##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088206_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1459715 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.10392234100492 31.0 31.0 33.0 30.0 34.0 2 31.263615842818634 31.0 31.0 34.0 28.0 34.0 3 31.297177188697795 31.0 31.0 34.0 28.0 34.0 4 35.26220803376002 37.0 35.0 37.0 33.0 37.0 5 35.15681006223818 37.0 35.0 37.0 32.0 37.0 6 35.22470345238625 37.0 35.0 37.0 32.0 37.0 7 35.04104636864045 37.0 35.0 37.0 32.0 37.0 8 35.124261242776846 37.0 35.0 37.0 32.0 37.0 9 36.563478487238946 39.0 35.0 39.0 32.0 39.0 10 36.45337617274605 38.0 35.0 39.0 32.0 39.0 11 36.49586528877212 38.0 35.0 39.0 32.0 39.0 12 36.33551275420202 38.0 35.0 39.0 32.0 39.0 13 36.37020582784996 38.0 35.0 39.0 32.0 39.0 14 37.24170403126638 39.0 36.0 41.0 32.0 41.0 15 37.290873218402226 39.0 36.0 41.0 32.0 41.0 16 37.25692070027368 39.0 36.0 41.0 32.0 41.0 17 37.4139951976927 39.0 36.0 41.0 32.0 41.0 18 37.45397149443556 39.0 36.0 41.0 32.0 41.0 19 37.572175390401554 39.0 36.0 41.0 32.0 41.0 20 37.557596517128346 39.0 36.0 41.0 32.0 41.0 21 37.433720966078994 39.0 36.0 41.0 32.0 41.0 22 37.39597798200334 39.0 36.0 41.0 32.0 41.0 23 37.26790092586567 39.0 36.0 41.0 31.0 41.0 24 37.15850354349993 39.0 36.0 41.0 31.0 41.0 25 37.08868374991008 39.0 36.0 40.0 31.0 41.0 26 36.80893667599497 39.0 35.0 40.0 31.0 41.0 27 36.62666342402455 38.0 35.0 40.0 30.0 41.0 28 36.46881959834625 38.0 35.0 40.0 30.0 41.0 29 36.29258314122962 38.0 35.0 40.0 30.0 41.0 30 36.07443644821078 38.0 35.0 40.0 30.0 41.0 31 35.74419801125562 38.0 34.0 40.0 29.0 41.0 32 35.46895387113238 38.0 34.0 40.0 28.0 41.0 33 35.538113261835356 38.0 34.0 40.0 29.0 41.0 34 35.48159949031147 38.0 34.0 40.0 28.0 41.0 35 35.34499953758097 38.0 34.0 40.0 27.0 41.0 36 35.228063012300346 38.0 34.0 40.0 26.0 41.0 37 35.05038312273286 38.0 34.0 40.0 25.0 41.0 38 34.891504848549204 38.0 34.0 40.0 25.0 41.0 39 34.75177414769321 38.0 33.0 40.0 24.0 41.0 40 34.4945020089538 38.0 33.0 40.0 23.0 41.0 41 34.29331410583573 38.0 33.0 40.0 21.0 41.0 42 33.97010649339083 38.0 33.0 40.0 20.0 41.0 43 33.625883134721505 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 1.0 14 0.0 15 6.0 16 14.0 17 41.0 18 105.0 19 229.0 20 521.0 21 1026.0 22 1875.0 23 3334.0 24 5514.0 25 9051.0 26 13702.0 27 19616.0 28 27661.0 29 37374.0 30 47217.0 31 58005.0 32 70787.0 33 85964.0 34 104585.0 35 125820.0 36 158641.0 37 211536.0 38 244294.0 39 232796.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.28642577489441 23.622145418797505 15.039853670065732 21.05157513624235 2 17.236035801509196 23.28296962078214 37.126836402996474 22.35415817471219 3 20.206752688024718 25.68391775106785 33.79878948972916 20.31054007117828 4 12.54888796785674 15.29634209417592 34.44631315016973 37.708456787797616 5 10.354212979931015 41.57421140428097 34.35581603258171 13.71575958320631 6 31.33282866860997 35.04088126791874 14.952370839513193 18.6739192239581 7 23.348324844233293 37.267822828428834 20.222303668866868 19.161548658471002 8 28.71293368911055 32.68364029964753 19.96081426853872 18.6426117427032 9 24.874855708134806 13.526818591300357 25.516282287980875 36.082043412583964 10 16.756147604155604 28.391980626355146 32.972669322436225 21.87920244705302 11 30.09066838389686 21.276961598668233 26.332880048502616 22.299489968932292 12 20.731923697434087 28.100142836101565 31.467581000400763 19.70035246606358 13 32.067903666126604 20.71808537968028 30.27803372576154 16.93597722843158 14 20.755969487194417 23.090671809223036 29.493976563918302 26.65938213966425 15 22.80088921467547 29.068277026679866 28.386637117519513 19.74419664112515 16 21.38102300791593 28.447881949558646 28.102883097042913 