##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088222_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 599920 Sequences flagged as poor quality 0 Sequence length 43 %GC 40 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.2466612214962 31.0 30.0 31.0 26.0 33.0 2 29.946486198159754 31.0 30.0 31.0 26.0 34.0 3 29.76888418455794 31.0 30.0 31.0 26.0 34.0 4 33.86055974129884 35.0 33.0 37.0 28.0 37.0 5 33.58448126416856 35.0 33.0 37.0 28.0 37.0 6 33.982752700360045 35.0 33.0 37.0 30.0 37.0 7 33.55436558207761 35.0 33.0 37.0 28.0 37.0 8 33.91163321776237 35.0 33.0 37.0 29.0 37.0 9 35.085788105080674 37.0 34.0 39.0 29.0 39.0 10 34.9172606347513 37.0 33.0 39.0 28.0 39.0 11 35.208509467929055 37.0 34.0 39.0 29.0 39.0 12 34.82285138018403 37.0 33.0 39.0 27.0 39.0 13 35.12030770769436 37.0 34.0 39.0 29.0 39.0 14 35.71864581944259 38.0 34.0 40.0 27.0 41.0 15 35.863835178023734 38.0 34.0 40.0 29.0 41.0 16 35.60471729563942 38.0 33.0 40.0 27.0 41.0 17 35.8096112815042 38.0 34.0 40.0 28.0 41.0 18 35.85987798373117 38.0 34.0 40.0 29.0 41.0 19 35.977648686491534 38.0 34.0 40.0 29.0 41.0 20 35.955035671422856 38.0 34.0 40.0 29.0 41.0 21 35.96759234564609 38.0 34.0 40.0 29.0 41.0 22 35.854193892519 38.0 34.0 40.0 28.0 41.0 23 35.647768035738096 38.0 34.0 40.0 27.0 41.0 24 35.53401786904921 38.0 34.0 40.0 27.0 41.0 25 35.39915155354047 37.0 33.0 40.0 27.0 41.0 26 35.06655720762768 37.0 33.0 40.0 27.0 41.0 27 34.81577210294706 37.0 33.0 40.0 26.0 41.0 28 34.566003800506735 37.0 33.0 39.0 25.0 41.0 29 34.35471729563942 36.0 33.0 39.0 25.0 40.0 30 34.087274969996 36.0 32.0 39.0 25.0 40.0 31 33.74400253367116 36.0 32.0 39.0 24.0 40.0 32 33.45752100280038 35.0 31.0 39.0 24.0 40.0 33 33.50698426456861 35.0 31.0 39.0 24.0 40.0 34 33.40049673289772 35.0 31.0 39.0 23.0 40.0 35 33.202735364715295 35.0 31.0 39.0 22.0 40.0 36 33.00013001733564 35.0 31.0 39.0 21.0 40.0 37 32.73896019469262 35.0 31.0 39.0 19.0 40.0 38 32.551540205360716 35.0 31.0 39.0 18.0 40.0 39 32.346689558607814 35.0 30.0 39.0 16.0 40.0 40 32.08485631417523 35.0 30.0 39.0 15.0 40.0 41 31.814128550473395 35.0 30.0 39.0 14.0 40.0 42 31.50487231630884 35.0 29.0 39.0 10.0 40.0 43 31.060384717962396 35.0 28.0 38.0 10.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 3.0 14 8.0 15 19.0 16 29.0 17 107.0 18 244.0 19 478.0 20 940.0 21 1575.0 22 2673.0 23 4157.0 24 6257.0 25 8838.0 26 12159.0 27 16322.0 28 20990.0 29 25663.0 30 30914.0 31 35994.0 32 41552.0 33 48189.0 34 54693.0 35 62541.0 36 71329.0 37 74323.0 38 58258.0 39 21664.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.048039738631815 28.037238298439792 14.698126416855581 18.21659554607281 2 24.25973463128417 26.28017068942526 28.553807174289908 20.906287505000666 3 26.735731430857445 24.695459394585946 31.11848246432858 17.45032671022803 4 19.78930524069876 19.048039738631818 30.05884117882384 31.10381384184558 5 10.43922523003067 44.14855314041872 32.80904120549407 12.60318042405654 6 33.08591145486065 35.62875050006667 12.905554073876516 18.379783971196158 7 21.80790772102947 38.55547406320843 21.41768902520336 18.21892919055874 8 28.30344045872783 36.16748899853314 19.463095079343912 16.06597546339512 9 23.958361114815308 13.576643552473664 25.57924389918656 36.88575143352447 10 17.81320842779037 30.85761434857981 32.17412321642886 19.15505400720096 11 31.465695426056804 21.33684491265502 23.771002800373385 23.426456860914787 12 17.623349779970663 30.636918255767437 32.649519935991464 19.090212028270436 13 31.458861181490867 20.514401920256034 31.695392719029204 16.331344179223898 14 19.757967729030536 23.95986131484198 31.717895719429258 24.564275236698226 15 24.47826376850247 29.04003867182291 28.69432591012135 17.787371649553275 16 20.34854647286305 27.388985198026404 31.54253900520069 20.719929323909856 17 17.452993732497664 28.639485264701957 32.020269369249235 21.88725163355114 18 18.07040938791839 24.632617682357647 36.318009067875714 20.978963861848246 19 17.881550873449793 24.69662621682891 39.43909187891719 17.982731030804107 20 21.33601146819576 23.059907987731698 38.92669022536338 16.67739031870916 21 21.463361781570875 22.90438725163355 36.938091745566076 