##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088223_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 856228 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.7459555165213 31.0 30.0 31.0 26.0 34.0 2 30.572513395964627 31.0 30.0 34.0 27.0 34.0 3 30.573521305072948 31.0 30.0 34.0 27.0 34.0 4 34.73539290936526 35.0 35.0 37.0 32.0 37.0 5 34.57064239898718 35.0 35.0 37.0 30.0 37.0 6 34.688911131147314 35.0 35.0 37.0 31.0 37.0 7 34.28281135398515 35.0 35.0 37.0 30.0 37.0 8 34.508321381688056 35.0 35.0 37.0 30.0 37.0 9 35.94570605025764 37.0 35.0 39.0 30.0 39.0 10 35.80073882190258 37.0 35.0 39.0 30.0 39.0 11 35.92301232849194 37.0 35.0 39.0 30.0 39.0 12 35.646929322563615 37.0 35.0 39.0 30.0 39.0 13 35.8384787696735 37.0 35.0 39.0 30.0 39.0 14 36.69723484866181 38.0 36.0 40.0 31.0 41.0 15 36.75597387611711 38.0 36.0 40.0 31.0 41.0 16 36.66261322918662 38.0 35.0 40.0 30.0 41.0 17 36.71415323955769 38.0 36.0 40.0 31.0 41.0 18 36.701582989577545 38.0 36.0 40.0 31.0 41.0 19 36.779768940048676 39.0 35.0 40.0 30.0 41.0 20 36.74622997612786 39.0 35.0 40.0 30.0 41.0 21 36.67862064777139 38.0 35.0 40.0 30.0 41.0 22 36.60011352116492 38.0 35.0 40.0 30.0 41.0 23 36.47684612042587 38.0 35.0 40.0 30.0 41.0 24 36.393895084019675 38.0 35.0 40.0 30.0 41.0 25 36.28953619830232 38.0 35.0 40.0 30.0 41.0 26 36.02452968134656 38.0 34.0 40.0 29.0 41.0 27 35.87643828512966 38.0 34.0 40.0 29.0 41.0 28 35.72791008936872 38.0 34.0 40.0 27.0 41.0 29 35.54321045329048 38.0 34.0 40.0 27.0 41.0 30 35.36944482077204 38.0 34.0 40.0 27.0 41.0 31 35.162253511915054 38.0 33.0 40.0 27.0 41.0 32 34.89100683462816 37.0 33.0 40.0 26.0 41.0 33 35.08233788196602 37.0 33.0 40.0 26.0 41.0 34 35.086795806724375 38.0 33.0 40.0 26.0 41.0 35 35.024911588969296 38.0 33.0 40.0 26.0 41.0 36 34.951591164970075 38.0 33.0 40.0 25.0 41.0 37 34.8003242127097 37.0 33.0 40.0 25.0 41.0 38 34.68457583727699 37.0 33.0 40.0 25.0 41.0 39 34.67393264410881 38.0 33.0 40.0 24.0 41.0 40 34.55756410675661 38.0 33.0 40.0 24.0 41.0 41 34.42659315042255 38.0 33.0 40.0 24.0 41.0 42 34.267698556926426 37.0 33.0 40.0 23.0 41.0 43 33.9050836926613 37.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 0.0 15 10.0 16 13.0 17 55.0 18 118.0 19 254.0 20 517.0 21 926.0 22 1760.0 23 2884.0 24 4838.0 25 7015.0 26 10498.0 27 14935.0 28 19929.0 29 26240.0 30 33265.0 31 40383.0 32 48247.0 33 57083.0 34 67756.0 35 79878.0 36 95377.0 37 115072.0 38 134795.0 39 94379.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 37.942347131838716 26.106597775358896 13.995220899106311 21.955834193696074 2 18.981626389232776 24.868843345464057 33.66217876546901 22.48735149983416 3 20.427386163498507 26.79169566984495 31.676726292529562 21.104191874126986 4 14.917288385803781 18.17740134637036 35.744684826938624 31.16062544088724 5 12.19640095862317 40.26953101276763 34.60865563845144 12.925412390157762 6 31.114492868721882 37.930901582288826 15.687176780016538 15.26742876897275 7 24.488454009913248 34.661094942001434 22.88479236838786 17.965658679697462 8 26.274777278949063 34.90530559617298 20.764796292576275 18.05512083230168 9 25.04321278911692 14.275753654400464 23.33864344543743 37.34239011104519 10 15.932438556085529 28.970554571913087 34.70185511335765 20.395151758643728 11 32.007128942291075 23.511027436617347 23.892234311421724 20.589609309669854 12 19.221632555814573 28.554543883171306 31.77284555048422 20.450978010529905 13 29.284606436603333 22.111049860551162 27.97642683958011 20.62791686326539 14 20.46195639479204 23.686214419523772 28.69913153973007 27.152697645954117 15 23.22290324539725 