##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088209_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2912381 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.141825880611087 31.0 31.0 33.0 30.0 34.0 2 31.290493929194017 31.0 31.0 34.0 30.0 34.0 3 31.331588483786977 31.0 31.0 34.0 28.0 34.0 4 35.29155010968689 37.0 35.0 37.0 33.0 37.0 5 35.180610641258816 37.0 35.0 37.0 32.0 37.0 6 35.2373199110968 37.0 35.0 37.0 32.0 37.0 7 35.063610496016835 37.0 35.0 37.0 32.0 37.0 8 35.13264370286717 37.0 35.0 37.0 32.0 37.0 9 36.60250427399437 39.0 35.0 39.0 32.0 39.0 10 36.491482055404155 38.0 35.0 39.0 32.0 39.0 11 36.51672806545572 38.0 35.0 39.0 32.0 39.0 12 36.36525543876299 38.0 35.0 39.0 32.0 39.0 13 36.39904978091809 38.0 35.0 39.0 32.0 39.0 14 37.308436636552706 39.0 36.0 41.0 32.0 41.0 15 37.35511871558014 39.0 36.0 41.0 32.0 41.0 16 37.339416099747936 39.0 36.0 41.0 32.0 41.0 17 37.46025640189247 39.0 36.0 41.0 32.0 41.0 18 37.478485129521175 39.0 36.0 41.0 32.0 41.0 19 37.583228636637855 39.0 36.0 41.0 32.0 41.0 20 37.55564570706923 39.0 36.0 41.0 32.0 41.0 21 37.426280764776315 39.0 36.0 41.0 32.0 41.0 22 37.38613766536727 39.0 36.0 41.0 32.0 41.0 23 37.253484691735046 39.0 36.0 41.0 31.0 41.0 24 37.16509515753605 39.0 36.0 41.0 31.0 41.0 25 37.09064164338388 39.0 36.0 40.0 31.0 41.0 26 36.82389151694095 39.0 35.0 40.0 31.0 41.0 27 36.65867892971421 38.0 35.0 40.0 30.0 41.0 28 36.49787888329171 38.0 35.0 40.0 30.0 41.0 29 36.34877476538956 38.0 35.0 40.0 30.0 41.0 30 36.148650880499495 38.0 35.0 40.0 30.0 41.0 31 35.853423023979346 38.0 35.0 40.0 29.0 41.0 32 35.57506143598657 38.0 34.0 40.0 28.0 41.0 33 35.67296758219477 38.0 34.0 40.0 29.0 41.0 34 35.63527127803677 38.0 34.0 40.0 29.0 41.0 35 35.52139194700144 38.0 34.0 40.0 27.0 41.0 36 35.4133246989319 38.0 34.0 40.0 27.0 41.0 37 35.248218210460784 38.0 34.0 40.0 26.0 41.0 38 35.10253637831039 38.0 34.0 40.0 25.0 41.0 39 35.00015279594256 38.0 34.0 40.0 25.0 41.0 40 34.788542776511726 38.0 33.0 40.0 24.0 41.0 41 34.61551459098243 38.0 33.0 40.0 23.0 41.0 42 34.338691263265346 38.0 33.0 40.0 22.0 41.0 43 34.01199740006545 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 10 1.0 11 0.0 12 3.0 13 2.0 14 9.0 15 9.0 16 25.0 17 89.0 18 196.0 19 452.0 20 1013.0 21 1904.0 22 3676.0 23 6382.0 24 10710.0 25 17157.0 26 26028.0 27 37953.0 28 53144.0 29 72808.0 30 92425.0 31 112483.0 32 137460.0 33 167370.0 34 204534.0 35 247142.0 36 310875.0 37 414891.0 38 494012.0 39 499628.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.978773038280366 22.862942726243578 14.34506680272945 21.813217432746608 2 17.25505694481594 22.970277583873813 37.20124530409998 22.573420167210266 3 19.868073579658706 26.274240904606916 33.02998474444106 20.827700771293316 4 12.39666101378906 15.165666854714408 35.18749778960925 37.25017434188727 5 10.615197668162235 41.1621968416907 34.5494974730298 13.673108017117267 6 31.32275619158345 35.54964134156898 15.362859461038921 17.76474300580865 7 23.964962001880934 36.26534440377135 20.791029745077996 18.978663849269722 8 28.51594623093613 32.71876172794699 20.115465661944643 18.64982637917223 9 25.056783435958412 13.375207433368095 24.711670622765357 36.856338507908134 10 16.35809325771594 27.783281102300833 33.39696969592921 22.461655944054023 11 30.555651887579273 21.305694550266605 26.233689891535484 21.904963670618645 12 20.677445705077734 27.37976246926484 31.946610007413177 19.996181818244246 13 31.836802945768426 20.591227590071494 29.62095275309103 17.951016711069055 14 20.990934908585107 22.45794763803225 29.122288601663037 27.428828851719604 15 22.62870139586819 28.738272911408224 28.159090448674124 20.473935244049457 16 21.462095790351608 28.397520791407445 27.66949104529936 22.470892372941588 17 18.698103029789028 26.70148582894889 28.21598547717486 26.384425664087217 18 20.222182468571248 25.988117626093565 33.94524960848186 19.84445029685333 19 18.957787459813808 23.939793591566488 35.577007266562994 21.52541168205671 20 24.78223144567967 22.62094142215596 33.83643829567629 18.760388836488083 21 23.947999935448006 23.854090519063266 32.35236049129561 19.845549054193114 22 21.54615072684515 23.45489824305268 33.401433397622085 21.59751763248009 23 20.381811308341867 26.067296826891813 34.873012837262706 18.677879027503614 24 18.697416306451665 24.868758586187727 32.73448769237267 23.69933741498794 25 20.25442412926056 26.051811215634217 34.31611454682612 19.377650108279102 26 22.116955164863388 24.705799138230883 32.478545904536524 20.698699792369197 27 