##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088202_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2360960 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.085391959203037 31.0 31.0 33.0 30.0 34.0 2 31.233006488885877 31.0 31.0 34.0 28.0 34.0 3 31.283790915559774 31.0 31.0 34.0 28.0 34.0 4 35.24689660138249 37.0 35.0 37.0 33.0 37.0 5 35.10938601246951 35.0 35.0 37.0 32.0 37.0 6 35.15993028259691 37.0 35.0 37.0 32.0 37.0 7 34.99605541813499 37.0 35.0 37.0 32.0 37.0 8 35.05274379913256 37.0 35.0 37.0 32.0 37.0 9 36.53783969232855 39.0 35.0 39.0 32.0 39.0 10 36.39813677487124 38.0 35.0 39.0 32.0 39.0 11 36.42714404310111 38.0 35.0 39.0 32.0 39.0 12 36.25959482583356 38.0 35.0 39.0 32.0 39.0 13 36.30993578883166 38.0 35.0 39.0 32.0 39.0 14 37.21638274261318 39.0 36.0 41.0 32.0 41.0 15 37.27588184467335 39.0 36.0 41.0 32.0 41.0 16 37.25556637977772 39.0 36.0 41.0 32.0 41.0 17 37.3517001558688 39.0 36.0 41.0 32.0 41.0 18 37.370370950799675 39.0 36.0 41.0 32.0 41.0 19 37.47089785510978 39.0 36.0 41.0 32.0 41.0 20 37.43052402412578 39.0 36.0 41.0 32.0 41.0 21 37.298181671862295 39.0 36.0 41.0 31.0 41.0 22 37.2550589590675 39.0 36.0 41.0 31.0 41.0 23 37.13095266332339 39.0 36.0 40.0 31.0 41.0 24 37.05166500067769 39.0 36.0 40.0 31.0 41.0 25 36.96731880252101 39.0 35.0 40.0 31.0 41.0 26 36.70030750203307 38.0 35.0 40.0 30.0 41.0 27 36.532002236378425 38.0 35.0 40.0 30.0 41.0 28 36.371150294795335 38.0 35.0 40.0 30.0 41.0 29 36.22770864394145 38.0 35.0 40.0 30.0 41.0 30 36.03725137232312 38.0 35.0 40.0 30.0 41.0 31 35.76908884521551 38.0 34.0 40.0 29.0 41.0 32 35.46604643873678 38.0 34.0 40.0 27.0 41.0 33 35.60696411629168 38.0 34.0 40.0 28.0 41.0 34 35.574351111412305 38.0 34.0 40.0 28.0 41.0 35 35.48276124966115 38.0 34.0 40.0 27.0 41.0 36 35.37875567565736 38.0 34.0 40.0 27.0 41.0 37 35.23669270127406 38.0 34.0 40.0 26.0 41.0 38 35.09958576172404 38.0 34.0 40.0 25.0 41.0 39 35.01118358633776 38.0 34.0 40.0 25.0 41.0 40 34.840587727026296 38.0 33.0 40.0 24.0 41.0 41 34.68546735226349 38.0 33.0 40.0 23.0 41.0 42 34.45569217606398 38.0 33.0 40.0 22.0 41.0 43 34.133939583898076 38.0 33.0 40.0 21.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 3.0 15 11.0 16 19.0 17 65.0 18 174.0 19 412.0 20 865.0 21 1737.0 22 3166.0 23 5608.0 24 9264.0 25 14594.0 26 22315.0 27 32083.0 28 44533.0 29 59578.0 30 76982.0 31 93944.0 32 114329.0 33 138997.0 34 167940.0 35 201669.0 36 250797.0 37 327614.0 38 397868.0 39 396391.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.76193582271618 22.690431011114125 14.152505760368664 22.39512740580103 2 17.523380319869883 23.025972485768502 36.526074139333154 22.924573055028464 3 19.810077256709135 26.135427961507183 32.35781207644348 21.6966827053402 4 13.084762130658714 15.672099484955273 35.355406275413394 35.88773210897262 5 11.03559568988886 40.83309331797235 34.62629608294931 13.505014909189484 6 31.468470452697204 36.07803605313093 15.526141908376253 16.92735158579561 7 24.288128557874764 35.59903598536189 21.465547912713472 18.647287544049878 8 27.711693548387096 33.47125745459474 20.296574274871237 18.520474722146922 9 25.374339251829763 13.509081051775548 24.07402073732719 37.04255895906749 10 16.340217538628355 27.81317769043101 33.69701307942532 22.149591691515315 11 31.24580679045812 21.868689007861207 25.269509013282732 21.61599518839794 12 20.228212252642994 27.720164678774733 31.695496747085933 20.35612632149634 13 31.045337489834644 21.1608413526701 28.846443819463268 18.947377338031988 14 20.921870764434804 22.584414814312822 28.879862428842507 27.613851992409867 15 22.832068311195446 29.157080170777988 27.305714624559503 20.705136893467063 16 21.695539102737868 28.302978449444293 27.456204255895905 22.54527819192193 17 19.11298793711033 27.20999085117918 28.339954933586338 25.337066278124155 18 20.126304554079695 26.62281444835999 32.90085388994307 20.35002710761724 19 19.512147600975872 24.942608091623747 34.373305773922475 21.171938533477906 20 24.005785782054758 23.965674979669288 32.849476484142045 19.17906275413391 21 23.408105177554894 24.856244917321767 31.57842572512876 20.15722417999458 22 21.642213336947684 24.539424640824073 32.419397194361615 21.39896482786663 