22.068211945482506 17 18.259043717437994 27.165508335531253 28.331146833457215 26.244301113573542 18 19.61841866391727 26.218542660724868 34.7881607026029 19.374877972754955 19 18.277197946174425 24.14779597387161 36.69181997855746 20.883186101396507 20 24.543695173372885 22.66976772863196 34.86420294372532 17.92233415426984 21 23.722987021439117 23.978653367266897 33.13290608098156 19.165453530312423 22 20.89818903005039 23.743675991546294 34.25689261259903 21.101242365804286 23 20.04829709909126 26.602864257748944 35.621542561390406 17.727296081769385 24 17.894314986144554 25.22739027823925 33.33260259708231 23.54569213853389 25 19.48784523006203 26.517368116378883 35.30894729450612 18.685839359052967 26 21.565168543174522 25.072428522006007 33.15558174027122 20.20682119454825 27 19.58142514120907 27.189965164432785 32.5425168611681 20.686092833190038 28 19.385770509996814 26.506818111754693 32.56656265092843 21.540848727320057 29 18.114357939734813 26.405839496066015 33.89264342697033 21.58715913722884 30 17.201782539742347 26.43721548384445 37.23007573396176 19.130926242451437 31 19.231151286381245 25.815929821917294 35.19180113926348 19.761117752437976 32 21.01053972864566 26.12167443644821 32.229921594283816 20.637864240622314 33 22.278115933589778 26.207239084341804 31.22575297232679 20.288892009741627 34 19.61711703997013 30.41552631849368 31.2767903323594 18.69056630917679 35 17.542945026940192 31.8194990117934 31.480186200730962 19.15736976053545 36 19.183950291666523 26.34452615750335 34.898182179398034 19.573341371432097 37 19.09064440661362 27.040894969223444 33.44789907618953 20.420561547973406 38 19.715218381670393 26.369531038593152 34.27833515446508 19.63691542527137 39 21.423291532936222 25.45339329937693 33.736928098978225 19.38638706870862 40 18.677892602323055 26.991570272279176 32.40988823160686 21.92064889379091 41 20.226825099420093 26.10591793603546 32.345355086438104 21.321901878106342 42 16.61735338747632 28.62277910414019 33.0114440147563 21.748423493627183 43 17.53184697012773 28.489739435437738 32.367551200063026 21.610862394371505 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 151.0 1 181.0 2 211.0 3 674.5 4 1138.0 5 1138.0 6 2155.5 7 3173.0 8 3450.5 9 3728.0 10 5902.0 11 8076.0 12 8076.0 13 14968.0 14 21860.0 15 37000.0 16 52140.0 17 50362.0 18 48584.0 19 48584.0 20 51726.5 21 54869.0 22 42573.5 23 30278.0 24 31499.5 25 32721.0 26 32721.0 27 34412.5 28 36104.0 29 35689.5 30 35275.0 31 37217.5 32 39160.0 33 39160.0 34 41813.0 35 44466.0 36 48683.0 37 52900.0 38 54801.5 39 56703.0 40 56703.0 41 60435.0 42 64167.0 43 78065.0 44 91963.0 45 128835.5 46 165708.0 47 165708.0 48 170128.5 49 174549.0 50 155529.5 51 136510.0 52 124491.0 53 112472.0 54 112472.0 55 94511.0 56 76550.0 57 57364.0 58 38178.0 59 31270.0 60 24362.0 61 24362.0 62 21077.0 63 17792.0 64 15212.5 65 12633.0 66 10644.0 67 8655.0 68 8655.0 69 7257.5 70 5860.0 71 4791.0 72 3722.0 73 2980.0 74 2238.0 75 2238.0 76 1747.0 77 1256.0 78 1007.5 79 759.0 80 592.0 81 425.0 82 425.0 83 304.0 84 183.0 85 140.0 86 97.0 87 78.0 88 59.0 89 59.0 90 45.0 91 31.0 92 19.5 93 8.0 94 4.5 95 1.0 96 1.0 97 0.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1459715.