##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088224_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 431919 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.940023476624088 31.0 30.0 33.0 27.0 34.0 2 30.79864511632968 31.0 31.0 34.0 27.0 34.0 3 30.739048293777305 31.0 31.0 34.0 27.0 34.0 4 34.946221397993604 35.0 35.0 37.0 32.0 37.0 5 34.86819287875736 35.0 35.0 37.0 32.0 37.0 6 34.99983330207747 36.0 35.0 37.0 32.0 37.0 7 34.54626446162359 35.0 35.0 37.0 30.0 37.0 8 34.81008013076526 35.0 35.0 37.0 32.0 37.0 9 36.21009957885622 38.0 35.0 39.0 32.0 39.0 10 36.177568016225266 38.0 35.0 39.0 32.0 39.0 11 36.27480615578384 38.0 35.0 39.0 32.0 39.0 12 36.01843169668387 38.0 35.0 39.0 30.0 39.0 13 36.173551059342145 38.0 35.0 39.0 32.0 39.0 14 37.080913319395535 39.0 36.0 40.0 31.0 41.0 15 37.13829213347873 39.0 36.0 40.0 31.0 41.0 16 37.05463987460612 39.0 36.0 40.0 31.0 41.0 17 37.150817630157505 39.0 36.0 40.0 31.0 41.0 18 37.16179885580398 39.0 36.0 40.0 31.0 41.0 19 37.24542333168951 39.0 36.0 40.0 31.0 41.0 20 37.21216709614534 39.0 36.0 40.0 31.0 41.0 21 37.160229117033516 39.0 36.0 40.0 31.0 41.0 22 37.07874161590483 39.0 36.0 40.0 31.0 41.0 23 36.9452073189649 39.0 35.0 40.0 31.0 41.0 24 36.858600802465276 39.0 35.0 40.0 31.0 41.0 25 36.77127887404814 38.0 35.0 40.0 30.0 41.0 26 36.516467207971864 38.0 35.0 40.0 30.0 41.0 27 36.363077336259806 38.0 35.0 40.0 30.0 41.0 28 36.201713747253535 38.0 35.0 40.0 30.0 41.0 29 36.035812270356246 38.0 35.0 40.0 29.0 41.0 30 35.867384856882886 38.0 34.0 40.0 29.0 41.0 31 35.60650492337684 38.0 34.0 40.0 28.0 41.0 32 35.341401975833435 38.0 34.0 40.0 27.0 41.0 33 35.47254925113273 38.0 34.0 40.0 27.0 41.0 34 35.449778777965314 38.0 34.0 40.0 27.0 41.0 35 35.357194288743955 38.0 34.0 40.0 27.0 41.0 36 35.27281272646029 38.0 34.0 40.0 26.0 41.0 37 35.0980994121583 38.0 34.0 40.0 25.0 41.0 38 34.97450447884904 38.0 33.0 40.0 25.0 41.0 39 34.9100271115649 38.0 33.0 40.0 25.0 41.0 40 34.75679467677968 38.0 33.0 40.0 24.0 41.0 41 34.5955375892239 38.0 33.0 40.0 24.0 41.0 42 34.38499348257428 38.0 33.0 40.0 23.0 41.0 43 34.03564557243372 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 15 4.0 16 6.0 17 20.0 18 32.0 19 87.0 20 194.0 21 383.0 22 615.0 23 1130.0 24 1885.0 25 2950.0 26 4356.0 27 6336.0 28 8762.0 29 11848.0 30 15425.0 31 18573.0 32 22324.0 33 27239.0 34 32480.0 35 38484.0 36 46854.0 37 58949.0 38 68219.0 39 64764.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.985087481680594 25.375591256693962 13.787538867241311 21.85178239438413 2 17.921878870806797 23.27589200752919 35.74304441342011 23.059184708243908 3 20.049824156844224 26.895089125507326 31.746924770616715 21.308161947031735 4 13.191825319099182 16.037729296465308 35.51082494634411 35.259620438091396 5 11.321798763194025 40.52287581699346 34.68034515730959 13.474980262502923 6 31.511232430154728 36.16719801629472 15.498507822068488 16.82306173148206 7 24.067707139533105 35.188773821017364 22.144892908161022 18.598626131288505 8 27.566511313463867 33.82161933140242 20.412160613448354 18.199708741685363 9 25.003067704824282 13.843567891201822 23.852852039387017 37.30051236458688 10 16.22526445930834 28.077718275880432 34.083010934920665 21.614006329890557 11 31.27021501716757 21.897392798186697 25.065347900879566 21.767044283766168 12 19.459435681227266 27.68019003563168 32.15093570785263 20.709438575288424 13 30.28692879914984 21.432722339142295 29.059152294758974 19.221196566948894 14 20.603168649677368 22.878595292172836 28.855178864555626 27.66305719359417 15 22.852201454439374 29.10175287496035 27.192135562455 20.853910108145275 16 21.525100771209416 28.56716189841151 27.54636864782517 22.361368682553906 17 19.028799381365488 27.430374676733372 28.607447229688898 24.933378712212242 18 20.068809198020926 26.795764946668243 32.5060948927924 20.629330962518434 19 