##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088205_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1645602 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.084784170169943 31.0 31.0 33.0 28.0 34.0 2 31.248871233749107 31.0 31.0 34.0 28.0 34.0 3 31.301622141927393 31.0 31.0 34.0 28.0 34.0 4 35.25543600457462 37.0 35.0 37.0 33.0 37.0 5 35.108134287634556 37.0 35.0 37.0 32.0 37.0 6 35.15591133214471 37.0 35.0 37.0 32.0 37.0 7 34.989358909383924 37.0 35.0 37.0 32.0 37.0 8 35.03952717607295 37.0 35.0 37.0 32.0 37.0 9 36.538975402314776 38.0 35.0 39.0 32.0 39.0 10 36.389332900664925 38.0 35.0 39.0 32.0 39.0 11 36.42121606561003 38.0 35.0 39.0 32.0 39.0 12 36.251058275330244 38.0 35.0 39.0 32.0 39.0 13 36.306574736783254 38.0 35.0 39.0 32.0 39.0 14 37.224821676201174 39.0 36.0 41.0 32.0 41.0 15 37.29813101831427 39.0 36.0 41.0 32.0 41.0 16 37.27137181408384 39.0 36.0 41.0 32.0 41.0 17 37.35915670982413 39.0 36.0 41.0 32.0 41.0 18 37.38007367516568 39.0 36.0 41.0 32.0 41.0 19 37.47719740253111 39.0 36.0 41.0 32.0 41.0 20 37.43861152332095 39.0 36.0 41.0 32.0 41.0 21 37.31244675200929 39.0 36.0 41.0 31.0 41.0 22 37.27053017679852 39.0 36.0 41.0 31.0 41.0 23 37.15816582624474 39.0 36.0 40.0 31.0 41.0 24 37.06779889669556 39.0 36.0 40.0 31.0 41.0 25 36.98464695594682 39.0 36.0 40.0 31.0 41.0 26 36.715622003376275 39.0 35.0 40.0 30.0 41.0 27 36.562221606439465 38.0 35.0 40.0 30.0 41.0 28 36.42218956953139 38.0 35.0 40.0 30.0 41.0 29 36.272705672453 38.0 35.0 40.0 30.0 41.0 30 36.0970113065006 38.0 35.0 40.0 30.0 41.0 31 35.83629516736124 38.0 34.0 40.0 29.0 41.0 32 35.52493798622024 38.0 34.0 40.0 27.0 41.0 33 35.68358266458111 38.0 34.0 40.0 29.0 41.0 34 35.66302179992489 38.0 34.0 40.0 28.0 41.0 35 35.57831723588085 38.0 34.0 40.0 27.0 41.0 36 35.4879302528801 38.0 34.0 40.0 27.0 41.0 37 35.35881276274579 38.0 34.0 40.0 27.0 41.0 38 35.238177274942544 38.0 34.0 40.0 26.0 41.0 39 35.173556546479645 38.0 34.0 40.0 25.0 41.0 40 35.01579786606968 38.0 34.0 40.0 25.0 41.0 41 34.87108000597957 38.0 33.0 40.0 24.0 41.0 42 34.65184108915764 38.0 33.0 40.0 23.0 41.0 43 34.329260659624865 38.0 33.0 40.0 22.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 3.0 15 7.0 16 14.0 17 49.0 18 116.0 19 299.0 20 592.0 21 1200.0 22 2244.0 23 3681.0 24 6283.0 25 9794.0 26 14666.0 27 21620.0 28 30342.0 29 40888.0 30 52471.0 31 63979.0 32 78922.0 33 95649.0 34 117230.0 35 140368.0 36 175115.0 37 227687.0 38 280403.0 39 281980.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.09851713840892 23.025008477140886 14.268699235902726 22.607775148547464 2 17.308984797052993 23.62041368447535 36.15005329356673 22.92054822490493 3 19.70385305802983 25.714844780208097 32.69861120732717 21.88269095443491 4 13.338097547280569 16.313361310936667 35.60216868963455 34.74637245214821 5 11.45392385279065 40.36759799757171 34.79887603442388 13.379602115213766 6 31.527185795836417 36.41785802399365 15.558500779653889 16.49645540051604 7 24.313290820016018 35.44708866420921 21.730588562726588 18.509031953048186 8 27.105278189987615 33.9053428471769 20.594651683699947 18.39472727913554 9 25.103214507517613 14.006120556489357 24.207615207079233 36.683049728913794 10 16.146249214573146 28.420055396140743 34.35770010002418 21.075995289261922 11 31.394772247481466 22.35789698845772 25.014797016532555 21.232533747528258 12 20.012736980144652 27.96271516442007 31.73385788301181 20.290689972423465 13 30.431173515831894 21.566879476325383 28.75233501174646 19.24961199609626 14 20.711812455259533 23.064203859742513 29.027857282623625 27.196126402374325 15 22.77895870325875 29.841723575931482 26.743951453632164 20.635366267177606 16 21.596959653670815 28.596586537935657 27.64495910918922 22.161494699204304 17 19.121512978229244 28.014246458135077 28.60837553673367 24.25586502690201 18 