##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088204_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2419700 Sequences flagged as poor quality 0 Sequence length 43 %GC 41 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.076418151010454 31.0 31.0 33.0 30.0 34.0 2 31.218673802537506 31.0 31.0 34.0 28.0 34.0 3 31.246674794396 31.0 31.0 34.0 28.0 34.0 4 35.21497127743109 37.0 35.0 37.0 33.0 37.0 5 35.0988581229078 35.0 35.0 37.0 32.0 37.0 6 35.15724593957928 37.0 35.0 37.0 32.0 37.0 7 34.97911724593958 37.0 35.0 37.0 32.0 37.0 8 35.049150721163784 37.0 35.0 37.0 32.0 37.0 9 36.49728354754722 38.0 35.0 39.0 32.0 39.0 10 36.37782245732942 38.0 35.0 39.0 32.0 39.0 11 36.42051907261231 38.0 35.0 39.0 32.0 39.0 12 36.26018184072406 38.0 35.0 39.0 32.0 39.0 13 36.309778898210524 38.0 35.0 39.0 32.0 39.0 14 37.189537545976776 39.0 36.0 41.0 31.0 41.0 15 37.25120138860189 39.0 36.0 41.0 32.0 41.0 16 37.218951109641694 39.0 36.0 41.0 32.0 41.0 17 37.35663346695871 39.0 36.0 41.0 32.0 41.0 18 37.397597636070586 39.0 36.0 41.0 32.0 41.0 19 37.50581931644419 39.0 36.0 41.0 32.0 41.0 20 37.474246394181094 39.0 36.0 41.0 32.0 41.0 21 37.35065999917345 39.0 36.0 41.0 31.0 41.0 22 37.31491465884201 39.0 36.0 41.0 31.0 41.0 23 37.19494152167624 39.0 36.0 41.0 31.0 41.0 24 37.09456420217382 39.0 36.0 41.0 31.0 41.0 25 37.017686903335125 39.0 35.0 40.0 31.0 41.0 26 36.726152828863086 39.0 35.0 40.0 30.0 41.0 27 36.55420010745134 38.0 35.0 40.0 30.0 41.0 28 36.38490267388519 38.0 35.0 40.0 30.0 41.0 29 36.22623217754267 38.0 35.0 40.0 30.0 41.0 30 36.038694466256146 38.0 35.0 40.0 30.0 41.0 31 35.72198206389222 38.0 34.0 40.0 29.0 41.0 32 35.414364590651736 38.0 34.0 40.0 27.0 41.0 33 35.47779766086705 38.0 34.0 40.0 28.0 41.0 34 35.41561061288589 38.0 34.0 40.0 27.0 41.0 35 35.29008761416704 38.0 34.0 40.0 27.0 41.0 36 35.17409430921189 38.0 34.0 40.0 26.0 41.0 37 35.0067371988263 38.0 34.0 40.0 25.0 41.0 38 34.84354548084473 38.0 33.0 40.0 24.0 41.0 39 34.71553828987064 38.0 33.0 40.0 24.0 41.0 40 34.48877918750258 38.0 33.0 40.0 23.0 41.0 41 34.30189155680456 38.0 33.0 40.0 21.0 41.0 42 34.025804438566766 38.0 33.0 40.0 19.0 41.0 43 33.68330247551349 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 1.0 13 4.0 14 1.0 15 10.0 16 29.0 17 71.0 18 214.0 19 477.0 20 1021.0 21 1994.0 22 3606.0 23 6246.0 24 10072.0 25 15715.0 26 24038.0 27 34542.0 28 48391.0 29 64367.0 30 80818.0 31 98013.0 32 118720.0 33 143312.0 34 172075.0 35 205329.0 36 256097.0 37 338007.0 38 395215.0 39 401314.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.25660205810638 23.44898127867091 14.944125304789848 21.350291358432862 2 17.070917882382115 23.566971112121337 36.996652477579865 22.365458527916683 3 19.906682646609084 26.21614249700376 33.243542587924125 20.633632268463032 4 12.544571641112533 15.76228458073315 35.17320328966401 36.51994048849031 5 10.371037731950242 41.66805802372195 34.40786047857172 13.553043765756085 6 30.830474852254415 35.985246104889036 15.416580567838988 17.767698475017564 7 23.35136587180229 36.92763565731289 21.113981072033724 18.6070173988511 8 28.146464437740214 33.38161755589536 20.201305947018223 18.2706120593462 9 24.89077158325412 13.778980865396537 25.355705252717282 35.97454229863206 10 16.315493656238377 28.65636235897012 33.49601190230194 21.532132082489564 11 30.10732735463074 22.124023639294126 26.056411951894866 21.71223705418027 12 20.19382568086953 28.519857833615735 31.872752820597594 19.413563664917138 13 31.124436913666987 21.494937388932513 30.05322973922387 17.327395958176634 14 20.560028102657355 23.468653138818862 29.78422944993181 26.187089308591975 15 22.323717816258217 29.673554572880935 28.355209323469854 19.647518287391 16 20.763524403851715 28.860023969913623 28.482373847997682 21.894077778236973 17 18.01901062115138 27.87804273257015 28.947844774145555 25.155101872132906 18 19.194528247303385 26.909451584907217 34.58606438814729 19.309955779642106 19 18.287680290945158 25.203165681696078 36.3950076455759 20.114146381782867 20 23.68235731702277 23.707360416580567 34.77550936066455 17.834772905732116 21 22.881927511675002 24.923089639211472 33.085175848245655 19.109807000867875 22 20.594040583543414 24.699962805306445 34.11311319585072 20.59288341529942 23 19.56081332396578 27.136008596106954 35.30470719510683 17.998470884820435 24 17.687895193619045 26.220399223044176 33.53630615365541 22.555399429681366 25 19.281398520477744 27.259164359218087 34.99123858329545 18.46819853700872 26 20.989213538868455 