##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088208_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2623255 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.209596855814628 31.0 31.0 34.0 30.0 34.0 2 31.354739436310997 31.0 31.0 34.0 30.0 34.0 3 31.40549165064014 31.0 31.0 34.0 28.0 34.0 4 35.34816554242725 37.0 35.0 37.0 33.0 37.0 5 35.229902925945055 37.0 35.0 37.0 33.0 37.0 6 35.290593175272704 37.0 35.0 37.0 32.0 37.0 7 35.14182456528245 37.0 35.0 37.0 32.0 37.0 8 35.20519812218027 37.0 35.0 37.0 32.0 37.0 9 36.715844246937486 39.0 35.0 39.0 32.0 39.0 10 36.57776960303135 38.0 35.0 39.0 32.0 39.0 11 36.605947953973214 39.0 35.0 39.0 32.0 39.0 12 36.46454576470835 38.0 35.0 39.0 32.0 39.0 13 36.51198606311624 38.0 35.0 39.0 32.0 39.0 14 37.47549895073106 39.0 36.0 41.0 32.0 41.0 15 37.52659081942091 39.0 36.0 41.0 32.0 41.0 16 37.49607796420859 39.0 36.0 41.0 32.0 41.0 17 37.59040047574483 39.0 36.0 41.0 32.0 41.0 18 37.59957038107237 39.0 36.0 41.0 32.0 41.0 19 37.69396227206276 39.0 37.0 41.0 32.0 41.0 20 37.657953191740795 39.0 37.0 41.0 32.0 41.0 21 37.542601462686626 39.0 36.0 41.0 32.0 41.0 22 37.501889827714045 39.0 36.0 41.0 32.0 41.0 23 37.408113202872 39.0 36.0 41.0 32.0 41.0 24 37.31032209983398 39.0 36.0 41.0 31.0 41.0 25 37.234792271433776 39.0 36.0 41.0 31.0 41.0 26 36.99033567076018 39.0 36.0 40.0 31.0 41.0 27 36.82478943145062 39.0 35.0 40.0 31.0 41.0 28 36.683453571993574 38.0 35.0 40.0 30.0 41.0 29 36.5508454191453 38.0 35.0 40.0 30.0 41.0 30 36.37117550524063 38.0 35.0 40.0 30.0 41.0 31 36.12942432207315 38.0 35.0 40.0 30.0 41.0 32 35.87130378098965 38.0 35.0 40.0 29.0 41.0 33 35.995975991659215 38.0 35.0 40.0 30.0 41.0 34 35.9738588128108 38.0 35.0 40.0 30.0 41.0 35 35.86095023167782 38.0 35.0 40.0 29.0 41.0 36 35.77458767828519 38.0 35.0 40.0 29.0 41.0 37 35.63577578237724 38.0 35.0 40.0 27.0 41.0 38 35.50905992745654 38.0 34.0 40.0 27.0 41.0 39 35.438500641378745 38.0 34.0 40.0 26.0 41.0 40 35.265533087709734 38.0 34.0 40.0 25.0 41.0 41 35.12949332032151 38.0 34.0 40.0 25.0 41.0 42 34.91394965415105 38.0 34.0 40.0 24.0 41.0 43 34.5946310976249 38.0 33.0 40.0 23.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 3.0 13 1.0 14 2.0 15 12.0 16 25.0 17 61.0 18 169.0 19 334.0 20 777.0 21 1541.0 22 2816.0 23 5037.0 24 8302.0 25 13308.0 26 20485.0 27 30168.0 28 43023.0 29 58992.0 30 76001.0 31 94337.0 32 116032.0 33 144554.0 34 177909.0 35 218113.0 36 276697.0 37 369145.0 38 464678.0 39 500732.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 41.04873525448346 22.665581500845324 13.938332339021558 22.34735090564966 2 17.38565255760496 22.82725087724983 37.10443704481646 22.68265952032875 3 19.750615170846906 26.433228946480614 32.31984690775392 21.496308974918566 4 12.693733548587538 15.583159090519223 35.53497467840526 36.188132682487975 5 10.989324331793897 40.75505431229522 34.87461188485298 13.381009471057903 6 31.425309396150965 35.928645899845804 15.678041212158178 16.968003491845053 7 24.399114840150883 35.48804824540504 21.544340904715707 18.56849600972837 8 27.669174365435307 33.705110635451 20.309272259082707 18.316442740030993 9 25.266319896464505 13.642364162081078 23.981465774390976 37.10985016706344 10 16.27542880886532 27.595982853363477 33.777806579993175 22.350781757778027 11 31.192468898372443 21.653861328769032 25.60136166708917 21.552308105769356 12 20.15800980080091 27.235819621043323 32.2262608858079 20.379909692347866 13 31.042578780941998 20.879403641658932 29.168609227848606 18.909408349550464 14 20.743046329845935 22.510202020009494 28.779855561125395 27.966896089019176 15 22.76008241669224 28.817061246428576 27.575512102330883 20.8473442345483 16 21.568852437143928 28.587232274407175 27.435952661864743 22.407962626584148 17 19.022550228628173 27.06949953397592 28.262826145380455 25.645124092015454 18 20.271037318141012 26.559255581329307 32.847664447413614 20.32204265311607 19 19.511141692286873 24.77399261604381 34.164959182389815 21.549906509279502 20 24.249872772566906 23.649588011840255 32.917310745619474 19.183228469973372 21 