##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088219_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 891539 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 29.52559114071286 31.0 30.0 31.0 26.0 34.0 2 30.207817044459077 31.0 30.0 31.0 27.0 34.0 3 30.092426691373007 31.0 30.0 31.0 26.0 34.0 4 34.20091437390849 35.0 35.0 37.0 30.0 37.0 5 33.99790699004755 35.0 33.0 37.0 30.0 37.0 6 34.285253926076145 35.0 35.0 37.0 30.0 37.0 7 33.85266712953668 35.0 33.0 37.0 29.0 37.0 8 34.17648358624805 35.0 33.0 37.0 30.0 37.0 9 35.40737084973288 37.0 34.0 39.0 30.0 39.0 10 35.27059836978528 37.0 34.0 39.0 30.0 39.0 11 35.50136449443042 37.0 35.0 39.0 30.0 39.0 12 35.15941310475481 37.0 34.0 39.0 29.0 39.0 13 35.39319648383301 37.0 34.0 39.0 30.0 39.0 14 36.07638925498492 38.0 34.0 40.0 29.0 41.0 15 36.17644993657036 38.0 34.0 40.0 30.0 41.0 16 35.98436860305606 38.0 34.0 40.0 29.0 41.0 17 36.15544468609898 38.0 34.0 40.0 30.0 41.0 18 36.163218883301795 38.0 34.0 40.0 30.0 41.0 19 36.275892585742184 38.0 34.0 40.0 30.0 41.0 20 36.25507801677773 38.0 34.0 40.0 30.0 41.0 21 36.22855758413261 38.0 34.0 40.0 29.0 41.0 22 36.127744271422785 38.0 34.0 40.0 29.0 41.0 23 35.9360813155678 38.0 34.0 40.0 29.0 41.0 24 35.84030311629665 38.0 34.0 40.0 28.0 41.0 25 35.72837307173326 38.0 34.0 40.0 27.0 41.0 26 35.414252208820926 38.0 34.0 40.0 27.0 41.0 27 35.18857728041061 37.0 33.0 40.0 27.0 41.0 28 34.97729095418148 37.0 33.0 40.0 26.0 41.0 29 34.76445562112258 37.0 33.0 40.0 26.0 41.0 30 34.52957862751938 37.0 33.0 39.0 25.0 40.0 31 34.23969674910464 36.0 33.0 39.0 25.0 40.0 32 33.98719293267036 36.0 32.0 39.0 24.0 40.0 33 34.07600228369146 36.0 33.0 39.0 24.0 40.0 34 33.986505357589515 36.0 33.0 39.0 24.0 40.0 35 33.828479741211545 36.0 32.0 39.0 24.0 40.0 36 33.68094272937022 36.0 32.0 39.0 23.0 40.0 37 33.46582370485195 36.0 32.0 39.0 22.0 40.0 38 33.29430905434311 36.0 31.0 39.0 21.0 40.0 39 33.14988127272054 36.0 31.0 39.0 20.0 40.0 40 32.92429832009592 36.0 31.0 39.0 18.0 40.0 41 32.69734582558923 36.0 31.0 39.0 16.0 40.0 42 32.436207501859144 36.0 30.0 39.0 15.0 40.0 43 32.01533752309209 35.0 30.0 39.0 14.0 40.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 1.0 14 5.0 15 19.0 16 42.0 17 95.0 18 226.0 19 504.0 20 980.0 21 1832.0 22 3070.0 23 4931.0 24 7542.0 25 10836.0 26 15423.0 27 20722.0 28 26939.0 29 34648.0 30 41708.0 31 48856.0 32 57718.0 33 67213.0 34 77572.0 35 89146.0 36 106035.0 37 120109.0 38 111040.0 39 44326.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 38.61547279479641 27.512761640264756 14.69716972560931 19.17459583932952 2 22.19319625950183 25.359406599150457 30.81749648641282 21.629900654934893 3 24.963013395936688 25.53191728011899 31.3070992968339 18.197970027110426 4 17.127798110907094 18.423871530017195 31.77696096300891 32.6713693960668 5 10.698802856633305 43.11320088072423 33.35580384032555 12.832192422316915 6 32.91869452710425 35.79338649234638 13.396497517214614 17.89142146333475 7 22.452635274508463 37.312781605740184 21.431591887735703 18.80299123201565 8 28.20762748460808 35.0712644090724 19.620454068750778 17.100654037568745 9 24.12838922357855 13.342209370537914 24.674635658114788 37.854765747768745 10 17.268565929252674 29.7598871165479 32.76637365275103 20.205173301448394 11 31.59558920024811 21.141419500436882 24.185481510062935 23.07750978925207 12 18.600308006716475 29.183804634457942 32.15002372302278 20.06586363580281 13 31.308445283941587 20.252507181402045 30.939420485250785 17.49962704940558 14 20.33517322293248 22.982729863752454 30.378256026937688 26.303840886377376 15 24.13388533760161 28.623537500883305 27.88503924113247 19.35753792038262 16 21.024206456475824 27.293253576119497 29.930378816854898 21.752161150549778 17 18.400989749186518 27.6281800347489 30.348980807345498 23.621849408719083 18 19.187046220075622 24.609916111353513 35.12633771489526 21.07669995367561 19 18.782016266254196 24.056378913317307 37.44031388419351 19.721290936234983 20 22.84779465620685 22.645560093276906 36.463015078420575 18.043630172095668 21 22.89086624365283 22.705568685161275 34.788831447642785 19.61473362354311 22 21.063015751414127 22.737311547784227 35.43770939914014 20.76196330166151 23 19.922403843241852 25.70465229227213 36.280072997367476 18.092870867118542 24 18.605579789554916 24.18278953584756 