30.151198045380433 25.641301148759442 20.984597560462866 16 21.62800095301719 28.760680566391194 27.663542888109244 21.947775592482376 17 19.805122000214894 28.789294440265913 28.79910491130867 22.606478648210523 18 20.122444021919396 27.613205828354133 31.27075965747441 20.993590492252064 19 20.22592113315612 27.130040129498216 32.57485155822982 20.069187179115843 20 22.13207229849993 26.526228995080746 31.671937848330117 19.669760858089198 21 21.829349192037633 26.971320722985 30.804762282943326 20.39456780203404 22 21.350855146059228 27.03754140252363 31.114259286078006 20.497344165339136 23 20.885324936815895 27.909738994753734 31.165647467730555 20.039288600699816 24 20.190066197321276 27.59942445236549 30.796937264373508 21.413572085939727 25 20.836973329533723 27.958557767323654 31.23105060801562 19.973418295126997 26 21.164572987568732 27.55574449796082 30.548989287899953 20.730693226570494 27 20.715393563396663 28.050122163722747 30.409657240828373 20.82482703205221 28 20.579682047305155 28.290712286914232 30.597107312538245 20.53249835324236 29 19.973418295126997 27.88439527789327 31.217035649383106 20.92515077759662 30 19.922847652728013 28.28849325179742 31.704873001116525 20.083786094358043 31 20.701845770051904 27.86967957132913 31.097090961753178 20.33138369686579 32 20.66575725157318 28.421985732772114 30.43908865395666 20.47316836169805 33 21.065533946565633 28.30052275795699 30.19312612995604 20.440817165521334 34 20.533315892495924 28.91741452043147 30.420985999056327 20.128283588016277 35 19.973768669092813 29.246649256973612 30.381627323563347 20.39795475037023 36 20.42972198993726 27.976660422223986 31.030636699570675 20.56298088826808 37 20.243439831446764 27.66646267115768 31.15326758760517 20.936829909790383 38 20.41500628337312 27.763983424975592 31.16658179830606 20.654428493345232 39 20.73279547036537 27.39071836006297 31.283957076853362 20.592529092718294 40 20.012193014010286 27.443040872291025 31.266204795918846 21.278561317779843 41 20.171963542420944 27.11964570184577 31.189472897405828 21.518917858327455 42 19.153543215124945 27.99464628580238 30.919801735051877 21.9320087640208 43 19.30829171669228 27.502604446479207 31.18083033958245 22.008273497246062 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 208.0 1 215.0 2 222.0 3 439.5 4 657.0 5 657.0 6 1109.5 7 1562.0 8 1770.0 9 1978.0 10 2987.5 11 3997.0 12 3997.0 13 6803.5 14 9610.0 15 14615.0 16 19620.0 17 18697.5 18 17775.0 19 17775.0 20 20145.5 21 22516.0 22 20016.5 23 17517.0 24 19647.0 25 21777.0 26 21777.0 27 24154.5 28 26532.0 29 28708.0 30 30884.0 31 33323.0 32 35762.0 33 35762.0 34 38554.0 35 41346.0 36 43909.0 37 46472.0 38 47630.0 39 48788.0 40 48788.0 41 50684.5 42 52581.0 43 55472.5 44 58364.0 45 63424.0 46 68484.0 47 68484.0 48 68918.5 49 69353.0 50 63443.5 51 57534.0 52 53190.0 53 48846.0 54 48846.0 55 44571.0 56 40296.0 57 36029.5 58 31763.0 59 27972.5 60 24182.0 61 24182.0 62 21156.0 63 18130.0 64 15689.5 65 13249.0 66 11168.0 67 9087.0 68 9087.0 69 7784.0 70 6481.0 71 5356.5 72 4232.0 73 3424.0 74 2616.0 75 2616.0 76 2133.0 77 1650.0 78 1317.5 79 985.0 80 777.5 81 570.0 82 570.0 83 428.0 84 286.0 85 220.0 86 154.0 87 123.5 88 93.0 89 93.0 90 72.0 91 51.0 92 33.0 93 15.0 94 8.5 95 2.0 96 2.0 97 1.5 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 856228.