##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088221_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1764167 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.811250295465225 31.0 30.0 31.0 26.0 34.0 2 30.5724758483749 31.0 30.0 33.0 27.0 34.0 3 30.538457526980157 31.0 30.0 34.0 27.0 34.0 4 34.697166424720564 35.0 35.0 37.0 32.0 37.0 5 34.57711089709761 35.0 35.0 37.0 30.0 37.0 6 34.70788026303632 35.0 35.0 37.0 31.0 37.0 7 34.28508128765587 35.0 35.0 37.0 30.0 37.0 8 34.549384497045914 35.0 35.0 37.0 30.0 37.0 9 35.901708284986626 37.0 35.0 39.0 30.0 39.0 10 35.80203121359826 37.0 35.0 39.0 30.0 39.0 11 35.932349941927264 37.0 35.0 39.0 30.0 39.0 12 35.65784815156388 37.0 35.0 39.0 30.0 39.0 13 35.83410810881283 37.0 35.0 39.0 30.0 39.0 14 36.6444389901863 38.0 35.0 40.0 30.0 41.0 15 36.69789084593465 38.0 35.0 40.0 31.0 41.0 16 36.60081726956688 38.0 35.0 40.0 30.0 41.0 17 36.713218759901984 38.0 36.0 40.0 31.0 41.0 18 36.714936284376705 38.0 36.0 40.0 31.0 41.0 19 36.81574590160682 39.0 36.0 40.0 31.0 41.0 20 36.77701544128192 39.0 35.0 40.0 30.0 41.0 21 36.72923991889657 38.0 35.0 40.0 30.0 41.0 22 36.63210058911656 38.0 35.0 40.0 30.0 41.0 23 36.47839518594328 38.0 35.0 40.0 30.0 41.0 24 36.40082373154016 38.0 35.0 40.0 30.0 41.0 25 36.30632474136519 38.0 35.0 40.0 30.0 41.0 26 36.02478960325185 38.0 34.0 40.0 29.0 41.0 27 35.85107362284863 38.0 34.0 40.0 29.0 41.0 28 35.664176917491375 38.0 34.0 40.0 27.0 41.0 29 35.47744856354302 38.0 34.0 40.0 27.0 41.0 30 35.29772068063851 38.0 34.0 40.0 27.0 41.0 31 35.025586013115536 37.0 33.0 40.0 26.0 41.0 32 34.78635185897934 37.0 33.0 40.0 25.0 41.0 33 34.9047369098277 37.0 33.0 40.0 26.0 41.0 34 34.86200172659391 37.0 33.0 40.0 25.0 41.0 35 34.75263849737581 37.0 33.0 40.0 25.0 41.0 36 34.64884163460715 37.0 33.0 40.0 25.0 41.0 37 34.46870676075451 37.0 33.0 40.0 24.0 41.0 38 34.33615808480717 37.0 33.0 40.0 24.0 41.0 39 34.257670617350854 37.0 33.0 40.0 23.0 41.0 40 34.08597712121358 37.0 33.0 40.0 23.0 41.0 41 33.9086651093689 37.0 33.0 40.0 21.0 41.0 42 33.67753959800858 37.0 32.0 40.0 20.0 41.0 43 33.31482903829399 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 2.0 13 0.0 14 1.0 15 9.0 16 31.0 17 98.0 18 246.0 19 557.0 20 1135.0 21 2086.0 22 3925.0 23 6526.0 24 10431.0 25 15692.0 26 23332.0 27 32220.0 28 43446.0 29 56678.0 30 70791.0 31 85128.0 32 101357.0 33 119852.0 34 140324.0 35 163599.0 36 196617.0 37 238809.0 38 266978.0 39 184297.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.00277014591022 25.95105792138726 13.971693156033412 21.074478776669103 2 19.006137174088394 23.948809834896583 34.60358344759878 22.441469543416243 3 21.154913338703196 26.709772940997084 32.07139686889053 20.063916851409193 4 13.966364862283445 16.572920817586997 34.69824568762481 34.76246863250474 5 10.858665874602574 41.53144231810254 34.416242906708945 13.193648900585941 6 31.824368101205835 36.149582210754424 14.839298093661203 17.186751594378535 7 23.801034709299064 35.913266714545735 21.447799443023253 18.837899133131955 8 27.937094390723782 33.93488258197778 20.14826260779167 17.97976041950677 9 24.833079861487036 13.50246320217984 24.00787453795474 37.65658239837838 10 16.309793800700273 28.277878454817483 33.68428272380109 21.72804502068115 11 31.208723437180268 21.463444220416775 25.24432210782766 22.0835102345753 12 19.640544234190983 27.733768968584037 32.10126932427599 20.52441747294899 13 31.072908630532144 20.62395453491648 29.741515400752878 18.5616214337985 14 20.570501545488607 22.6379362044523 29.00921511398864 27.782347136070452 15 23.11385486748137 28.827996442513665 27.561959837135603 20.49618885286937 16 21.397747492159187 28.400485895042817 27.896508663862324 22.305257948935672 17 18.909831098756523 27.07912572902679 28.72987647994776 25.28116669226893 18 20.037785538443924 25.93399604459215 33.40517082566446 20.62304759129946 19 19.266259940243753 24.52687302279206 34.8656334689403 21.341233568023892 20 24.059627008100705 23.307260593809996 33.60118401489201 19.031928383197283 21 23.42402958450079 24.12350984912426 32.241675532985255 20.210785033389698 22 21.52914094867436 23.777340807304522 33.2338718500006 21.45964639402052 23 20.521923378002196 26.161242104630684 34.34119332240088 18.975641194966236 24 19.341876364312448 24.800599943202656 32.699285271745815 23.15823842073908 25 