23 20.60763418270534 26.5601704391434 33.52267721604771 19.30951816210355 24 19.31117003252914 25.66828747628083 31.910282258064516 23.11026023312551 25 20.358582949308758 26.644881743019788 33.196115139604224 19.800420168067227 26 21.90791034155598 25.524405326646786 31.681392314990514 20.886292016806724 27 20.4312652480347 27.045650921658986 31.29786188669016 21.225221943616155 28 20.174039373814043 26.519212523719165 31.56063635131472 21.74611175115207 29 19.32603686635945 26.42768195988073 32.411349620493354 21.83493155326647 30 18.638901124966115 26.6966827053402 34.44459033613445 20.21982583355923 31 20.165568243426403 26.060500813228515 33.269602195717 20.504328747628083 32 21.159570683111955 26.36990885063703 31.178037747357006 21.29248271889401 33 22.07047133369477 26.175581119544596 30.797811059907833 20.956136486852806 34 20.362776158850636 28.833398278666305 30.804842098129576 19.998983464353483 35 18.948605651938195 29.74146110056926 30.967996069395497 20.341937178097044 36 19.934136961236106 26.12687211981567 33.211786730821366 20.727204188126862 37 19.965564854974247 26.340852873407428 32.26882285172133 21.42475941989699 38 20.38073495527243 25.956136486852806 32.88827426131743 20.774854296557333 39 21.225857278395228 25.395982989970182 32.808137367850364 20.570022363784226 40 19.425064380590946 26.175665830848466 32.091733870967744 22.307535917592844 41 20.28793372187585 25.714455136893466 31.861785036595286 22.135826104635402 42 17.920337489834644 27.337184873949578 32.26166474654378 22.480812889672 43 18.544363309840065 27.090547912713475 31.999229127134726 22.365859650311737 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 200.0 1 317.5 2 435.0 3 1226.5 4 2018.0 5 2018.0 6 3429.0 7 4840.0 8 5279.5 9 5719.0 10 8727.0 11 11735.0 12 11735.0 13 20661.0 14 29587.0 15 47912.0 16 66237.0 17 64941.0 18 63645.0 19 63645.0 20 66331.0 21 69017.0 22 55485.5 23 41954.0 24 45135.0 25 48316.0 26 48316.0 27 52549.0 28 56782.0 29 59323.0 30 61864.0 31 66476.0 32 71088.0 33 71088.0 34 78194.0 35 85300.0 36 94711.5 37 104123.0 38 107472.5 39 110822.0 40 110822.0 41 117249.5 42 123677.0 43 141462.5 44 159248.0 45 200148.0 46 241048.0 47 241048.0 48 243496.5 49 245945.0 50 220773.5 51 195602.0 52 180285.0 53 164968.0 54 164968.0 55 143901.0 56 122834.0 57 100006.5 58 77179.0 59 67069.0 60 56959.0 61 56959.0 62 50694.5 63 44430.0 64 39021.0 65 33612.0 66 28227.0 67 22842.0 68 22842.0 69 19112.5 70 15383.0 71 12620.5 72 9858.0 73 7826.5 74 5795.0 75 5795.0 76 4640.5 77 3486.0 78 2741.0 79 1996.0 80 1570.0 81 1144.0 82 1144.0 83 856.5 84 569.0 85 454.0 86 339.0 87 279.0 88 219.0 89 219.0 90 154.5 91 90.0 92 65.5 93 41.0 94 25.5 95 10.0 96 10.0 97 6.5 98 3.0 99 2.0 100 1.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2360960.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 39.18311264182222 #Duplication Level Percentage of deduplicated Percentage of total 1 72.77753676513701 28.516504208627218 2 13.563401359342183 10.629125665386988 3 5.318301516931379 6.251628222032886 4 2.5964614522222744 4.069497662102988 5 1.4532773442676028 2.847196494012287 6 0.8677926592485249 2.0401690510248844 7 0.5868056791542142 1.6095011117612399 8 0.4341931020128796 1.3610429779578292 9 0.3023726028566858 1.0663109781781044 >10 1.7973981411073918 13.59693874428305 >50 0.18584435082546735 5.0476098805353 >100 0.09939795820990116 7.362175261995733 >500 0.008063690396581216 2.135636722257462 >1k 0.007627815240009259 5.854705165993552 >5k 9.807191022869048E-4 2.649243306527825 >10k+ 5.44843945714947E-4 4.962714547322661 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 31446 1.3319158308484684 No Hit GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 31218 1.3222587422065601 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 27639 1.1706678639197614 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 14822 0.6277954730279208 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 11105 0.47035951477365134 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 8167 0.3459186093792356 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 7970 0.3375745459474112 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7883 0.3338896042287883 