19.975425406629306 27.15814638047353 32.63760010014572 20.228828112751444 19 19.558556686246128 25.906264090588127 33.9935172660218 20.54166195714395 20 23.182033079687557 25.088751715177786 32.67788930737809 19.051325897756566 21 22.735144949993984 25.740610427065597 31.422543239495333 20.101701383445086 22 21.134028762726345 25.784728020505565 32.12581170902806 20.955431507740023 23 20.579338138869545 27.29536060359674 32.81972190116444 19.30557935636928 24 19.367076607831056 26.70135306106823 31.583760836459852 22.347809494640867 25 20.396061745185044 27.404439226495835 32.524632323003985 19.674866705315136 26 21.359964317009826 26.522087357696456 31.472494564299264 20.645453760994457 27 20.198747935406008 27.7597499273822 31.074342398708797 20.967159738502993 28 20.258908290096876 27.41312905550674 31.18020031575071 21.147762338645677 29 19.27464842653327 27.366641508700155 31.96666022525495 21.39204983951162 30 18.8420407850744 27.534786661659382 33.73835228688346 19.884820266382757 31 20.27665255632893 26.895810773200324 32.52997991008761 20.29755676038313 32 20.82083031012359 27.243950845951815 31.057388116932284 20.87783072699231 33 21.586993695924043 27.13456838287751 30.623504346737544 20.654933574460895 34 20.256599104765307 29.294628956454844 30.56990693983114 19.878864998948714 35 19.05673425287524 30.032535205961103 30.80933299789378 20.10139754326988 36 19.980955297818063 27.057149906234923 32.44417544460933 20.51771935133769 37 19.853220888161292 27.10673662282861 31.89574392836178 21.144298560648323 38 20.1061374500031 26.896236149445613 32.446849238151145 20.550777162400145 39 20.9988198847595 26.30599622508966 32.299425985141 20.395757905009837 40 19.40280821243533 26.898970711022468 31.95882114873463 21.739399927807572 41 20.027442844624645 26.38140935657589 31.69958471124853 21.89156308755094 42 17.930398723385117 27.72492984330355 32.142279846524254 22.202391586787083 43 18.41295768964792 27.43129869798408 31.860559236072877 22.29518437629512 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 219.0 1 293.0 2 367.0 3 880.0 4 1393.0 5 1393.0 6 2376.0 7 3359.0 8 3585.0 9 3811.0 10 5682.0 11 7553.0 12 7553.0 13 13529.0 14 19505.0 15 31182.0 16 42859.0 17 42251.0 18 41643.0 19 41643.0 20 45249.5 21 48856.0 22 40815.5 23 32775.0 24 35894.0 25 39013.0 26 39013.0 27 43244.5 28 47476.0 29 49409.0 30 51342.0 31 55262.0 32 59182.0 33 59182.0 34 63971.0 35 68760.0 36 73604.0 37 78448.0 38 80581.0 39 82714.0 40 82714.0 41 86071.0 42 89428.0 43 97908.0 44 106388.0 45 129351.0 46 152314.0 47 152314.0 48 154048.5 49 155783.0 50 142100.5 51 128418.0 52 118799.5 53 109181.0 54 109181.0 55 96380.5 56 83580.0 57 69140.5 58 54701.0 59 47766.0 60 40831.0 61 40831.0 62 35651.0 63 30471.0 64 26261.0 65 22051.0 66 18815.5 67 15580.0 68 15580.0 69 13097.0 70 10614.0 71 8981.0 72 7348.0 73 5739.5 74 4131.0 75 4131.0 76 3286.5 77 2442.0 78 1933.5 79 1425.0 80 1143.5 81 862.0 82 862.0 83 623.0 84 384.0 85 297.5 86 211.0 87 160.5 88 110.0 89 110.0 90 82.0 91 54.0 92 35.5 93 17.0 94 10.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1645602.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 42.41810783716578 #Duplication Level Percentage of deduplicated Percentage of total 1 70.67343813035585 29.978335198366977 2 14.483575831641712 12.287317629886923 3 5.907113560830533 7.517057400890816 4 2.9966437790738643 5.084478358813086 5 1.6889055024926138 3.5820087865757175 6 1.0299127189199075 2.6212169264407947 7 0.6392521379155487 1.8981106284868356 8 0.477030118048807 1.6187771991176172 9 0.3313796403232685 1.265084758644625 >10 1.553326079117342 11.766558002716888 >50 0.129229728070118 3.772026161542294 >100 0.07374175220532116 5.961081218400604 >500 0.008658432108055872 2.4950780036553977 >1k 0.006926745686444699 5.475509003826672 >5k 4.3292160540279366E-4 