20.26758237740531 26.233967645920142 33.711604400263695 19.78684557641085 26 21.917822972541714 24.895602287085065 32.242639160578335 20.943935579794886 27 20.745768399476923 26.543688891131055 31.82159058637873 20.888952123013297 28 20.322509150210834 25.93399604459215 32.203867320950906 21.539627484246108 29 19.41482864150616 25.646098130165683 33.17503388284669 21.764039345481464 30 18.664672902281925 25.90769467969869 35.11674348290156 20.31088893511782 31 20.121451087113634 25.3589937914041 33.83687598736401 20.682679134118256 32 21.262556209247762 25.9283276469858 31.560844296486675 21.248271847279764 33 22.37191830478634 25.742347521521484 31.065766449548143 20.81996772414403 34 20.514894564970323 28.72454818619779 31.141609609521094 19.61894763931079 35 19.138324206268454 29.713570200553573 31.181458444693728 19.966647148484242 36 20.321035366833186 25.689404687878188 33.55079196017157 20.438767985117053 37 20.280449639971724 26.277047467728394 32.59334292048315 20.84915997181673 38 20.760279497349174 25.63782226966041 33.00141086416422 20.600487368826194 39 21.705258062303624 25.24857340603242 32.83062204428492 20.21554648737903 40 19.93490412188869 26.22586183734306 31.601486707324195 22.237747333444055 41 21.07975038644301 25.800221861082314 31.436422969027312 21.68360478344737 42 18.585201967840913 27.603509191590135 31.667240119557842 22.144048721011107 43 19.393345414578096 27.348487983280496 31.225048422286548 22.033118179854856 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 141.0 1 187.5 2 234.0 3 587.0 4 940.0 5 940.0 6 1867.0 7 2794.0 8 3241.0 9 3688.0 10 5818.5 11 7949.0 12 7949.0 13 15398.0 14 22847.0 15 37236.0 16 51625.0 17 49237.0 18 46849.0 19 46849.0 20 51339.5 21 55830.0 22 44696.0 23 33562.0 24 35627.0 25 37692.0 26 37692.0 27 40814.0 28 43936.0 29 45881.0 30 47826.0 31 50838.5 32 53851.0 33 53851.0 34 58057.0 35 62263.0 36 68400.0 37 74537.0 38 76949.0 39 79361.0 40 79361.0 41 83675.5 42 87990.0 43 101448.0 44 114906.0 45 146856.5 46 178807.0 47 178807.0 48 181796.5 49 184786.0 50 167053.5 51 149321.0 52 139423.5 53 129526.0 54 129526.0 55 110502.5 56 91479.0 57 74990.0 58 58501.0 59 50773.5 60 43046.0 61 43046.0 62 37521.5 63 31997.0 64 27779.0 65 23561.0 66 19925.5 67 16290.0 68 16290.0 69 13622.5 70 10955.0 71 9234.5 72 7514.0 73 5903.5 74 4293.0 75 4293.0 76 3286.5 77 2280.0 78 1809.5 79 1339.0 80 1058.5 81 778.0 82 778.0 83 587.5 84 397.0 85 306.0 86 215.0 87 183.0 88 151.0 89 151.0 90 119.0 91 87.0 92 51.5 93 16.0 94 11.0 95 6.0 96 6.0 97 3.0 98 0.0 99 0.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1764167.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 46.09007140044527 #Duplication Level Percentage of deduplicated Percentage of total 1 77.76277835476824 35.840920066682685 2 12.591665475521568 11.607015216346213 3 4.079749662626528 5.641078597391975 4 1.7989344514767251 3.316520692531324 5 0.9244277581362601 2.130347068852689 6 0.553591108806922 1.530903223893762 7 0.36457295818833163 1.1762235571500226 8 0.242094008564468 0.892650411228507 9 0.1924512176651577 0.7983081326960776 >10 1.278965370238792 11.437163276282208 >50 0.1259975682412346 3.9799981668848723 >100 0.07022925602401618 6.045403402613523 >500 0.006339173477216114 2.0281386403244577 >1k 0.006836363553860515 6.019106671496793 >5k 8.70082634127702E-4 2.874122576307489 >10k+ 4.971900766444011E-4 4.682100299317476 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 26226 1.4865939562411041 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 23291 1.3202264864947593 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 19567 1.1091353596343203 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12644 0.7167121933467749 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 9033 0.5120263557815105 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 7881 0.4467264153563693 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7799 0.4420783293191631 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 7342 0.41617375225814796 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6929 0.3927632701439263 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 5629 0.3190741012613885 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5556 0.3149361710087537 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4984 0.2825129367004371 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 