##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088203_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3043699 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.067070364053738 31.0 31.0 33.0 30.0 34.0 2 31.19778006957981 31.0 31.0 34.0 28.0 34.0 3 31.236915673987475 31.0 31.0 34.0 28.0 34.0 4 35.199470775526756 37.0 35.0 37.0 33.0 37.0 5 35.08068044836234 35.0 35.0 37.0 32.0 37.0 6 35.141983487854745 37.0 35.0 37.0 32.0 37.0 7 34.97056804894308 37.0 35.0 37.0 32.0 37.0 8 35.05129876508814 37.0 35.0 37.0 32.0 37.0 9 36.50745260947288 38.0 35.0 39.0 32.0 39.0 10 36.38586272821327 38.0 35.0 39.0 32.0 39.0 11 36.4106483591183 38.0 35.0 39.0 32.0 39.0 12 36.25360063527964 38.0 35.0 39.0 32.0 39.0 13 36.313337816912906 38.0 35.0 39.0 32.0 39.0 14 37.20859158543601 39.0 36.0 41.0 31.0 41.0 15 37.255160579281984 39.0 36.0 41.0 32.0 41.0 16 37.21869015300133 39.0 36.0 41.0 32.0 41.0 17 37.35224968040532 39.0 36.0 41.0 32.0 41.0 18 37.371193406443936 39.0 36.0 41.0 32.0 41.0 19 37.4779319505641 39.0 36.0 41.0 32.0 41.0 20 37.440749233087764 39.0 36.0 41.0 32.0 41.0 21 37.322873582440316 39.0 36.0 41.0 31.0 41.0 22 37.28043081789625 39.0 36.0 41.0 31.0 41.0 23 37.16093805596414 39.0 36.0 40.0 31.0 41.0 24 37.071676601398494 39.0 36.0 40.0 31.0 41.0 25 36.99452442570701 39.0 35.0 40.0 31.0 41.0 26 36.69819486092416 38.0 35.0 40.0 30.0 41.0 27 36.52126540765036 38.0 35.0 40.0 30.0 41.0 28 36.34397783749313 38.0 35.0 40.0 30.0 41.0 29 36.19283181418399 38.0 35.0 40.0 30.0 41.0 30 36.000834839450285 38.0 35.0 40.0 30.0 41.0 31 35.69367371740767 38.0 34.0 40.0 29.0 41.0 32 35.42366344372423 38.0 34.0 40.0 27.0 41.0 33 35.50865345094899 38.0 34.0 40.0 28.0 41.0 34 35.466621042356685 38.0 34.0 40.0 27.0 41.0 35 35.34283613458492 38.0 34.0 40.0 27.0 41.0 36 35.22768282934679 38.0 34.0 40.0 26.0 41.0 37 35.065515348265386 38.0 34.0 40.0 25.0 41.0 38 34.91093895947004 38.0 34.0 40.0 25.0 41.0 39 34.792109535141286 38.0 33.0 40.0 24.0 41.0 40 34.56873429337132 38.0 33.0 40.0 23.0 41.0 41 34.38782941414377 38.0 33.0 40.0 22.0 41.0 42 34.12633575133415 38.0 33.0 40.0 21.0 41.0 43 33.78380582311194 37.0 33.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 12 1.0 13 1.0 14 7.0 15 8.0 16 39.0 17 124.0 18 216.0 19 622.0 20 1194.0 21 2417.0 22 4356.0 23 7747.0 24 12481.0 25 19550.0 26 30000.0 27 43225.0 28 60345.0 29 80555.0 30 101827.0 31 123263.0 32 148641.0 33 179675.0 34 216738.0 35 259159.0 36 324074.0 37 422548.0 38 507170.0 39 497716.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.871189956694145 23.19503341164813 14.43132188826819 21.50245474338954 2 17.32270503752178 23.517437171021182 36.694627162541366 22.465230628915673 3 20.200223478077167 26.420220921976846 32.859392469491894 20.520163130454094 4 12.608934063453711 15.542338450681225 35.123183994212305 36.72554349165276 5 10.458097203435686 41.56274979884673 34.41831797428064 13.560835023436942 6 31.077941675573044 35.689567200961726 15.426689695663073 17.805801427802155 7 23.53393026051525 36.53518301251208 21.107277690730918 18.823609036241756 8 28.347349721506625 33.01288990797053 20.345737209888362 18.294023160634477 9 25.067524745383825 13.40799468015727 24.865467971701538 36.65901260275737 10 16.441901778066754 28.00681013464209 33.44512712985088 22.10616095744027 11 30.496281005447646 21.505937347944066 26.056617293628577 21.941164352979715 12 20.165791689651307 27.837739539947936 32.135799236389666 19.860669534011084 13 31.45393154842184 20.876538711613733 30.013250324687164 17.656279415277265 14 20.686473925312587 22.76417608968561 29.53659346735666 27.012756517645144 15 22.63141000473437 28.842898065807425 28.444928358553195 20.08076357090501 16 21.052771643976623 28.59911574699075 28.225097159738855 22.12301544929377 17 18.3203398233531 26.987031240605592 28.7564243376234 25.936204598417913 18 19.638669921040155 26.271224585611126 34.383689057295086 19.70641643605363 19 18.535472791494822 24.49926881731735 35.957563477860326 21.0076949133275 20 24.225292974108147 23.039268994733053 34.41158274849123 18.32385528266757 21 23.370937796411535 24.30979541669528 32.74788341422723 19.571383372665956 22 21.140395288758842 23.716964128187445 33.99688996842329 21.145750614630423 23 19.87795113774391 26.300169629125612 35.27385592333539 18.548023309795088 24 18.30203972206187 25.234722618760923 33.35707637318933 23.106161285987874 25 19.759969694769424 