19.469159726708014 25.386935976421505 33.86653516052778 21.277369136342696 20 23.623179346127397 24.400176885017792 32.69594530455942 19.28069846429539 21 22.865398373306107 25.2906216211836 31.510537855477533 20.33344215003276 22 21.300290100690177 24.853039574549857 32.49428712328006 21.352383201479906 23 20.431840229302253 26.853877694660344 33.251836571208955 19.46244550482845 24 19.35802777835659 26.011821661005886 31.81013106624159 22.82001949439594 25 20.257270460433556 27.042570481965367 32.773274618620626 19.92688443898046 26 21.874471833839216 25.997235592784758 31.40797232814486 20.720320245231168 27 20.538573204698103 27.394719843303957 31.007434264294925 21.059272687703018 28 20.06603089931214 26.785346326510297 31.45450883151702 21.694113942660547 29 19.410583928931118 26.511683903694905 32.396583618687764 21.681148548686213 30 18.641921286167083 26.790208349250673 34.12098101727407 20.446889347308176 31 20.08200611688766 26.453802680595206 33.0298041993985 20.43438700311864 32 21.03380494953915 26.701765840354323 31.153294946506172 21.111134263600352 33 21.99949527573457 26.50473815692294 30.65783167677273 20.83793489056976 34 20.21513293001697 29.016551714557593 30.747663335023468 20.020652020401975 35 19.110990718167066 29.880371088097533 30.846061414292958 20.162576779442443 36 20.12414364730424 26.351237153262534 32.75058517916554 20.77403402026769 37 20.03871096200908 26.74691319437209 32.12014289716359 21.09423294645524 38 20.19962076222625 26.42625121839975 32.578330659220825 20.795797360153177 39 21.125720331821476 25.792567587904212 32.52971043181708 20.55200164845723 40 19.73078285511867 26.48112261789826 31.603147812437054 22.184946714546015 41 20.58557275785506 26.097022821408643 31.37787409213302 21.93953032860328 42 18.39372660151556 27.588506178241758 31.748082395078708 22.269684825163978 43 18.976474755683356 27.231494794162796 31.54341439019816 22.248616059955687 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 50.0 1 62.0 2 74.0 3 195.0 4 316.0 5 316.0 6 558.5 7 801.0 8 901.5 9 1002.0 10 1508.0 11 2014.0 12 2014.0 13 3816.5 14 5619.0 15 8715.5 16 11812.0 17 11322.0 18 10832.0 19 10832.0 20 11517.5 21 12203.0 22 10005.5 23 7808.0 24 8716.5 25 9625.0 26 9625.0 27 10464.0 28 11303.0 29 11831.0 30 12359.0 31 13352.0 32 14345.0 33 14345.0 34 15655.5 35 16966.0 36 18308.0 37 19650.0 38 20522.5 39 21395.0 40 21395.0 41 22478.5 42 23562.0 43 26167.5 44 28773.0 45 35390.5 46 42008.0 47 42008.0 48 42305.5 49 42603.0 50 38671.0 51 34739.0 52 31990.0 53 29241.0 54 29241.0 55 25611.5 56 21982.0 57 18165.5 58 14349.0 59 12593.0 60 10837.0 61 10837.0 62 9616.5 63 8396.0 64 7162.0 65 5928.0 66 5003.5 67 4079.0 68 4079.0 69 3486.0 70 2893.0 71 2354.5 72 1816.0 73 1470.0 74 1124.0 75 1124.0 76 865.0 77 606.0 78 486.0 79 366.0 80 292.5 81 219.0 82 219.0 83 156.0 84 93.0 85 80.0 86 67.0 87 52.5 88 38.0 89 38.0 90 29.5 91 21.0 92 12.0 93 3.0 94 2.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 431919.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 61.14861564425361 #Duplication Level Percentage of deduplicated Percentage of total 1 85.65184304014271 52.37491629283625 2 8.63087693752869 10.55532353051589 3 2.303406958030434 4.225504402467073 4 0.9989537422651663 2.4433855372864577 5 0.5462708580966879 1.6701853369705482 6 0.3580964369489155 1.3138260831939559 7 0.272578239197531 1.1667447387174072 8 0.191775893362212 0.9381464314431416 9 0.14152652627180795 0.7788736042615031 >10 0.8018458518363242 8.703616125487015 >50 0.053697769635856325 2.2742619434625735 >100 0.03998770078903746 5.185904076943271 >500 0.0045700229473185664 1.8895516493923257 >1k 0.003808352456098806 4.087197559586482 >5k 7.616704912197611E-4 2.3925626874361297 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 5269 1.21990465804931 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 5005 1.1587820864560254 