4952 0.2806990494664054 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4575 0.25932919049046943 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3789 0.21477558530456584 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3591 0.2035521580439947 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3177 0.18008499195370958 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 3121 0.17691068929415413 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2803 0.15888518490596412 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2766 0.15678787779161496 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2758 0.15633440598310705 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2659 0.15072269235282149 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2459 0.13938589714012337 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2431 0.13779874581034562 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2427 0.13757200990609167 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2207 0.12510153517212372 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2195 0.12442132745936184 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2044 0.11586204707377476 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1984 0.11246100850996534 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1960 0.11110059308444153 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1845 0.10458193583714012 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1829 0.10367499222012429 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 1827 0.1035616242679973 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 5.668397606349059E-5 0.0 3 0.0 0.0 0.0 1.1336795212698118E-4 0.0 4 0.0 0.0 0.0 1.1336795212698118E-4 0.0 5 5.668397606349059E-5 0.0 0.0 1.1336795212698118E-4 0.0 6 5.668397606349059E-5 0.0 0.0 1.1336795212698118E-4 0.0 7 5.668397606349059E-5 0.0 0.0 1.1336795212698118E-4 0.0 8 2.2673590425396236E-4 0.0 0.0 1.1336795212698118E-4 0.0 9 2.2673590425396236E-4 0.0 0.0 2.834198803174529E-4 0.0 10 2.2673590425396236E-4 0.0 0.0 3.401038563809435E-4 0.0 11 2.2673590425396236E-4 0.0 0.0 5.668397606349058E-4 0.0 12 2.2673590425396236E-4 0.0 0.0 6.80207712761887E-4 5.668397606349059E-5 13 3.401038563809435E-4 0.0 0.0 9.069436170158494E-4 5.668397606349059E-5 14 3.401038563809435E-4 0.0 0.0 9.6362759307934E-4 5.668397606349059E-5 15 3.401038563809435E-4 0.0 0.0 0.001643835305841227 5.668397606349059E-5 16 3.401038563809435E-4 0.0 0.0 0.002494094946793586 5.668397606349059E-5 17 4.534718085079247E-4 0.0 0.0 0.0037978263962538694 5.668397606349059E-5 18 4.534718085079247E-4 0.0 0.0 0.004364666156888775 5.668397606349059E-5 19 6.80207712761887E-4 0.0 0.0 0.005214925797841134 5.668397606349059E-5 20 6.80207712761887E-4 0.0 0.0 0.006632025199428399 5.668397606349059E-5 21 7.935756648888683E-4 0.0 0.0 0.00957959195472991 5.668397606349059E-5 22 7.935756648888683E-4 0.0 0.0 0.01632498510628529 5.668397606349059E-5 23 8.502596409523588E-4 0.0 0.0 0.027888516223237368 5.668397606349059E-5 24 8.502596409523588E-4 0.0 0.0 0.045063760970475014 5.668397606349059E-5 25 8.502596409523588E-4 0.0 0.0 0.051525734241712945 5.668397606349059E-5 26 8.502596409523588E-4 0.0 0.0 0.05872459920177625 5.668397606349059E-5 27 8.502596409523588E-4 0.0 0.0 0.10974017765891778 5.668397606349059E-5 28 8.502596409523588E-4 0.0 0.0 0.15729803357618638 5.668397606349059E-5 29 8.502596409523588E-4 0.0 0.0 0.21386864168755 5.668397606349059E-5 30 8.502596409523588E-4 0.0 0.0 0.3227018757294519 1.1336795212698118E-4 31 8.502596409523588E-4 0.0 0.0 0.4709871571115433 1.1336795212698118E-4 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5445 0.0 30.578512 1 ATACGTC 45 0.0038266073 20.555555 29 ACGGACC 95 1.6773811E-7 19.473684 8 CGTCTGT 405 0.0 19.185184 34 GTATTGG 630 0.0 18.5 1 GTCGGGT 50 0.0070363395 18.499998 32 GTATCAA 9295 0.0 18.410435 2 ATTGGAC 690 0.0 17.963768 3 TTGGACC 1035 0.0 17.695652 4 GGACTAG 115 6.410664E-8 17.695652 1 CGAACAC 95 3.6086003E-6 17.526316 32 CTAGGAC 140 1.87174E-9 17.178572 3 ACTGCGT 65 0.0015803872 17.076923 8 GTAGCGA 65 0.0015803872 17.076923 17 GTGTTAC 120 1.042099E-7 16.958334 1 TTATGCG 120 1.042099E-7 16.958334 4 CGGACCA 110 7.8134144E-7 16.818182 9 TATTGGA 795 0.0 16.522013 2 TACCGTC 125 1.659082E-7 16.279999 7 TGGACCC 1165 0.0 16.197424 5 >>END_MODULE