##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088213_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2186104 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.391846408039143 31.0 30.0 33.0 27.0 34.0 2 30.781972403874654 31.0 31.0 34.0 27.0 34.0 3 30.969404017375204 31.0 31.0 34.0 27.0 34.0 4 35.02120576148253 35.0 35.0 37.0 32.0 37.0 5 34.86375991261166 35.0 35.0 37.0 32.0 37.0 6 34.91448073833633 35.0 35.0 37.0 32.0 37.0 7 34.71255301669088 35.0 35.0 37.0 31.0 37.0 8 34.84498541697925 35.0 35.0 37.0 32.0 37.0 9 36.28479523389555 38.0 35.0 39.0 32.0 39.0 10 36.15487323567406 38.0 35.0 39.0 31.0 39.0 11 36.2103317134043 38.0 35.0 39.0 32.0 39.0 12 36.03304966277908 38.0 35.0 39.0 30.0 39.0 13 36.11191828019161 38.0 35.0 39.0 31.0 39.0 14 36.96216648430267 39.0 36.0 40.0 31.0 41.0 15 37.03627595027501 39.0 36.0 40.0 31.0 41.0 16 36.97981660524842 38.0 36.0 40.0 31.0 41.0 17 37.11302984670446 39.0 36.0 40.0 31.0 41.0 18 37.136573099907416 39.0 36.0 40.0 31.0 41.0 19 37.260332994221685 39.0 36.0 40.0 31.0 41.0 20 37.22503458206929 39.0 36.0 40.0 31.0 41.0 21 37.11251843462159 39.0 36.0 40.0 31.0 41.0 22 37.068788584623604 39.0 36.0 40.0 31.0 41.0 23 36.94217018037568 39.0 35.0 40.0 31.0 41.0 24 36.87821576649601 39.0 35.0 40.0 31.0 41.0 25 36.7782772457303 38.0 35.0 40.0 30.0 41.0 26 36.47819728613094 38.0 35.0 40.0 30.0 41.0 27 36.30722463341177 38.0 35.0 40.0 30.0 41.0 28 36.12024908238583 38.0 35.0 40.0 30.0 41.0 29 35.9938003864409 38.0 34.0 40.0 30.0 41.0 30 35.81202998576463 38.0 34.0 40.0 29.0 41.0 31 35.5126709433769 38.0 34.0 40.0 27.0 41.0 32 35.19551906039237 37.0 34.0 40.0 27.0 41.0 33 35.28736327274457 38.0 34.0 40.0 27.0 41.0 34 35.23911259482623 38.0 34.0 40.0 27.0 41.0 35 35.11642995941639 38.0 34.0 40.0 26.0 41.0 36 34.999089247355116 38.0 33.0 40.0 25.0 41.0 37 34.83210634077793 38.0 33.0 40.0 25.0 41.0 38 34.6747748506018 38.0 33.0 40.0 24.0 41.0 39 34.57344252606463 38.0 33.0 40.0 24.0 41.0 40 34.35292602730703 38.0 33.0 40.0 23.0 41.0 41 34.18178641089354 38.0 33.0 40.0 21.0 41.0 42 33.94598518643212 38.0 33.0 40.0 19.0 41.0 43 33.5827655042944 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 0.0 14 5.0 15 13.0 16 29.0 17 100.0 18 211.0 19 530.0 20 1117.0 21 2067.0 22 3795.0 23 6485.0 24 10511.0 25 16263.0 26 23761.0 27 34395.0 28 47466.0 29 62652.0 30 79548.0 31 95335.0 32 114040.0 33 137436.0 34 163173.0 35 192895.0 36 235338.0 37 297091.0 38 345073.0 39 316774.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.27480119884507 24.86688647932578 14.684571273827778 21.173741048001375 2 17.42606939102623 23.87718059159125 36.22128681892536 22.475463198457163 3 20.43635618433524 26.051596813326356 32.92899148439415 20.583055517944253 4 13.300144915337972 16.16999923150957 34.955610529050766 35.57424532410169 5 10.666281201626273 41.49390879848352 34.44589095486765 13.393919045022562 6 31.302399153928633 35.73892184452341 15.38293695084955 17.575742050698413 7 23.1786319406579 36.64757028942813 21.471942780398372 18.701854989515596 8 27.590407409711524 33.88832370280645 20.58163747012951 17.939631417352516 9 24.81423573626872 13.86233225866656 25.112757673010982 36.21067433205374 10 16.35494011263874 28.534186845639546 33.74807419958062 21.362798842141085 11 30.417811778396636 22.02392932815639 25.72819042460926 21.830068468837712 12 19.53552987415054 28.1707091702865 32.34475578472021 19.94900517084274 13 30.739891606254783 