20.224792017253236 26.6974684974253 31.992448790182326 21.08529069513913 28 19.92095127663585 25.93973796697616 32.08920810841713 22.050102647970853 29 18.855568691046948 25.95017616170412 33.235212013812756 21.959043133436182 30 17.96619329682483 26.186649342925943 36.06784277194502 19.77931458830421 31 19.900830282851043 25.480423062779217 34.29441408936537 20.324332565004372 32 21.45337440396706 25.686131038487066 31.512188824195736 21.348305733350134 33 22.605352802397764 25.63823208570582 30.88328759183637 20.87312752006005 34 20.10334499504014 29.581637842026847 30.981901063082063 19.333116099850947 35 18.360372492472653 30.884764047011704 31.149118195730573 19.605745264785067 36 19.81574526135145 25.96631416013221 34.05004358976384 20.167896988752503 37 19.902375410360115 26.62446980666335 32.61702366551629 20.85613111746025 38 20.317259314629506 26.00665915620243 33.36641050741644 20.30967102175162 39 21.626257004148837 25.372607498812826 33.077815024888565 19.923320472149765 40 19.27580903734779 26.55569446442619 31.918454350581193 22.25004214764483 41 20.85846597680729 25.847545358934838 31.694788559601232 21.59920010465664 42 17.633922210040513 28.11503714658213 32.29797200297626 21.953068640401103 43 18.459947376390655 27.92522681613429 31.689226100568575 21.92559970690648 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 195.0 1 296.5 2 398.0 3 1345.0 4 2292.0 5 2292.0 6 4094.0 7 5896.0 8 6524.5 9 7153.0 10 10923.0 11 14693.0 12 14693.0 13 26858.0 14 39023.0 15 65265.0 16 91507.0 17 89620.5 18 87734.0 19 87734.0 20 91642.5 21 95551.0 22 75598.0 23 55645.0 24 59590.5 25 63536.0 26 63536.0 27 67101.5 28 70667.0 29 71874.5 30 73082.0 31 76919.5 32 80757.0 33 80757.0 34 87486.5 35 94216.0 36 102483.0 37 110750.0 38 114918.0 39 119086.0 40 119086.0 41 126620.0 42 134154.0 43 158416.0 44 182678.0 45 249038.0 46 315398.0 47 315398.0 48 321909.5 49 328421.0 50 293706.0 51 258991.0 52 239769.5 53 220548.0 54 220548.0 55 187154.0 56 153760.0 57 121152.5 58 88545.0 59 75745.0 60 62945.0 61 62945.0 62 55121.5 63 47298.0 64 41396.5 65 35495.0 66 30417.5 67 25340.0 68 25340.0 69 21610.0 70 17880.0 71 14960.5 72 12041.0 73 9687.5 74 7334.0 75 7334.0 76 5831.5 77 4329.0 78 3275.5 79 2222.0 80 1774.0 81 1326.0 82 1326.0 83 990.0 84 654.0 85 523.0 86 392.0 87 321.5 88 251.0 89 251.0 90 202.0 91 153.0 92 91.0 93 29.0 94 20.5 95 12.0 96 12.0 97 7.0 98 2.0 99 2.0 100 2.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2912381.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.13829825274739 #Duplication Level Percentage of deduplicated Percentage of total 1 70.67415832099316 24.126954955239533 2 14.272050307039965 9.744470201198906 3 5.683638622738675 5.820892513916618 4 2.9117548816568197 3.9760942635557477 5 1.6628582088848674 2.838357474347046 6 1.0142131009899016 2.0774105600062245 7 0.6813470971907382 1.6282021292278754 8 0.48316428569514047 1.319552519210908 9 0.3481771656347369 1.0697558332711388 >10 1.9045258088534875 12.424496619655514 >50 0.20248581093756401 4.80737071143386 >100 0.137661136473218 8.700124234861772 >500 0.01188107877402403 2.7443853861695318 >1k 0.00985012513743868 7.267204609209915 >5k 0.0010154768182926474 2.412972207469583 >10k+ 0.0012185721819511768 9.041755781225726 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 45536 1.5635316945138704 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 45190 1.5516513807774464 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 41205 1.4148217558073617 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 26464 0.9086723200020876 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 15412 0.5291890037738881 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 15090 0.5181327580423029 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 13711 0.47078318393094853 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 13391 0.45979561053309986 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 12730 0.4370994042331686 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 11011 0.3780755333866002 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 10733 0.3685300789972191 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 10347 0.3552763185860641 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 9589 0.32924950409991005 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 8581 0.2946386478966866 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 8241 0.28296435116147234 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 8011 0.2750670327817686 