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 57.58642290863526 #Duplication Level Percentage of deduplicated Percentage of total 1 79.257138803337 45.641351136573704 2 11.967788053215504 13.783642082267614 3 3.9181453957680086 6.768959333346558 4 1.653137978894663 3.8079321111581845 5 0.8590481108299691 2.4734753904559392 6 0.4984891186543087 1.7223723121307932 7 0.32054851187612804 1.292146951734268 8 0.2521103222006842 1.1614505307104717 9 0.16675559092606068 0.8642572183302761 >10 0.9866066917772766 10.614559022440481 >50 0.07783409646186033 3.085016619263608 >100 0.03809614806387599 4.01787680907214 >500 0.002048179997409882 0.8531132514360282 >1k 0.0016385439979279058 1.3756200541266967 >5k 6.144539992229646E-4 2.538227176953315 >10k+ 0.0 0.0 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 8263 0.9650466931705107 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 7785 0.9092204412843308 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 5472 0.6390821136426279 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3036 0.35457845340259836 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 1702 0.1987788299378203 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 1484 0.17331832175542028 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 1236 0.14435407391489183 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1104 0.12893761941912668 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1051 0.12274767935643309 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1040 0.12146297481511933 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1010 0.1179592351569909 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 995 0.11620736532792666 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 905 0.10569614635354135 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 1.1679132193761475E-4 0.0 0.0 0.0 0.0 9 2.335826438752295E-4 0.0 0.0 0.0 0.0 10 2.335826438752295E-4 0.0 0.0 0.0 0.0 11 2.335826438752295E-4 0.0 0.0 0.0 0.0 12 2.335826438752295E-4 0.0 0.0 1.1679132193761475E-4 0.0 13 2.335826438752295E-4 0.0 0.0 2.335826438752295E-4 0.0 14 2.335826438752295E-4 0.0 0.0 2.335826438752295E-4 0.0 15 2.335826438752295E-4 0.0 0.0 3.5037396581284427E-4 0.0 16 2.335826438752295E-4 0.0 0.0 4.67165287750459E-4 0.0 17 2.335826438752295E-4 0.0 0.0 0.0010511218974385327 0.0 18 2.335826438752295E-4 0.0 0.0 0.0012847045413137623 0.0 19 2.335826438752295E-4 0.0 0.0 0.001401495863251377 0.0 20 2.335826438752295E-4 0.0 0.0 0.001401495863251377 0.0 21 2.335826438752295E-4 0.0 0.0 0.0021022437948770654 0.0 22 2.335826438752295E-4 0.0 0.0 0.0033869483361908276 0.0 23 2.335826438752295E-4 0.0 0.0 0.007007479316256885 0.0 24 2.335826438752295E-4 0.0 0.0 0.013664584666700926 0.0 25 2.335826438752295E-4 0.0 0.0 0.01646757639320368 0.0 26 2.335826438752295E-4 0.0 0.0 0.02464296892883671 0.0 27 2.335826438752295E-4 0.0 0.0 0.07416248943038536 0.0 28 2.335826438752295E-4 0.0 0.0 0.12298126200030833 0.0 29 2.335826438752295E-4 0.0 0.0 0.1823112535446166 0.0 30 2.335826438752295E-4 0.0 0.0 0.2693207883881396 0.0 31 2.335826438752295E-4 0.0 0.0 0.41928084575603697 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 2180 0.0 24.18578 1 CGATTAG 45 0.0038250233 20.555555 1 AGCCGTC 60 9.2341914E-4 18.5 12 ACGTTTA 70 1.21873614E-4 18.5 26 TCTAGAC 80 1.6158861E-5 18.5 3 CGGTATA 60 9.2341914E-4 18.5 26 GACTGAT 75 2.0664906E-4 17.266666 11 CGAAGGT 75 2.0664906E-4 17.266666 4 ATTAGAC 110 7.801882E-7 16.818182 3 CATAGGG 80 3.3813057E-4 16.1875 2 TCACGTT 80 3.3813057E-4 16.1875 24 GTATCAA 3440 0.0 15.9723835 2 CGATCTG 70 0.002591769 15.857143 33 AACTGCG 95 7.056312E-5 15.578948 7 GATTAAT 155 7.197741E-9 15.5161295 1 CAGTGCG 85 5.362166E-4 15.235294 9 ATCTCCG 75 0.004103269 14.8 10 AGTACCC 75 0.004103269 14.8 3 TTAGACT 155 1.2086639E-7 14.322581 4 CATACAC 155 1.2086639E-7 14.322581 3 >>END_MODULE