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 7812 0.33088235294117646 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 6706 0.2840370018975332 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6461 0.27365986717267554 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 6208 0.26294388723231227 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 5707 0.24172370561127676 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5133 0.21741156139875303 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 4812 0.20381539712659258 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4717 0.19979161019246408 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4159 0.17615715641095148 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4017 0.17014265383572785 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3756 0.15908782867985902 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3596 0.1523109243697479 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 3140 0.13299674708593115 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 3057 0.12948122797506098 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2957 0.12524566278124152 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 2841 0.12033240715641094 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2799 0.11855346977500678 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2710 0.11478381675250746 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 2675 0.11330136893467065 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 2476 0.10487259419896991 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 4.2355651938194635E-5 0.0 5 0.0 0.0 0.0 8.471130387638927E-5 0.0 6 4.2355651938194635E-5 0.0 0.0 8.471130387638927E-5 0.0 7 4.2355651938194635E-5 0.0 0.0 8.471130387638927E-5 0.0 8 4.2355651938194635E-5 0.0 0.0 8.471130387638927E-5 0.0 9 4.2355651938194635E-5 0.0 0.0 1.6942260775277854E-4 0.0 10 4.2355651938194635E-5 0.0 0.0 2.964895635673624E-4 0.0 11 4.2355651938194635E-5 0.0 0.0 5.929791271347248E-4 0.0 12 4.2355651938194635E-5 0.0 0.0 9.31824342640282E-4 0.0 13 4.2355651938194635E-5 0.0 0.0 0.001143602602331255 0.0 14 4.2355651938194635E-5 0.0 0.0 0.0015671591217132014 0.0 15 4.2355651938194635E-5 0.0 0.0 0.0024989834643534834 0.0 16 4.2355651938194635E-5 0.0 0.0 0.003091962591488208 0.0 17 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.004362632149634047 0.0 18 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.005040322580645161 0.0 19 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.005929791271347249 0.0 20 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.007581661696936839 0.0 21 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.010250067769043102 0.0 22 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.01728110599078341 0.0 23 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.02770059636757929 0.0 24 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.04519348061805367 0.0 25 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.052351585795608564 0.0 26 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.06217809704526972 0.0 27 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.14396686093792355 0.0 28 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.2296099891569531 0.0 29 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.3330001355380862 0.0 30 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.5319869883437246 0.0 31 4.2355651938194635E-5 4.2355651938194635E-5 0.0 0.8214878693412849 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 6865 0.0 29.535324 1 ATTGGAC 760 0.0 20.203947 3 TGCGACG 65 6.906072E-5 19.923077 22 GTATTGG 760 0.0 19.717106 1 CGAATTA 165 3.6379788E-12 17.939394 15 CACGGTA 65 0.0015806013 17.076923 32 TAGTGCG 65 0.0015806013 17.076923 7 CGTCTGT 685 0.0 17.014599 34 TTGGACC 1265 0.0 16.671936 4 CCGAATT 190 1.8189894E-12 16.552631 14 GTATCAA 12305 0.0 16.477856 2 ACGTTTA 135 2.2226232E-8 16.444445 26 ACGGACC 125 1.6597733E-7 16.28 8 CAATGCG 80 3.3844556E-4 16.1875 19 TGGACCC 1245 0.0 15.899598 5 TATACTG 280 0.0 15.857143 5 GACCCTC 1240 0.0 15.665322 7 TACCCCG 130 2.5921508E-7 15.653846 5 GGACCCT 1275 0.0 15.525491 6 TATACTC 350 0.0 14.8 5 >>END_MODULE