21.523358449552262 30.113983598218564 17.62276634597439 14 20.2835729681662 23.34353717846909 29.81436381800683 26.558526035357875 15 22.523265132857357 29.348237778257573 28.282597717217477 19.84589937166759 16 20.88971979375181 28.81614964338385 28.560992523685975 21.733138039178375 17 18.13244017667961 27.652710026604403 29.24613833559611 24.968711461119874 18 19.24876401122728 26.855263976462236 34.3716035467663 19.524368465544185 19 18.467236691392543 25.204336115756615 36.0227143813835 20.30571281146734 20 23.333061922031156 23.964504890892655 34.60585589706619 18.09657729000999 21 22.587168771476563 25.009423156446353 32.98191668831858 19.421491383758504 22 20.54335017913146 24.711953319695677 34.04000907550602 20.704687425666847 23 19.532922495910533 27.142258556774973 35.16895810995268 18.15586083736181 24 18.22607707593051 25.981289087801862 33.38830174593706 22.404332090330563 25 19.40676198387634 27.107127565751675 34.66564262267486 18.820467827697126 26 20.996896762459606 25.910157979675258 33.030404774887195 20.062540482977937 27 19.611601277889797 27.400709206881285 32.57242107420324 20.415268441025678 28 19.107965586266708 27.090293965886342 32.773051968250364 21.028688479596582 29 18.199134167450403 26.684640803914178 33.947332789290904 21.168892239344515 30 17.53493886841614 26.667166795358316 36.3992746914145 19.398619644811042 31 19.111625064498302 26.13882962567197 34.88928248610313 19.860262823726593 32 20.267059572646133 26.66959119968675 32.61189769562656 20.45145153204056 33 21.4752820542847 26.528472570380917 31.853653806040334 20.142591569294048 34 19.388144388373103 29.517397159513 31.970482648583964 19.123975803529934 35 17.91964151751243 30.247188605848578 32.00442430918199 19.82874556745699 36 19.009159674013677 26.18370397748689 34.68471765295704 20.12241869554239 37 19.00824480445578 26.532315022524088 33.682523795757206 20.77691637726293 38 19.436952679286986 26.08110135656858 34.206515335043534 20.275430629100903 39 20.619147122003344 25.4152592923301 34.03054017558176 19.93505341008479 40 18.75089199781895 26.212796829428058 33.115807848117015 21.920503324635973 41 19.58150206943494 25.739809267994566 32.85872950234756 21.819959160222936 42 16.888080347504054 27.59306053142943 33.217175395132166 22.301683725934357 43 17.593444776643747 27.432683897929834 32.85049567632647 22.123375649099952 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 318.0 1 383.5 2 449.0 3 1147.0 4 1845.0 5 1845.0 6 3249.5 7 4654.0 8 5269.5 9 5885.0 10 8920.0 11 11955.0 12 11955.0 13 22005.0 14 32055.0 15 52337.5 16 72620.0 17 70475.5 18 68331.0 19 68331.0 20 73168.5 21 78006.0 22 62995.5 23 47985.0 24 51122.0 25 54259.0 26 54259.0 27 57839.5 28 61420.0 29 63026.5 30 64633.0 31 68063.0 32 71493.0 33 71493.0 34 76317.5 35 81142.0 36 86621.0 37 92100.0 38 94742.5 39 97385.0 40 97385.0 41 102449.5 42 107514.0 43 124671.0 44 141828.0 45 185583.5 46 229339.0 47 229339.0 48 229908.0 49 230477.0 50 205616.5 51 180756.0 52 164742.5 53 148729.0 54 148729.0 55 127070.5 56 105412.0 57 82950.5 58 60489.0 59 51367.5 60 42246.0 61 42246.0 62 36395.5 63 30545.0 64 26093.5 65 21642.0 66 18311.0 67 14980.0 68 14980.0 69 12510.5 70 10041.0 71 8331.5 72 6622.0 73 5312.0 74 4002.0 75 4002.0 76 3134.5 77 2267.0 78 1778.5 79 1290.0 80 1006.5 81 723.0 82 723.0 83 515.0 84 307.0 85 245.0 86 183.0 87 148.5 88 114.0 89 114.0 90 84.0 91 54.0 92 30.5 93 7.0 94 4.0 95 1.0 96 1.0 97 1.