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 4313 0.9985668609160513 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2514 0.5820535794905989 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2073 0.47995110194272533 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 1502 0.34775038838300704 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1485 0.3438144652122273 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1312 0.3037606588272338 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1216 0.2815342691569484 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1082 0.2505099335755084 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1033 0.23916521384796685 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1021 0.2363869151391812 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 956 0.2213377971332588 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 906 0.20976155251331846 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 860 0.19911140746297337 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 693 0.16044675043237275 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 692 0.16021522553997392 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 658 0.1523433791984145 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 641 0.1484074560276348 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 586 0.13567358694570048 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 544 0.1259495414649506 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 537 0.12432886721815896 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 529 0.1224766680789685 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 512 0.1185407449081888 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 486 0.11252109770581985 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 475 0.10997432388943297 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 468 0.10835364964264134 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 452 0.10464925136426044 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 2.3152489239880626E-4 0.0 6 0.0 0.0 0.0 2.3152489239880626E-4 0.0 7 0.0 0.0 0.0 2.3152489239880626E-4 0.0 8 0.0 0.0 0.0 2.3152489239880626E-4 0.0 9 0.0 0.0 0.0 2.3152489239880626E-4 0.0 10 0.0 0.0 0.0 4.630497847976125E-4 0.0 11 0.0 0.0 0.0 0.0013891493543928375 0.0 12 0.0 0.0 0.0 0.0016206742467916439 0.0 13 0.0 0.0 0.0 0.0023152489239880625 0.0 14 0.0 0.0 0.0 0.002778298708785675 0.0 15 0.0 0.0 0.0 0.003472873385982094 0.0 16 0.0 0.0 0.0 0.006714221879565382 0.0 17 0.0 0.0 0.0 0.009724045480749862 0.0 18 0.0 0.0 0.0 0.010418620157946281 0.0 19 0.0 0.0 0.0 0.01180776951233912 0.0 20 0.0 0.0 0.0 0.013428443759130763 0.0 21 0.0 0.0 0.0 0.01736436692991047 0.0 22 0.0 0.0 0.0 0.02778298708785675 0.0 23 0.0 0.0 0.0 0.04584192869496364 0.0 24 0.0 0.0 0.0 0.06552154454886217 0.0 25 0.0 0.0 0.0 0.07293034110562398 0.0 26 0.0 0.0 0.0 0.08358048615596905 0.0 27 0.0 0.0 0.0 0.15072270495162288 0.0 28 0.0 0.0 0.0 0.2180964486396755 0.0 29 0.0 0.0 0.0 0.2898691652833054 0.0 30 0.0 0.0 0.0 0.4357298474945534 0.0 31 0.0 0.0 0.0 0.6177084129200151 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position TGACCGA 30 3.595792E-4 30.833332 10 CCTATAG 25 0.005492592 29.6 1 GGTATCA 1170 0.0 29.568377 1 AGGGTAC 35 8.8603975E-4 26.42857 5 TGCGTTC 45 1.3213445E-4 24.666666 32 TACCCTA 70 5.089765E-6 21.142857 5 GGGTAGA 45 0.0038219995 20.555555 1 TGTACTG 75 9.243828E-6 19.733334 5 GTATTGG 115 3.0340743E-9 19.304346 1 GGACGAC 50 0.0070279473 18.5 25 GTGTAGA 75 2.063504E-4 17.266666 1 TCAAGAC 75 2.063504E-4 17.266666 3 GTATCAA 2060 0.0 17.242718 2 TTGGACC 205 0.0 16.243904 4 TATACTG 80 3.376453E-4 16.1875 5 TGGACCC 210 0.0 15.857144 5 GCGTTCT 70 0.0025889825 15.857142 33 TTTGGAC 130 2.5778354E-7 15.653846 3 ATTGGAC 130 2.5778354E-7 15.653846 3 TAATACT 95 7.043378E-5 15.578948 4 >>END_MODULE