1.1976815146714141 >10k+ 4.3292160540279366E-4 3.4796792079633656 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 20297 1.2334088072328546 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 20019 1.216515293491379 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 16530 1.0044956192323538 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7620 0.4630524270145515 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 6805 0.41352647845590856 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5141 0.31240846814721906 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4829 0.2934488412143398 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4321 0.2625786794133697 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3988 0.24234292374462355 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3700 0.224841729652735 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3478 0.21135122587357089 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3287 0.19974453118068647 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3254 0.19773918602432422 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2842 0.172702755587317 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2768 0.1682059209942623 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2620 0.1592122518081529 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2539 0.15429004096980922 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2518 0.15301391223394237 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2493 0.15149471135791037 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2133 0.12961821874304966 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1926 0.11703923548950475 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1872 0.11375776159727564 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1800 0.10938246307430351 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 6.0768035041279724E-5 0.0 10 0.0 0.0 0.0 6.0768035041279724E-5 0.0 11 0.0 0.0 0.0 1.2153607008255945E-4 0.0 12 0.0 0.0 0.0 1.8230410512383918E-4 0.0 13 0.0 0.0 0.0 2.430721401651189E-4 0.0 14 0.0 0.0 0.0 5.469123153715175E-4 0.0 15 0.0 0.0 0.0 8.507524905779162E-4 0.0 16 0.0 0.0 0.0 0.0013976648059494338 0.0 17 0.0 6.0768035041279724E-5 0.0 0.0024914894366924686 0.0 18 0.0 6.0768035041279724E-5 0.0 0.0026130255067750283 0.0 19 0.0 6.0768035041279724E-5 0.0 0.003038401752063986 0.0 20 0.0 6.0768035041279724E-5 0.0 0.0033422419272703847 0.0 21 0.0 6.0768035041279724E-5 0.0 0.004253762452889581 0.0 22 0.0 6.0768035041279724E-5 0.0 0.0066237158194994905 0.0 23 0.0 6.0768035041279724E-5 0.0 0.010695174167265231 0.0 24 0.0 6.0768035041279724E-5 0.0 0.01823041051238392 0.0 25 0.0 6.0768035041279724E-5 0.0 0.023334925455851415 0.0 26 0.0 6.0768035041279724E-5 0.0 0.032753970887249774 0.0 27 0.0 6.0768035041279724E-5 0.0 0.1109016639503355 0.0 28 0.0 6.0768035041279724E-5 0.0 0.19287774322102186 0.0 29 0.0 6.0768035041279724E-5 0.0 0.28220675473170304 0.0 30 0.0 6.0768035041279724E-5 0.0 0.4435458877663007 0.0 31 0.0 6.0768035041279724E-5 0.0 0.7029038613224826 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position CGCGATA 40 1.6006234E-6 32.375 14 GGTATCA 4255 0.0 31.826086 1 ATTGGAC 320 0.0 19.65625 3 TGCGCGA 70 1.2196037E-4 18.5 12 GTATAGA 90 2.1533651E-6 18.5 1 GTATCAA 7410 0.0 18.375168 2 GTATTGG 305 0.0 18.196722 1 CGTCTGT 570 0.0 17.526316 34 TTAGTAC 95 3.6083002E-6 17.526316 3 ACGTGCG 75 2.0679497E-4 17.266666 9 ACCGTCG 75 2.0679497E-4 17.266666 23 CGATCTG 120 1.0419717E-7 16.958334 33 ATAACAC 100 5.8808946E-6 16.65 3 GACCGTC 90 4.447833E-5 16.444445 22 GGCGTCG 90 4.447833E-5 16.444445 8 ATCGGGA 125 1.658882E-7 16.279999 22 GCGATAT 80 3.383676E-4 16.1875 15 ACGGCTC 150 4.6748028E-9 16.033333 5 CTTAACG 70 0.0025931322 15.857142 30 AGCCGTC 105 9.347921E-6 15.857142 12 >>END_MODULE