18.694159221229498 22 19.812641685558074 23.07057607681024 37.5446726230164 19.572109614615282 23 19.0840445392719 25.937958394452593 38.07774369915989 16.900253367115614 24 17.544672623016403 24.714961994932658 37.03560474729964 20.704760634751302 25 18.407454327243634 25.764768635818108 38.292105614081876 17.53567142285638 26 19.598279770636083 24.394919322576346 36.89058541138818 19.116215495399384 27 20.246199493265767 25.11701560208028 36.32484331244166 18.311941592212293 28 18.936191492198958 26.06297506334178 36.824076543539135 18.17675690092012 29 17.92455660754767 24.74179890652087 37.53817175623416 19.795472729697295 30 17.262468329110547 25.579743965862118 39.13105080677424 18.0267368982531 31 18.542472329643953 24.32857714361915 37.502833711161486 19.626116815575408 32 18.957360981464195 26.36334844645953 36.03763835178024 18.64165222029604 33 20.29370582744366 25.953627150286707 34.788138418455794 18.96452860381384 34 19.586611548206427 27.32714361914922 35.18852513668489 17.89771969595946 35 17.852880384051208 27.940392052273637 35.19102547006268 19.015702093612482 36 19.243065742098945 24.763635151353512 37.25046672889719 18.742832377650352 37 18.355780770769435 25.32954393919189 36.820909454593945 19.493765835444727 38 19.666455527403652 25.210361381517536 35.64725296706228 19.475930124016536 39 20.535238031737567 25.25870116015469 35.11234831310841 19.09371249499933 40 19.518935858114414 25.78760501400187 34.073876516868914 20.619582611014803 41 19.398753167088945 25.978630484064542 33.904353913855175 20.718262434991335 42 17.937725030004 26.831077476996935 33.154753967195624 22.07644352580344 43 18.38795172689692 26.45486064808641 33.24926656887585 21.907921056140818 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 63.0 1 79.0 2 95.0 3 214.0 4 333.0 5 333.0 6 799.0 7 1265.0 8 1451.5 9 1638.0 10 2773.5 11 3909.0 12 3909.0 13 7945.0 14 11981.0 15 19526.5 16 27072.0 17 24280.0 18 21488.0 19 21488.0 20 25872.0 21 30256.0 22 22858.5 23 15461.0 24 15320.5 25 15180.0 26 15180.0 27 15822.5 28 16465.0 29 16758.0 30 17051.0 31 17506.5 32 17962.0 33 17962.0 34 19579.5 35 21197.0 36 22573.5 37 23950.0 38 24710.0 39 25470.0 40 25470.0 41 27074.0 42 28678.0 43 32833.5 44 36989.0 45 46260.5 46 55532.0 47 55532.0 48 57485.5 49 59439.0 50 53027.5 51 46616.0 52 41813.0 53 37010.0 54 37010.0 55 31566.0 56 26122.0 57 21773.0 58 17424.0 59 15115.0 60 12806.0 61 12806.0 62 11089.0 63 9372.0 64 8178.5 65 6985.0 66 5811.5 67 4638.0 68 4638.0 69 3808.0 70 2978.0 71 2485.0 72 1992.0 73 1572.5 74 1153.0 75 1153.0 76 899.5 77 646.0 78 495.5 79 345.0 80 265.5 81 186.0 82 186.0 83 136.5 84 87.0 85 68.0 86 49.0 87 34.0 88 19.0 89 19.0 90 17.0 91 15.0 92 8.0 93 1.0 94 1.5 95 2.0 96 2.0 97 1.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 599920.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 53.54384029303074 #Duplication Level Percentage of deduplicated Percentage of total 1 84.26379442394636 45.118071511205585 2 9.088928506857469 9.733122728119014 3 2.6507832655394434 4.257993474644474 4 1.1722223875208375 2.5106115322132365 5 0.6257081470261605 1.6751408547208464 6 0.39335715755940304 1.2637111693488725 7 0.2936285308116259 1.1005399411478465 8 0.22704060910818313 0.9725300891296782 9 0.16657144603633817 0.8026987413553991 >10 0.977315214106158 9.68710191105851 >50 0.07126701143023155 2.569435068663463 >100 0.05462757561113479 5.821531175068536 >500 0.008476692767245036 3.1245069432300183 >1k 0.005337176927524653 5.505499913796004 >5k 3.1395158397203845E-4 1.2084833708979719 >10k+ 6.279031679440769E-4 4.649021575400516 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 15702 2.6173489798639817 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 11954 1.9925990132017604 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 7189 1.1983264435258034 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4895 0.8159421256167488 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 3276 0.546072809707961 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 3252 0.5420722763035071 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 2126 0.35438058407787704 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 