23.49744878023677 24.7048037647884 31.535630352367573 20.262117102607256 22 21.6591982098576 24.19722825268607 32.59099858763254 21.55257494982379 23 20.547716482004226 26.341815797549227 33.740448412373176 19.370019308073367 24 19.31809907919741 25.394061957377378 32.00005336881089 23.287785594614324 25 20.45851432666668 26.444322035029 33.202033351694745 19.895130286609575 26 22.163990919678035 25.27443957983498 31.748228822588732 20.81334067789826 27 20.50868100889925 26.93722112413776 31.206992839049196 21.34710502791379 28 20.212293505587525 26.153423895122664 31.487445940253618 22.146836659036197 29 19.38770725682406 26.135850308109582 32.46794535796177 22.00849707710459 30 18.66330189020892 26.33514469618851 34.674745688085984 20.32680772551658 31 20.151872387549055 25.773018635245144 33.36160609624302 20.71350288096277 32 21.446066051527588 25.873542602606303 31.200054893634054 21.480336452232056 33 22.375217049047844 25.782777503521388 30.698311830149947 21.14369361728082 34 20.50403029823635 28.776195985521802 30.712873891405906 20.006899824835937 35 19.058879140609662 29.776556224995282 30.895395224635042 20.269169409760014 36 20.184008035818096 25.808394532746533 33.231386197681886 20.776211233753486 37 20.254912313137684 26.062849398933768 32.29034157944996 21.39189670847859 38 20.59620585875182 25.547344806356985 32.971746932722894 20.884702402168298 39 21.439471191325282 25.038968762091372 32.88852970832039 20.63303033826296 40 19.53511953660624 26.07504798427907 31.87238754905642 22.517444930058268 41 20.629218280342553 25.532287177571376 31.69051426567375 22.14798027641232 42 18.11360313808608 27.344768236408584 32.20430343218635 22.33732519331899 43 18.86892429443573 27.06660236995641 31.72661445418002 22.337858881427845 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 160.0 1 264.0 2 368.0 3 1112.5 4 1857.0 5 1857.0 6 3332.0 7 4807.0 8 5312.0 9 5817.0 10 8779.0 11 11741.0 12 11741.0 13 21501.5 14 31262.0 15 50381.5 16 69501.0 17 68642.0 18 67783.0 19 67783.0 20 71799.5 21 75816.0 22 60910.0 23 46004.0 24 50250.0 25 54496.0 26 54496.0 27 59436.5 28 64377.0 29 67842.0 30 71307.0 31 76417.0 32 81527.0 33 81527.0 34 88567.5 35 95608.0 36 103942.5 37 112277.0 38 116950.0 39 121623.0 40 121623.0 41 128738.5 42 135854.0 43 155759.5 44 175665.0 45 223871.5 46 272078.0 47 272078.0 48 273465.0 49 274852.0 50 248783.5 51 222715.0 52 206114.5 53 189514.0 54 189514.0 55 163215.0 56 136916.0 57 110735.0 58 84554.0 59 73834.0 60 63114.0 61 63114.0 62 55656.0 63 48198.0 64 41605.0 65 35012.0 66 29840.5 67 24669.0 68 24669.0 69 20711.0 70 16753.0 71 14068.0 72 11383.0 73 9034.5 74 6686.0 75 6686.0 76 5285.0 77 3884.0 78 3117.0 79 2350.0 80 1812.0 81 1274.0 82 1274.0 83 940.0 84 606.0 85 489.5 86 373.0 87 326.0 88 279.0 89 279.0 90 216.5 91 154.0 92 92.0 93 30.0 94 19.0 95 8.0 96 8.0 97 5.0 98 2.0 99 1.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2623255.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 41.17988548234563 #Duplication Level Percentage of deduplicated Percentage of total 1 73.78463066022435 30.384426409452065 2 13.755596000153503 11.329077360554656 3 5.150014889843364 6.362310701883736 4 2.4140003467509925 3.97633031334194 5 1.2709613572005052 2.616902157100169 6 0.7560974115788132 1.8681602893388085 7 0.49099137616340527 1.4153278050259819 8 0.3347346816399878 1.1027468685523296 9 0.2511944874186349 0.9309744203126308 >10 1.519679808737923 12.050603808472513 >50 0.16236033689429638 4.668570856178117 >100 0.09412192037732459 7.162725707488196 >500 0.007157664716026489 2.016370359350585 >1k 0.0068787946621552375 5.635884347549762 >5k 9.295668462371942E-4 2.7530967748429425 >10k+ 6.50696792366036E-4 5.726491820555605 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 34869 1.3292264762670805 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 32806 1.2505837213690625 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 30517 1.1633257155709225 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 19383 0.7388911867126909 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11839 