Level Percentage of deduplicated Percentage of total 1 71.4695524158527 25.483651396861333 2 14.098751066307283 10.05428592064914 3 5.544706357904451 5.931170371711575 4 2.8290616292278963 4.03499492595053 5 1.570517605055208 2.7999701835954864 6 0.9787022242680059 2.0938348257275363 7 0.6140654907788483 1.5326864743126325 8 0.4504351918448517 1.284880961790543 9 0.322918652157817 1.036277893826286 >10 1.8197301497574234 12.260852598203586 >50 0.17081071815065507 4.2477396818442985 >100 0.10681189607446699 7.369973287140817 >500 0.010813998138202531 2.6311603098827803 >1k 0.010935503735260987 8.047240754775114 >5k 0.0010935503735260987 2.8401592945014187 >10k+ 0.0010935503735260987 8.351121119226839 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 41712 1.7766979621983143 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 37597 1.6014219717292393 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 31846 1.3564615291562985 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 19568 0.8334873831102948 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13837 0.589378828704883 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 13430 0.5720429044956694 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 12550 0.534559825124397 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 11493 0.4895375354704936 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10723 0.45673984102063014 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 9261 0.3944668159742662 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 8499 0.36200987679141433 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 8496 0.361882093566285 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 8267 0.3521279740480789 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6862 0.2922828302791723 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6663 0.28380654301225955 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 6577 0.2801434238918851 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5820 0.24789945675091554 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5110 0.21765742680363892 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4824 0.2054754260079754 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 4824 0.2054754260079754 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4427 0.18856544588252633 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4394 0.1871598304061036 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4245 0.18081326355801317 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3751 0.15977162582004883 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3660 0.15589553465779227 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3658 0.15581034584103937 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 3245 0.13821885518156718 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3161 0.1346409248779457 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3149 0.13412979197742836 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 3085 0.13140374984133582 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2951 0.12569609911889207 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2930 0.12480161654298672 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 2902 0.12360897310844622 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 2891 0.1231404346163053 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2836 0.12079774215560078 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 2737 0.11658089572633262 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 2696 0.11483452498289835 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2681 0.11419560885725165 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2664 0.11347150391485207 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 2614 0.11134178349602977 No Hit GATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGA 2600 0.11074546177875953 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 2585 0.11010654565311284 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2501 0.10652861534949137 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 2497 0.10635823771598561 No Hit CTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTAAA 2456 0.1046118669725513 No Hit CTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTG 2425 0.10329144031288148 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.2594408376445974E-5 0.0 2 4.2594408376445974E-5 0.0 0.0 4.2594408376445974E-5 0.0 3 4.2594408376445974E-5 0.0 0.0 8.518881675289195E-5 0.0 4 4.2594408376445974E-5 0.0 0.0 8.518881675289195E-5 0.0 5 4.2594408376445974E-5 0.0 0.0 8.518881675289195E-5 0.0 6 4.2594408376445974E-5 0.0 0.0 8.518881675289195E-5 0.0 7 4.2594408376445974E-5 0.0 0.0 2.1297204188222986E-4 0.0 8 4.2594408376445974E-5 0.0 0.0 2.1297204188222986E-4 0.0 9 4.2594408376445974E-5 0.0 0.0 3.8334967538801375E-4 0.0 10 4.2594408376445974E-5 0.0 0.0 6.389161256466896E-4 0.0 11 4.2594408376445974E-5 0.0 0.0 7.666993507760275E-4 0.0 12 4.2594408376445974E-5 0.0 0.0 0.0010222658010347033 0.0 13 4.2594408376445974E-5 0.0 0.0 0.0013204266596698253 0.0 14 4.2594408376445974E-5 0.0 0.0 0.001661181926681393 0.0 15 8.518881675289195E-5 0.0 0.0 0.0023000980523280824 0.0 16 8.518881675289195E-5 0.0 0.0 0.003450147078492124 0.0 17 8.518881675289195E-5 0.0 0.0 0.0048983569632912866 0.0 18 8.518881675289195E-5 0.0 0.0 0.005452084272185085 0.0 19 8.518881675289195E-5 0.0 0.0 0.00655953888997268 0.0 20 8.518881675289195E-5 0.0 0.0 0.007794776732889613 0.0 21 8.518881675289195E-5 0.0 0.0 0.010350441235476371 0.0 22 8.518881675289195E-5 0.0 0.0 0.016143280774673023 0.0 23 8.518881675289195E-5 0.0 0.0 0.02611037233476138 0.0 24 8.518881675289195E-5 0.0 0.0 0.039868366240353434 0.0 25 8.518881675289195E-5 0.0 0.0 0.04757795415649015 0.0 26 8.518881675289195E-5 0.0 0.0 0.05839693388410743 0.0 27 8.518881675289195E-5 0.0 0.0 0.1231404346163053 0.0 28 8.518881675289195E-5 0.0 0.0 0.1906951663013486 0.0 29 8.518881675289195E-5 0.0 0.0 0.2701337379234204 0.0 30 8.518881675289195E-5 0.0 0.0 0.4290534755759403 0.0 31 8.518881675289195E-5 0.0 0.0 0.6335492301912574 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8950 0.0 29.68268 1 GTATTGG 790 0.0 25.29114 1 ATTGGAC 880 0.0 24.806818 3 TATTGGA 950 0.0 22.005262 2 ATCACGT 110 1.7571438E-9 20.181818 23 TTGGACC 1705 0.0 19.530792 4 CGTCTGT 870 0.0 19.350576 34 GGACCCT 1730 0.0 18.713875 6 TGGACCC 1780 0.0 18.396069 5 AGTATCA 490 0.0 18.122448 1 ACGTTTA 125 8.591087E-9 17.76 26 GTATCAA 15650 0.0 17.613419 2 ATAACGC 75 2.0684228E-4 17.266666 3 TCACGTT 130 1.3951649E-8 17.076923 24 TTTTTAC 1975 0.0 16.954432 1 CGATCTG 265 0.0 16.754717 33 GACCCTC 1940 0.0 16.402061 7 GCGTCTG 1020 0.0 16.32353 33 GCGCGTG 115 1.2434684E-6 16.086956 33 AACGGTA 70 0.0025935727 15.857143 18 >>END_MODULE