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2186104.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 38.980799415766874 #Duplication Level Percentage of deduplicated Percentage of total 1 72.18413784802924 28.137953984540943 2 13.921233870485327 10.853216502507369 3 5.522875984435204 6.458583628422741 4 2.7376168281742452 4.268579698251528 5 1.5034772368423563 2.9303372297761663 6 0.9159037044792275 2.142159515307756 7 0.5967580380889321 1.6283473767743866 8 0.41106502038438963 1.2818914485153612 9 0.30974443631055515 1.0866677167774377 >10 1.635327748498872 11.976515797404206 >50 0.15148101042498174 4.141188532226455 >100 0.0894456988364473 6.755944529300752 >500 0.00951480682286387 2.4246782378339113 >1k 0.00963374190814967 7.144638798440367 >5k 0.0011893508528579837 3.2547407470631193 >10k+ 5.946754264289919E-4 5.514556256857539 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34133 1.5613621309873638 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 32188 1.472391066481741 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 26891 1.2300878640723405 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 14455 0.6612219729710938 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11279 0.5159406871768224 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 9818 0.4491094659723417 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8246 0.37720071872152466 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8123 0.3715742709404493 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 8059 0.36864668835517433 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6781 0.31018652360546434 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6379 0.29179764549170584 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6348 0.2903795976769632 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 5920 0.2708013891379367 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5286 0.24180002415255636 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5243 0.2398330546030747 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4463 0.20415314184503575 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4370 0.199898998400808 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4345 0.19875541145343498 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4086 0.18690785067865023 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3833 0.17533475077123503 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3552 0.16248083348276202 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3522 0.16110852914591436 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3071 0.14047822061530468 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2984 0.13649853803844647 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2819 0.1289508641857844 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2763 0.12638922942366876 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2728 0.12478820769734653 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2710 0.12396482509523792 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2645 0.12099149903206802 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2599 0.1188872990489016 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2517 0.11513633386151803 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2483 0.11358105561309069 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2292 0.10484405133516063 