1998 0.33304440592078943 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 1900 0.31670889451926926 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 1825 0.30420722763035074 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 1767 0.2945392719029204 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1750 0.29170556074143217 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 1625 0.2708694492599013 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1456 0.24269902653687156 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1406 0.23436458194425924 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1138 0.18969195892785706 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1122 0.1870249366582211 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1105 0.1841912254967329 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 1066 0.17769035871449526 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1044 0.17402320309374583 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 994 0.1656887585011335 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 874 0.14568609147886386 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 859 0.14318575810108014 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 820 0.1366848913188425 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 806 0.13435124683291105 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 775 0.1291838911854914 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 767 0.12785038005067342 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 767 0.12785038005067342 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 739 0.12318309107881051 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC 723 0.12051606880917455 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 717 0.11951593545806106 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 703 0.11718229097212962 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 701 0.11684891318842514 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCCC 693 0.11551540205360716 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 679 0.11318175756767569 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 662 0.11034804640618749 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 661 0.11018135751433525 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 621 0.10351380184024538 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 602 0.10034671289505268 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 0.0 0.0 11 0.0 0.0 0.0 1.6668889185224696E-4 0.0 12 0.0 0.0 0.0 1.6668889185224696E-4 0.0 13 0.0 0.0 0.0 1.6668889185224696E-4 0.0 14 0.0 0.0 0.0 3.333777837044939E-4 0.0 15 0.0 0.0 0.0 0.0011668222429657288 0.0 16 0.0 0.0 0.0 0.0018335778103747166 0.0 17 0.0 0.0 0.0 0.0033337778370449394 0.0 18 0.0 0.0 0.0 0.004167222296306174 0.0 19 0.0 0.0 0.0 0.005000666755567409 0.0 20 0.0 0.0 0.0 0.00600080010668089 0.0 21 0.0 0.0 0.0 0.008334444592612348 0.0 22 0.0 0.0 0.0 0.015002000266702228 0.0 23 0.0 0.0 0.0 0.021002800373383118 0.0 24 0.0 0.0 0.0 0.03600480064008534 0.0 25 0.0 0.0 0.0 0.04167222296306174 0.0 26 0.0 0.0 0.0 0.05000666755567409 0.0 27 0.0 0.0 0.0 0.10368049073209762 0.0 28 0.0 0.0 0.0 0.15352046939591946 0.0 29 0.0 0.0 0.0 0.20502733697826378 0.0 30 0.0 0.0 0.0 0.31087478330444057 0.0 31 0.0 0.0 0.0 0.4567275636751567 0.0 >>END_MODULE >>Kmer Content warn #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTCGCG 35 2.3864186E-5 31.714287 7 GGTATCA 3020 0.0 31.67053 1 GTCGCGT 35 8.8644313E-4 26.428572 8 TATTGTG 35 8.8644313E-4 26.428572 5 CGCGTAA 35 8.8644313E-4 26.428572 10 GCGTAAC 35 8.8644313E-4 26.428572 11 CGTAACT 40 0.0019301164 23.125002 12 GTATCAA 4275 0.0 23.022224 2 ATACCGT 60 3.7224647E-5 21.583334 6 CGGGGGT 45 0.003823709 20.555555 3 TCGCGTA 45 0.003823709 20.555555 9 GTATTGG 100 1.2867531E-8 20.349998 1 GTTGACT 55 5.1391555E-4 20.181818 4 TAGTCCT 85 1.2432774E-6 19.588236 4 ATTGGAC 115 3.0413503E-9 19.304348 3 TCGTTCG 50 0.007031059 18.499998 37 AAGCGGG 50 0.007031059 18.499998 25 TCAGTAC 50 0.007031059 18.499998 3 GTGGTAT 320 0.0 17.921875 1 TATGAGT 65 0.0015787437 17.076923 4 >>END_MODULE