25.852874323263215 33.29602843327685 19.86188370459148 27 19.350911269992146 27.674835723436793 32.70760838120428 20.26664462536678 28 19.0235566392528 27.11803116088771 32.884572467661286 20.973839732198208 29 17.817332727197584 27.16266479315618 33.99173451254288 21.02826796710336 30 17.16365665165103 27.135636649171385 36.7368682068025 18.96383849237509 31 19.010249204446833 26.522254824978305 34.91424556763235 19.553250402942513 32 20.415010125222135 26.87242220109931 32.501880398396494 20.210687275282062 33 21.53056163987271 26.834524941108402 31.71178245237013 19.92313096664876 34 19.23668223333471 30.147580278546926 31.880109104434435 18.735628383683927 35 17.56440881100963 31.198206389221806 32.102368062156465 19.1350167376121 36 18.755920155391166 26.736620242178784 34.78757697235195 19.719882630078107 37 18.8463032607348 27.010207877009545 33.63462412695789 20.508864735297763 38 19.334380295077903 26.633921560524033 34.29325949497872 19.738438649419347 39 20.629086250361613 25.92466008182833 33.97123610364921 19.475017564160847 40 18.44889862379634 26.80770343431004 33.12080009918585 21.622597842707776 41 19.408397735256436 26.264495598627928 32.899243707897675 21.42786295821796 42 16.581642352357733 28.125842046534693 33.41364631979171 21.878869281315865 43 17.278298962681323 27.915981319998345 33.00252097367442 21.803198743645908 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 190.0 1 323.0 2 456.0 3 1308.5 4 2161.0 5 2161.0 6 3891.5 7 5622.0 8 6323.0 9 7024.0 10 10644.0 11 14264.0 12 14264.0 13 25574.5 14 36885.0 15 60565.0 16 84245.0 17 82060.5 18 79876.0 19 79876.0 20 84356.0 21 88836.0 22 70879.0 23 52922.0 24 55917.5 25 58913.0 26 58913.0 27 63144.0 28 67375.0 29 67580.5 30 67786.0 31 72262.5 32 76739.0 33 76739.0 34 82252.0 35 87765.0 36 94076.0 37 100387.0 38 102151.5 39 103916.0 40 103916.0 41 109411.5 42 114907.0 43 135364.5 44 155822.0 45 208802.0 46 261782.0 47 261782.0 48 264390.0 49 266998.0 50 237839.0 51 208680.0 52 188713.0 53 168746.0 54 168746.0 55 142939.5 56 117133.0 57 90461.0 58 63789.0 59 52845.5 60 41902.0 61 41902.0 62 35703.5 63 29505.0 64 24663.0 65 19821.0 66 16495.0 67 13169.0 68 13169.0 69 11182.5 70 9196.0 71 7374.5 72 5553.0 73 4385.5 74 3218.0 75 3218.0 76 2519.0 77 1820.0 78 1409.5 79 999.0 80 808.5 81 618.0 82 618.0 83 469.0 84 320.0 85 243.0 86 166.0 87 140.0 88 114.0 89 114.0 90 89.0 91 64.0 92 38.0 93 12.0 94 7.5 95 3.0 96 3.0 97 2.0 98 1.0 99 0.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2419700.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 33.29909875830914 #Duplication Level Percentage of deduplicated Percentage of total 1 69.2510191000724 23.059965241268635 2 14.443208159466678 9.618916297777947 3 5.948824178277476 5.942714514248367 4 3.0924634792248944 4.119049872046962 5 1.84403123027479 3.0702289025163267 6 1.1437830935099753 2.2852167713323803 7 0.8084621488667667 1.8844742656228504 8 0.5503085258549443 1.4659822359986647 9 0.40448009856224054 1.2121940473015198 >10 2.151769608344019 13.43738065123265 >50 0.20616218170577746 4.76953908879093 >100 0.12805111206379285 8.04324839234423 >500 0.013405333169286632 2.9655851012771897 >1k 0.011901931318525514 8.040738075501002 >5k 0.0012528348756342645 3.102045569812171 >10k+ 8.769844129439852E-4 6.982720972928193 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 40166 1.6599578460139688 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 40033 1.654461296854982 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 34335 1.4189775592015539 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 17634 0.7287680290945158 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 13314 0.5502335000206637 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 11206 0.46311526222258964 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 10690 0.4417903045832128 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 9729 0.4020746373517378 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 8734 0.360953837252552 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 8484 0.35062197793114847 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 8191 0.3385130388064636 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7519 0.3107410009505311 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 7342 0.3034260445509774 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 6630 0.27400090920362025 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 6278 0.25945365127908415 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 