26.413912808066765 34.812213691301274 19.013903805862537 26 21.623393114759377 25.01860400782075 32.95785818505706 20.40014469236281 27 19.89142158932273 26.939194710120812 32.500585636096076 20.668798064460383 28 19.48057281616875 26.256111396034893 32.5842667096845 21.679049078111863 29 18.36755211339886 26.221515333809286 33.84477242986248 21.56616012292937 30 17.559620711509254 26.32214946353105 36.53623436483043 19.58199546012927 31 19.383946967160682 25.712233699850085 34.83787325882093 20.065946074168306 32 20.954240218891552 25.980295686268583 32.21287650322847 20.85258759161139 33 22.079844294721653 25.935514648458994 31.497004138714114 20.48763691810524 34 19.603679601695173 29.676949001855967 31.607724679740013 19.111646716708847 35 18.010026615641035 30.66025911234981 31.776959548233908 19.552754723775248 36 19.234293535596 26.07110624276579 34.60128613243294 20.093314089205272 37 19.45379618681085 26.586827409674875 33.218724979046875 20.740651424467398 38 19.850977379826322 25.96577388237142 33.956642887486574 20.226605850315686 39 21.222335060069998 25.2994136410992 33.652243536565216 19.826007762265586 40 18.98535301946743 26.428927433363153 32.41920439570404 22.166515151465372 41 20.335190831944946 25.793614940242122 32.20837540111555 21.662818826697382 42 17.305127740949416 27.822954897971186 32.84477210131488 22.027145259764517 43 18.16027143288479 27.624742131202858 32.23265506871738 21.98233136719498 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 268.0 1 407.5 2 547.0 3 1507.5 4 2468.0 5 2468.0 6 4451.0 7 6434.0 8 7175.5 9 7917.0 10 12145.0 11 16373.0 12 16373.0 13 30272.0 14 44171.0 15 72688.5 16 101206.0 17 98352.0 18 95498.0 19 95498.0 20 99632.0 21 103766.0 22 81560.0 23 59354.0 24 63603.0 25 67852.0 26 67852.0 27 71918.5 28 75985.0 29 77862.5 30 79740.0 31 84327.5 32 88915.0 33 88915.0 34 95268.5 35 101622.0 36 109504.0 37 117386.0 38 122418.5 39 127451.0 40 127451.0 41 136519.0 42 145587.0 43 170984.5 44 196382.0 45 264614.5 46 332847.0 47 332847.0 48 337906.0 49 342965.0 50 306192.0 51 269419.0 52 246593.5 53 223768.0 54 223768.0 55 190466.0 56 157164.0 57 122855.5 58 88547.0 59 73547.0 60 58547.0 61 58547.0 62 50234.0 63 41921.0 64 36345.0 65 30769.0 66 26155.5 67 21542.0 68 21542.0 69 17899.5 70 14257.0 71 11938.0 72 9619.0 73 7752.5 74 5886.0 75 5886.0 76 4559.0 77 3232.0 78 2520.5 79 1809.0 80 1482.5 81 1156.0 82 1156.0 83 850.0 84 544.0 85 436.5 86 329.0 87 285.0 88 241.0 89 241.0 90 204.5 91 168.0 92 101.0 93 34.0 94 21.0 95 8.0 96 8.0 97 6.0 98 4.0 99 2.5 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3043699.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 34.70016727864178 #Duplication Level Percentage of deduplicated Percentage of total 1 71.11198268029712 24.67597694522187 2 13.853171935465907 9.614147670009054 3 5.761084858892131 5.99731824930022 4 2.8594586935657405 3.968947799723907 5 1.641088500724271 2.8473022747093824 6 1.0362323179784199 2.1574460864031533 7 0.6736535362780248 1.6363123277687228 8 0.47389027449000215 1.3155257437219634 9 0.3504276896302939 1.0943909504315246 >10 1.8923250595864483 12.418026543003148 >50 0.19544973054883708 4.7074560787811475 >100 0.1279527107052012 8.2564757540696 >500 0.011736424000136867 2.8675118004867284 >1k 0.009541808130192226 7.354180255524405 >5k 7.633446504153781E-4 1.8127190814969478 >10k+ 0.0012404350569249893 9.276262439348093 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 49409 1.6233208342874905 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 48695 1.599862535684376 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 42644 1.4010583832369758 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 25864 0.8497555113038444 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 17133 0.5629006021948951 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 14293 0.4695930839416118 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 13430 0.44123942610619515 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 13180 0.4330257361191104 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 13072 0.4294774220446897 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 11192 0.36771047334181206 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 10806 0.3550285360017531 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 10339 0.3396853631058787 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 