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 2280 0.10429512960042157 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 2245 0.10269410787409931 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 2242 0.10255687744041456 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2212 0.1011845731035669 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACCTGTCTCT 2205 0.10086436875830244 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 4.574347789492174E-5 0.0 2 0.0 0.0 0.0 4.574347789492174E-5 0.0 3 0.0 0.0 0.0 4.574347789492174E-5 0.0 4 0.0 0.0 0.0 9.148695578984348E-5 0.0 5 0.0 0.0 0.0 9.148695578984348E-5 0.0 6 4.574347789492174E-5 0.0 0.0 9.148695578984348E-5 0.0 7 4.574347789492174E-5 0.0 0.0 9.148695578984348E-5 0.0 8 4.574347789492174E-5 0.0 0.0 9.148695578984348E-5 0.0 9 4.574347789492174E-5 4.574347789492174E-5 0.0 2.7446086736953045E-4 0.0 10 4.574347789492174E-5 4.574347789492174E-5 0.0 4.574347789492174E-4 0.0 11 4.574347789492174E-5 4.574347789492174E-5 0.0 0.0010063565136882782 0.0 12 4.574347789492174E-5 4.574347789492174E-5 0.0 0.001235073903162887 0.0 13 4.574347789492174E-5 4.574347789492174E-5 0.0 0.0014637912926374957 0.0 14 1.3723043368476522E-4 4.574347789492174E-5 0.0 0.0016925086821121046 0.0 15 1.3723043368476522E-4 4.574347789492174E-5 0.0 0.002424404328430852 0.0 16 1.3723043368476522E-4 4.574347789492174E-5 0.0 0.004254143444227722 0.0 17 1.3723043368476522E-4 4.574347789492174E-5 0.0 0.006587060816868731 0.0 18 1.3723043368476522E-4 9.148695578984348E-5 0.0 0.007776391242136696 0.0 19 1.3723043368476522E-4 1.3723043368476522E-4 0.0 0.00891997818950974 4.574347789492174E-5 20 1.3723043368476522E-4 1.3723043368476522E-4 0.0 0.01152735642952028 4.574347789492174E-5 21 1.3723043368476522E-4 1.3723043368476522E-4 0.0 0.015324065094798783 4.574347789492174E-5 22 1.3723043368476522E-4 1.3723043368476522E-4 0.0 0.024472760673783133 4.574347789492174E-5 23 1.3723043368476522E-4 1.8297391157968696E-4 0.0 0.0382872909980495 4.574347789492174E-5 24 1.3723043368476522E-4 1.8297391157968696E-4 0.0 0.05864313866128967 4.574347789492174E-5 25 1.3723043368476522E-4 1.8297391157968696E-4 0.0 0.06742588641711465 4.574347789492174E-5 26 1.3723043368476522E-4 1.8297391157968696E-4 0.0 0.0820637993434896 4.574347789492174E-5 27 1.3723043368476522E-4 1.8297391157968696E-4 0.0 0.19052158543234907 4.574347789492174E-5 28 1.3723043368476522E-4 1.8297391157968696E-4 0.0 0.292255080270655 4.574347789492174E-5 29 1.3723043368476522E-4 1.8297391157968696E-4 0.0 0.4008043533153043 4.574347789492174E-5 30 1.3723043368476522E-4 1.8297391157968696E-4 0.0 0.6290643080109638 4.574347789492174E-5 31 1.3723043368476522E-4 1.8297391157968696E-4 0.0 0.9533398228080641 4.574347789492174E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6920 0.0 31.519506 1 GTACGTT 40 0.001931742 23.125 6 ATTGGAC 575 0.0 20.269566 3 GTTATCA 230 0.0 20.108696 1 GTATTGG 595 0.0 19.899158 1 TGCGACG 85 1.2463606E-6 19.588234 22 TTGGACC 1225 0.0 19.179594 4 GTATCAA 11935 0.0 18.507751 2 GGACCCT 1250 0.0 18.5 6 TAGGACG 50 0.0070368615 18.5 4 TGTACCG 70 1.2198363E-4 18.5 5 TATTGGA 680 0.0 18.22794 2 ACCGTGT 115 6.412665E-8 17.695652 8 TGGACCC 1340 0.0 17.533583 5 GACCCTC 1285 0.0 17.132296 7 ACGTGCG 65 0.0015805509 17.076921 9 CGAATTA 110 7.8155244E-7 16.818182 15 GTATACT 155 4.0199666E-10 16.709677 4 GTACTAG 205 0.0 16.243904 1 TATACCG 105 9.35073E-6 15.857144 5 >>END_MODULE