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.556116951791054 #Duplication Level Percentage of deduplicated Percentage of total 1 72.91418610921751 25.196311426347783 2 13.337472191354538 9.217824977714168 3 5.2144047218298795 5.405687382045744 4 2.552309320051834 3.5279159744342996 5 1.4699375702144732 2.5397667294081456 6 0.8865509342538769 1.8381454660677958 7 0.6044160549183875 1.4620390316909972 8 0.4271838549376805 1.1809452200914745 9 0.3182858830801759 0.9898851779840387 >10 1.9164176757474858 12.559296393396263 >50 0.20226152446749515 4.851495907336585 >100 0.1287432045625278 8.770906416949035 >500 0.011212471225863777 2.776977351338137 >1k 0.01401558903232972 9.208458557577833 >5k 0.0018020043041566784 4.345219544018778 >10k+ 8.008908018474126E-4 6.129124443598984 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 26802 1.836111843750321 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 25964 1.7787033770290777 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 22234 1.5231740442483634 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 13585 0.930661122205362 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 8757 0.5999116265846415 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8532 0.5844976587895582 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8260 0.5658638843883909 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 7237 0.4957817108134122 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7188 0.4924248911602608 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6056 0.41487550652010835 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 5861 0.40151673443103625 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5624 0.38528068835354845 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 5287 0.36219398992269036 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 4880 0.334311834844473 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4818 0.33006443038538347 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4657 0.3190348800964572 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4274 0.29279688158304873 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3909 0.267792000493247 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3214 0.22017996663732303 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3179 0.21778223831364343 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3125 0.21408288604282344 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3044 0.20853385763659346 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2765 0.18942053757069016 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2755 0.18873547233535312 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2653 0.18174780693491538 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2457 0.16832052832230948 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 2314 0.1585240954569899 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2201 0.1507828582976814 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2102 0.14400071246784477 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2093 0.1433841537560414 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 2075 0.14215103633243475 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2061 0.1411919450029629 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2054 0.140712399338227 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 1993 0.13653350140267106 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1981 0.13571142312026663 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 1979 0.13557441007319923 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1939 0.1328341491318511 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1927 0.13201207084944663 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 1892 0.12961434252576703 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 1880 0.12879226424336257 No Hit CTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTG 1875 0.12844973162569406 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAA 1873 0.12831271857862667 No Hit CGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAG 1858 0.1272851207256211 No Hit GATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGA 1818 0.12454485978427296 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 1809 0.12392830107246962 No Hit CTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTAAA 1757 0.12036596184871705 No Hit GCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAAAA 1699 0.11639258348376223 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 1696 0.11618706391316114 No Hit TCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTG 1657 0.1135153094953467 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 1645 0.11269323121294225 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCT 1618 0.11084355507753225 No Hit ACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTAA 1611 0.11036400941279634 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1596 0.10933641155979079 No Hit GTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAAAA 1563 0.10707569628317856 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACT 1536 0.10522602014776856 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAAAAAAAAAAAAAA 1534 0.10508900710070115 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTC 1488 0.1019377070181508 No Hit TTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAAC 1480 0.10138965482988117 No Hit TCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATC 1476 0.10111562873574637 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 6.85065235337035E-5 0.0 0.0 0.0 0.0 3 6.85065235337035E-5 0.0 0.0 0.0 0.0 4 6.85065235337035E-5 0.0 0.0 0.0 0.0 5 6.85065235337035E-5 0.0 0.0 0.0 0.0 6 6.85065235337035E-5 0.0 0.0 0.0 0.0 7 6.85065235337035E-5 0.0 0.0 0.0 0.0 8 6.85065235337035E-5 0.0 0.0 0.0 0.0 9 6.85065235337035E-5 0.0 0.0 0.0 0.0 10 6.85065235337035E-5 0.0 0.0 1.37013047067407E-4 0.0 11 6.85065235337035E-5 0.0 0.0 2.0551957060111048E-4 0.0 12 6.85065235337035E-5 0.0 0.0 2.0551957060111048E-4 0.0 13 6.85065235337035E-5 0.0 0.0 4.7954566473592446E-4 0.0 14 1.37013047067407E-4 0.0 0.0 6.165587118033315E-4 0.0 15 1.37013047067407E-4 0.0 0.0 0.0011646109000729595 0.0 16 1.37013047067407E-4 0.0 0.0 0.0020551957060111047 0.0 17 1.37013047067407E-4 0.0 0.0 0.0033568196531514713 0.0 18 1.37013047067407E-4 0.0 0.0 0.0041103914120222095 0.0 19 1.37013047067407E-4 0.0 0.0 0.004452924029690727 0.0 20 1.37013047067407E-4 0.0 0.0 0.005823054500364798 0.0 21 1.37013047067407E-4 0.0 0.0 0.0076042241122410885 0.0 22 1.37013047067407E-4 0.0 0.0 0.013016239471403665 0.0 23 1.37013047067407E-4 0.0 0.0 0.019798385301240312 0.0 24 1.37013047067407E-4 0.0 0.0 0.030279883401896947 0.0 25 1.37013047067407E-4 0.0 0.0 0.03713053575526729 0.0 26 1.37013047067407E-4 0.0 0.0 0.04528281205577801 0.0 27 1.37013047067407E-4 0.0 0.0 0.12276369017239666 0.0 28 1.37013047067407E-4 0.0 0.0 0.1997650226242794 0.0 29 1.37013047067407E-4 0.0 0.0 0.29855142955987984 0.0 30 1.37013047067407E-4 0.0 0.0 0.49680930866641776 0.0 31 1.37013047067407E-4 0.0 0.0 0.7714519615130351 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5570 0.0 31.420109 1 GTATTGG 355 0.0 26.056337 1 GTCCTAC 85 1.9772415E-9 23.941175 30 TGCGACG 85 1.9772415E-9 23.941175 22 CAATGCG 85 1.9772415E-9 23.941175 19 TCACGTT 70 1.9236722E-7 23.785713 24 ATTGGAC 385 0.0 23.545454 3 ATCGTCA 95 2.8194336E-10 23.368422 10 TATTGGA 415 0.0 22.734938 2 CGTCTGT 565 0.0 22.265488 34 CGCGTCA 50 2.7025875E-4 22.199999 32 CGACGAG 95 7.1486284E-9 21.421053 24 CACGGCT 105 9.840733E-10 21.142857 4 ATCGCAG 70 5.103482E-6 21.142857 11 GTAGACC 80 6.962764E-7 20.8125 3 CGTGTCT 170 0.0 20.67647 35 ACCGTAC 45 0.0038262955 20.555555 8 TCCACGG 135 1.8189894E-12 20.555553 2 CTAGTAC 100 1.290573E-8 20.349998 3 ATTCGCG 65 6.903762E-5 19.923077 29 >>END_MODULE