10106 0.3320302040379157 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 8487 0.2788383476815546 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 8151 0.2677991483389126 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 7591 0.24940048276784268 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 7246 0.23806559058566568 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 6311 0.20734639003396854 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5967 0.19604435261173983 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 5697 0.18717356742568828 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 5298 0.17406451820630095 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 4864 0.15980555238872177 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 4809 0.1579985405915631 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 4565 0.14998197916416833 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4496 0.14771500072773294 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 4491 0.14755072692799123 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3984 0.13089336363418327 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 3902 0.12819927331841946 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 3759 0.12350104264580695 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 3733 0.12264681888715015 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 3711 0.12192401416828667 No Hit CCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTG 3678 0.1208398070899915 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 3578 0.11755433109515757 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 3374 0.11085196006569636 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 3334 0.10953776966776281 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 3329 0.10937349586802113 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 3327 0.10930778634812444 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 3235 0.10628514843287723 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 3064 0.10066698448171123 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 3.2854759948339176E-5 0.0 3 0.0 0.0 0.0 6.570951989667835E-5 0.0 4 0.0 0.0 0.0 9.856427984501752E-5 0.0 5 0.0 0.0 0.0 1.314190397933567E-4 0.0 6 3.2854759948339176E-5 0.0 0.0 1.314190397933567E-4 0.0 7 3.2854759948339176E-5 0.0 0.0 1.314190397933567E-4 0.0 8 3.2854759948339176E-5 0.0 0.0 1.314190397933567E-4 0.0 9 3.2854759948339176E-5 0.0 0.0 2.628380795867134E-4 0.0 10 3.2854759948339176E-5 0.0 0.0 3.6140235943173094E-4 0.0 11 6.570951989667835E-5 0.0 0.0 8.542237586568186E-4 0.0 12 6.570951989667835E-5 0.0 0.0 0.0012156261180885494 0.0 13 6.570951989667835E-5 0.0 0.0 0.0014127546777785846 0.0 14 6.570951989667835E-5 0.0 0.0 0.001675592757365298 0.0 15 6.570951989667835E-5 0.0 0.0 0.002496961756073777 0.0 16 6.570951989667835E-5 0.0 0.0 0.0038440069139556833 0.0 17 6.570951989667835E-5 0.0 0.0 0.006012421070546069 0.0 18 6.570951989667835E-5 0.0 0.0 0.00676808054935787 0.0 19 6.570951989667835E-5 0.0 0.0 0.008115125707239776 0.0 20 6.570951989667835E-5 0.0 0.0 0.010480668423520197 0.0 21 6.570951989667835E-5 0.0 0.0 0.014653222936959273 0.0 22 6.570951989667835E-5 0.0 0.0 0.02349115336306251 0.0 23 6.570951989667835E-5 0.0 0.0 0.03643592878270815 0.0 24 6.570951989667835E-5 0.0 0.0 0.05529456099305483 0.0 25 6.570951989667835E-5 0.0 0.0 0.06344254146024295 0.0 26 6.570951989667835E-5 0.0 0.0 0.0742189027232982 0.0 27 6.570951989667835E-5 0.0 0.0 0.15819566915125313 0.0 28 6.570951989667835E-5 0.0 0.0 0.2382627191453557 0.0 29 6.570951989667835E-5 0.0 0.0 0.32946753276194524 0.0 30 6.570951989667835E-5 0.0 0.0 0.5144726860310431 0.0 31 6.570951989667835E-5 0.0 0.0 0.7362094609223843 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 10805 0.0 29.27811 1 GTATTGG 920 0.0 24.733696 1 ATTGGAC 950 0.0 22.978947 3 TTGGACC 1875 0.0 20.621334 4 ACGCATA 65 6.9069116E-5 19.923077 7 GGACCCT 1875 0.0 19.634668 6 TATTGGA 1215 0.0 18.576132 2 CTAGACG 50 0.007037482 18.5 4 ATCACGT 210 0.0 18.5 23 TGGACCC 2060 0.0 18.140778 5 GACCCTC 2035 0.0 17.545454 7 TTTTTAC 2410 0.0 17.195023 1 CGTGTCT 370 0.0 17.0 35 TATACTG 415 0.0 16.939758 5 CGTCTGT 1190 0.0 16.789915 34 GTATCAA 18875 0.0 16.770065 2 ACGTTTA 235 0.0 16.531916 26 CTAGCGG 80 3.384857E-4 16.1875 29 GTTATCA 415 0.0 16.048193 1 CGAACGA 70 0.0025938107 15.857142 16 >>END_MODULE