35.09201504364924 22.11961563094828 25 19.450411030813008 25.337534308650543 36.2758107048598 18.936243955676645 26 20.755682028492302 24.01252216672518 34.81945265434266 20.412343150439856 27 20.8532660937996 25.138552547897515 34.22037622582972 19.787805132473174 28 19.82156697575765 25.634548797080104 34.67890916718169 19.86497505998055 29 18.835182757007825 24.711650303576175 35.43423226577861 21.018934673637386 30 18.172844934433602 25.304781955696836 37.136345129040905 19.386027980828658 31 19.479910581589813 24.300226910993235 35.58520715302415 20.634655354392798 32 20.23489718340981 25.831399411579305 33.735372204693235 20.198331200317654 33 21.54364531445063 25.463384103219266 32.85487230508144 20.138098277248666 34 20.34807226604781 27.711070407463943 33.228383727464525 18.71247359902371 35 18.582585843131934 28.47031930179162 33.40818517193303 19.53890968314342 36 19.94730460473406 24.923194610667622 35.50646690722447 19.623033877373842 37 19.32545856098275 25.712503883733635 34.75260196132754 20.20943559395607 38 20.474370722985757 25.384643857419587 34.11572572820707 20.02525969138759 39 21.502817038850797 25.19519617201267 33.69981571193184 19.6021710772047 40 20.049038796956722 26.004246589324755 32.61068781062858 21.33602680308994 41 20.28492303757884 26.00121811833246 32.44019611032159 21.273662733767114 42 18.399419430894216 27.32140713978861 32.1566414929689 22.12253193634827 43 19.16427660483725 26.874539420036587 32.062534561023135 21.898649414103026 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 54.0 1 81.0 2 108.0 3 234.0 4 360.0 5 360.0 6 942.5 7 1525.0 8 1818.0 9 2111.0 10 3452.5 11 4794.0 12 4794.0 13 9882.0 14 14970.0 15 24398.5 16 33827.0 17 30593.5 18 27360.0 19 27360.0 20 31773.0 21 36186.0 22 27672.5 23 19159.0 24 19466.0 25 19773.0 26 19773.0 27 20737.0 28 21701.0 29 22361.0 30 23021.0 31 24321.5 32 25622.0 33 25622.0 34 27709.0 35 29796.0 36 32889.0 37 35982.0 38 37080.0 39 38178.0 40 38178.0 41 40801.0 42 43424.0 43 50406.5 44 57389.0 45 72675.0 46 87961.0 47 87961.0 48 90690.0 49 93419.0 50 83549.0 51 73679.0 52 67395.5 53 61112.0 54 61112.0 55 51780.0 56 42448.0 57 35153.0 58 27858.0 59 24086.5 60 20315.0 61 20315.0 62 17944.5 63 15574.0 64 13519.5 65 11465.0 66 9691.5 67 7918.0 68 7918.0 69 6680.5 70 5443.0 71 4565.0 72 3687.0 73 3003.0 74 2319.0 75 2319.0 76 1835.5 77 1352.0 78 1059.0 79 766.0 80 598.0 81 430.0 82 430.0 83 326.0 84 222.0 85 167.5 86 113.0 87 88.5 88 64.0 89 64.0 90 51.0 91 38.0 92 24.0 93 10.0 94 7.0 95 4.0 96 4.0 97 2.5 98 1.0 99 1.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 891539.0 >>END_MODULE >>Sequence Duplication Levels warn #Total Deduplicated Percentage 50.592687004249214 #Duplication Level Percentage of deduplicated Percentage of total 1 81.99464040118336 41.48329177843037 2 10.2756677807031 10.397472875775202 3 3.1529067908112856 4.785420792632616 4 1.3234151657438409 2.6782051702861893 5 0.7456561604377459 1.8862374368908554 6 0.4505212052825757 1.3675846996583074 7 0.33277836987238135 1.1785306336116363 8 0.2321852794676135 0.9397501736879279 9 0.18225264857274995 0.8298586084442909 >10 1.1586237542238451 10.86081683630348 >50 0.08149789420952502 2.8021823140341127 >100 0.05507762556402385 5.530572625183439 >500 0.007164569177175871 2.544006770541854 >1k 0.006268998030028889 5.81081095872597 >5k 6.71678360360238E-4 1.8814707893806577 >10k+ 6.71678360360238E-4 5.0237875364130975 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 18833 2.112414599922157 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 15243 1.7097401235391834 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 10275 1.1525014609568398 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6510 0.7301980059201 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5064 0.5680065594438382 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5036 0.5648659228592355 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 4322 0.4847796899518697 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3423 0.3839428224676655 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 3248 0.3643138438138993 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3166 0.3551162652447061 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3006 0.33716977047554847 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2691 