6042 0.2497003760796793 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 5408 0.2234987808406001 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4999 0.20659585899078398 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 4719 0.19502417655081208 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4574 0.18903169814439807 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 4415 0.18246063561598547 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3926 0.16225151878332025 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 3849 0.15906930611232797 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 3637 0.15030788940777784 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 3519 0.14543125180807537 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3277 0.1354300119849568 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 3270 0.13514071992395751 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 3192 0.13191717981567963 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 3150 0.13018142744968386 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3141 0.12980948051411334 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 2990 0.12356903748398562 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 2929 0.12104806380956318 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 2904 0.12001487787742281 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 2865 0.11840310782328387 No Hit GCCGAGGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAA 2865 0.11840310782328387 No Hit GGGGAGAAGAGTAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA 2839 0.11732859445385792 No Hit ATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGT 2627 0.10856717774930776 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 2516 0.10397983221060463 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 2502 0.10340124808860603 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 2496 0.10315328346489235 No Hit CTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTG 2490 0.10290531884117866 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 2462 0.10174815059718148 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 2458 0.10158284084803902 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 2456 0.1015001859734678 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 4.132743728561392E-5 0.0 0.0 0.0 0.0 6 1.2398231185684175E-4 0.0 0.0 0.0 0.0 7 1.2398231185684175E-4 0.0 0.0 4.132743728561392E-5 0.0 8 1.2398231185684175E-4 0.0 0.0 4.132743728561392E-5 0.0 9 1.2398231185684175E-4 0.0 0.0 4.132743728561392E-5 0.0 10 1.2398231185684175E-4 0.0 0.0 1.2398231185684175E-4 0.0 11 1.2398231185684175E-4 0.0 0.0 2.066371864280696E-4 0.0 12 1.6530974914245568E-4 0.0 0.0 2.8929206099929743E-4 0.0 13 1.6530974914245568E-4 0.0 0.0 3.3061949828491137E-4 0.0 14 2.066371864280696E-4 0.0 0.0 5.372566847129809E-4 0.0 15 2.066371864280696E-4 0.0 0.0 0.001115840806711576 0.0 16 2.066371864280696E-4 0.0 0.0 0.0019423895524238542 0.0 17 2.066371864280696E-4 0.0 0.0 0.003223540108277886 0.0 18 2.066371864280696E-4 0.0 0.0 0.003760796792990867 0.0 19 2.066371864280696E-4 0.0 0.0 0.004463363226846304 0.0 20 2.066371864280696E-4 0.0 0.0 0.005744513782700335 0.0 21 2.066371864280696E-4 0.0 0.0 0.007769558209695417 0.0 22 2.066371864280696E-4 0.0 0.0 0.012108939124684878 0.0 23 2.066371864280696E-4 0.0 0.0 0.020002479646237137 0.0 24 2.066371864280696E-4 0.0 0.0 0.03215274620820763 0.0 25 2.066371864280696E-4 0.0 0.0 0.03913708310947638 0.0 26 2.066371864280696E-4 0.0 0.0 0.04975823449187916 0.0 27 2.066371864280696E-4 0.0 0.0 0.14055461420837295 0.0 28 2.066371864280696E-4 0.0 0.0 0.23548373765342812 0.0 29 2.066371864280696E-4 0.0 0.0 0.3408687027317436 0.0 30 2.066371864280696E-4 0.0 0.0 0.5558953589287928 0.0 31 2.066371864280696E-4 0.0 0.0 0.8709344133570277 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 8295 0.0 29.996986 1 GTATTGG 585 0.0 23.40171 1 GTCGTCA 60 3.728479E-5 21.583332 24 ATTGGAC 625 0.0 21.312 3 ACGGACC 45 0.0038270112 20.555557 8 GGACCCT 1430 0.0 19.01748 6 CGTCTGT 965 0.0 18.979275 34 TGCGTCG 50 0.0070370734 18.5 10 TTGGACC 1440 0.0 18.371529 4 GACCCTC 1370 0.0 18.364964 7 TGGACCC 1530 0.0 17.53268 5 GAGCACG 75 2.0684558E-4 17.266666 9 GTTATCA 290 0.0 17.224138 1 TGCGACG 65 0.0015806167 17.076923 22 GCGCGTG 120 1.042572E-7 16.958332 8 GTATCAA 14740 0.0 16.893488 2 TTTTTAC 2310 0.0 16.41775 1 TATTGGA 840 0.0 16.297619 2 AACGGTA 80 3.3844975E-4 16.1875 18 CGTTTAG 150 4.6784407E-9 16.033333 26 >>END_MODULE