0.45130953719710815 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 10111 0.3854371763324572 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10072 0.38395047374349806 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 9850 0.3754877051601922 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 9821 0.37438220836327385 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 8022 0.30580328637513315 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7650 0.29162243091121526 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 7177 0.2735913969476852 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 7146 0.27240965899235875 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6201 0.23638571164450273 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5544 0.21134049110742187 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5493 0.2093963415680138 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 5017 0.1912509458668715 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4268 0.16269863204301527 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4041 0.154045260563689 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3945 0.1503856849600973 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3693 0.14077929900066902 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3644 0.1389113906196691 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3573 0.13620482949617937 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3452 0.13159223941248563 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3452 0.13159223941248563 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2959 0.11279879386487399 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2872 0.109482303474119 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2816 0.10734755103869048 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2765 0.10540340149928237 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 2668 0.10170570531648658 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 2634 0.10040960562354784 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 3.812057920408043E-5 0.0 8 0.0 0.0 0.0 3.812057920408043E-5 0.0 9 0.0 0.0 0.0 7.624115840816086E-5 0.0 10 0.0 0.0 0.0 3.0496463363264344E-4 0.0 11 0.0 0.0 0.0 6.480498464693673E-4 0.0 12 0.0 0.0 0.0 0.0011054967969183324 0.0 13 0.0 0.0 0.0 0.001334220272142815 0.0 14 7.624115840816086E-5 0.0 0.0 0.0016391849057754585 0.0 15 7.624115840816086E-5 0.0 0.0 0.002210993593836665 0.0 16 7.624115840816086E-5 0.0 0.0 0.004345746029265169 0.0 17 7.624115840816086E-5 0.0 0.0 0.006404257306285512 0.0 18 7.624115840816086E-5 0.0 0.0 0.007776598157632407 0.0 19 7.624115840816086E-5 0.0 0.0 0.0089583361129589 0.0 20 7.624115840816086E-5 0.0 0.0 0.011359932602815967 0.0 21 7.624115840816086E-5 0.0 0.0 0.015705678632081135 0.0 22 7.624115840816086E-5 0.0 0.0 0.028094866873407273 0.0 23 7.624115840816086E-5 0.0 0.0 0.046202141995345475 0.0 24 7.624115840816086E-5 0.0 0.0 0.06957005704744677 0.0 25 7.624115840816086E-5 0.0 0.0 0.078680875477222 0.0 26 7.624115840816086E-5 0.0 0.0 0.08969772286720125 0.0 27 7.624115840816086E-5 0.0 0.0 0.17249562089846393 0.0 28 7.624115840816086E-5 0.0 0.0 0.25731390962754286 0.0 29 7.624115840816086E-5 0.0 0.0 0.3534158898010296 0.0 30 7.624115840816086E-5 0.0 0.0 0.550308681390105 0.0 31 7.624115840816086E-5 0.0 0.0 0.826149192510831 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7730 0.0 29.772316 1 GTATTGG 895 0.0 20.877096 1 ACGTTTA 150 0.0 19.733334 26 ATTGGAC 1070 0.0 18.845795 3 TACCCCG 100 2.8784234E-7 18.5 5 TCACGTT 170 0.0 18.5 24 GGACCCT 1605 0.0 18.211836 6 CCGTTTA 75 2.0685393E-4 17.266666 27 TTGGACC 1740 0.0 17.224138 4 TACGCAG 65 0.0015806645 17.076923 12 AGTCGTG 65 0.0015806645 17.076923 7 GTATCAA 13620 0.0 16.910793 2 GACCCTC 1670 0.0 16.727545 7 TATTGGA 1220 0.0 16.680328 2 AGATCGG 90 4.449456E-5 16.444445 17 TTAGTAC 135 2.222805E-8 16.444445 3 TGGACCC 1800 0.0 16.033333 5 CTAGACG 70 0.002593682 15.857143 4 GTACGGT 70 0.002593682 15.857143 6 TTTTTAC 1750 0.0 15.751429 1 >>END_MODULE