0.3018376088987694 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 2640 0.2961171636911004 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 2408 0.2700947462758219 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2232 0.25035360202974855 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1537 0.17239851537622022 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1532 0.17183768741468403 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1510 0.1693700443839249 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 1497 0.16791189168393084 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1436 0.16106979055318948 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1369 0.15355469586860473 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1335 0.14974106573015875 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 1332 0.14940456895323706 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 1323 0.14839507862247195 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1287 0.14435711729941147 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1210 0.13572036669175438 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1139 0.12775660963794067 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 1136 0.12742011286101898 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1120 0.12562546338410321 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1109 0.12439164186872365 No Hit GTGGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTT 1102 0.12360648272257298 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 1101 0.12349431713026575 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 1067 0.11968068699181977 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1021 0.11452106974568696 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 984 0.11037094283031926 No Hit TCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 974 0.10924928690724689 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 927 0.10397750406880685 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 919 0.10308017933034898 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTG 901 0.10106119866881876 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 901 0.10106119866881876 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTCC 895 0.10038820511497534 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 1.1216559230723502E-4 0.0 0.0 0.0 0.0 11 2.2433118461447004E-4 0.0 0.0 2.2433118461447004E-4 0.0 12 2.2433118461447004E-4 0.0 0.0 5.608279615361751E-4 0.0 13 2.2433118461447004E-4 0.0 0.0 6.729935538434101E-4 0.0 14 2.2433118461447004E-4 0.0 0.0 0.0011216559230723502 0.0 15 2.2433118461447004E-4 0.0 0.0 0.0015703182923012902 0.0 16 2.2433118461447004E-4 0.0 0.0 0.0021311462538374654 0.0 17 2.2433118461447004E-4 0.0 0.0 0.0032528021769098153 0.0 18 2.2433118461447004E-4 0.0 0.0 0.0037014645461387555 0.0 19 2.2433118461447004E-4 0.0 0.0 0.004598789284596636 0.0 20 2.2433118461447004E-4 0.0 0.0 0.005271782838440046 0.0 21 3.3649677692170507E-4 0.0 0.0 0.007627260276891981 0.0 22 3.3649677692170507E-4 0.0 0.0 0.012899043115332028 0.0 23 3.3649677692170507E-4 0.0 0.0 0.022096621684525298 0.0 24 3.3649677692170507E-4 0.0 0.0 0.03600515513062244 0.0 25 3.3649677692170507E-4 0.0 0.0 0.03981878526906843 0.0 26 3.3649677692170507E-4 0.0 0.0 0.04834337028441829 0.0 27 3.3649677692170507E-4 0.0 0.0 0.0893959770688663 0.0 28 3.3649677692170507E-4 0.0 0.0 0.1284296031917841 0.0 29 3.3649677692170507E-4 0.0 0.0 0.1732958401146781 0.0 30 3.3649677692170507E-4 0.0 0.0 0.2761516882604126 0.0 31 3.3649677692170507E-4 0.0 0.0 0.40054333012913623 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4020 0.0 30.465174 1 TACGTTT 35 8.867827E-4 26.428572 4 CGTCTGT 230 0.0 23.326088 34 GTACGTT 40 0.0019308489 23.125002 3 TGCGTCT 240 0.0 21.583334 32 GTATCAA 6055 0.0 20.806772 2 GTATGCA 45 0.0038251444 20.555557 9 CCTATAG 45 0.0038251444 20.555557 3 CGACCGC 65 6.8999114E-5 19.923077 36 GGACTGC 95 1.6750528E-7 19.473684 6 ACGTTTT 50 0.0070336736 18.5 5 CGTTGGG 50 0.0070336736 18.5 12 GCTGCGT 70 1.21880774E-4 18.5 8 AGTATAC 50 0.0070336736 18.5 2 TATACCG 60 9.234599E-4 18.5 31 CGATCTG 70 1.21880774E-4 18.5 33 AGTACGT 50 0.0070336736 18.5 2 TTGGACC 385 0.0 17.77922 4 GCGTCTG 310 0.0 17.306452 33 TAAACGT 65 0.0015795584 17.076923 4 >>END_MODULE