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 7473 0.25659417500663545 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 6161 0.21154512407545578 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 5819 0.199802155006505 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5468 0.1877501604357397 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5257 0.1805052292265332 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 5005 0.17185251517572733 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4874 0.16735447731598302 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4848 0.16646173697740782 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4752 0.1631654649580532 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3793 0.1302370809313754 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3760 0.12910398742472226 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3758 0.12903531509098567 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3692 0.1267691280776794 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 3659 0.12563603457102626 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 3565 0.1224084348854082 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 3468 0.1190778266991853 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 3442 0.1181850863606101 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 3359 0.11533518451054309 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3322 0.11406474633641683 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 3300 0.11330935066531474 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 3296 0.11317200599784162 No Hit CTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTG 3198 0.10980706164475046 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 3191 0.10956670847667252 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 3120 0.10712884062902485 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 3101 0.10647645345852758 No Hit GATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGA 3041 0.10441628344643095 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 3036 0.10424460261208957 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCT 2962 0.10170372626383704 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACT 2927 0.10050196042344735 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 3.4336166868277196E-5 0.0 0.0 0.0 0.0 4 3.4336166868277196E-5 0.0 0.0 0.0 0.0 5 3.4336166868277196E-5 0.0 0.0 0.0 0.0 6 6.867233373655439E-5 0.0 0.0 0.0 0.0 7 6.867233373655439E-5 0.0 0.0 0.0 0.0 8 6.867233373655439E-5 0.0 0.0 3.4336166868277196E-5 0.0 9 6.867233373655439E-5 0.0 0.0 1.0300850060483158E-4 0.0 10 6.867233373655439E-5 0.0 0.0 1.0300850060483158E-4 0.0 11 6.867233373655439E-5 0.0 0.0 1.3734466747310879E-4 0.0 12 6.867233373655439E-5 0.0 0.0 4.1203400241932633E-4 0.0 13 6.867233373655439E-5 0.0 0.0 4.463701692876035E-4 0.0 14 6.867233373655439E-5 0.0 0.0 6.180510036289895E-4 0.0 15 6.867233373655439E-5 0.0 0.0 0.0011674296735214246 0.0 16 6.867233373655439E-5 0.0 0.0 0.0022318508464380174 0.0 17 6.867233373655439E-5 0.0 0.0 0.0032619358524863334 0.0 18 6.867233373655439E-5 0.0 0.0 0.003879986856115323 0.0 19 6.867233373655439E-5 0.0 0.0 0.0044293655260077575 0.0 20 6.867233373655439E-5 0.0 0.0 0.005493786698924351 0.0 21 6.867233373655439E-5 0.0 0.0 0.007450948210416151 0.0 22 6.867233373655439E-5 0.0 0.0 0.012395356239448067 0.0 23 6.867233373655439E-5 0.0 0.0 0.02115107879085875 0.0 24 6.867233373655439E-5 0.0 0.0 0.03330608186222888 0.0 25 6.867233373655439E-5 0.0 0.0 0.039349247231045666 0.0 26 6.867233373655439E-5 0.0 0.0 0.04625081677156938 0.0 27 6.867233373655439E-5 0.0 0.0 0.09813276490953622 0.0 28 6.867233373655439E-5 0.0 0.0 0.16148299278150763 0.0 29 6.867233373655439E-5 0.0 0.0 0.24231032958943216 0.0 30 6.867233373655439E-5 0.0 0.0 0.40969914307228344 0.0 31 6.867233373655439E-5 0.0 0.0 0.6375882825770391 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10205 0.0 30.600685 1 GTATTGG 1130 0.0 26.522123 1 ATTGGAC 1280 0.0 24.570312 3 ACGTTTA 140 0.0 23.785713 26 TATTGGA 1370 0.0 21.875912 2 TTGGACC 2185 0.0 21.336384 4 GGACCCT 2075 0.0 21.130121 6 TGGACCC 2215 0.0 20.295712 5 GCCGTCA 210 0.0 18.500002 13 GACCCTC 2335 0.0 18.222698 7 CGGGATA 210 0.0 17.61905 24 GTATCAA 18335 0.0 17.102535 2 TTTTTAC 2460 0.0 17.071138 1 AGCCGTC 245 0.0 16.612244 12 CGTCTGT 870 0.0 16.373564 34 ACCCTCG 2680 0.0 15.876865 8 GTTATCA 330 0.0 15.696969 1 GCCGGAA 190 2.7284841E-11 15.578948 15 ATCACGT 235 0.0 14.957446 23 CAATGCG 100 1.0942787E-4 14.8 19 >>END_MODULE