##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088201_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 2607101 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.14675419172483 31.0 31.0 34.0 30.0 34.0 2 31.30481366084398 31.0 31.0 34.0 30.0 34.0 3 31.368624383942166 31.0 31.0 34.0 28.0 34.0 4 35.30956031239296 37.0 35.0 37.0 33.0 37.0 5 35.16991670058045 37.0 35.0 37.0 32.0 37.0 6 35.210475927092965 37.0 35.0 37.0 32.0 37.0 7 35.058576940440744 37.0 35.0 37.0 32.0 37.0 8 35.10661497195544 37.0 35.0 37.0 32.0 37.0 9 36.64397351694468 39.0 35.0 39.0 32.0 39.0 10 36.478046688639985 38.0 35.0 39.0 32.0 39.0 11 36.49950692359061 38.0 35.0 39.0 32.0 39.0 12 36.34063390716355 38.0 35.0 39.0 32.0 39.0 13 36.39497088912167 38.0 35.0 39.0 32.0 39.0 14 37.36342473881909 39.0 36.0 41.0 32.0 41.0 15 37.426139608707146 39.0 36.0 41.0 32.0 41.0 16 37.404776416410414 39.0 36.0 41.0 32.0 41.0 17 37.45633176466888 39.0 36.0 41.0 32.0 41.0 18 37.45458538046665 39.0 36.0 41.0 32.0 41.0 19 37.53360571761508 39.0 36.0 41.0 32.0 41.0 20 37.49660945241477 39.0 36.0 41.0 32.0 41.0 21 37.36832328321764 39.0 36.0 41.0 31.0 41.0 22 37.31804099649381 39.0 36.0 41.0 31.0 41.0 23 37.21805330902025 39.0 36.0 41.0 31.0 41.0 24 37.1240458271467 39.0 36.0 41.0 31.0 41.0 25 37.048675137633715 39.0 36.0 40.0 31.0 41.0 26 36.8099252771565 39.0 35.0 40.0 30.0 41.0 27 36.66035914987567 39.0 35.0 40.0 30.0 41.0 28 36.53230120352069 38.0 35.0 40.0 30.0 41.0 29 36.40646296403553 38.0 35.0 40.0 30.0 41.0 30 36.250185550924186 38.0 35.0 40.0 30.0 41.0 31 36.04693680835533 38.0 35.0 40.0 29.0 41.0 32 35.75882292247213 38.0 34.0 40.0 28.0 41.0 33 35.963185929505606 38.0 35.0 40.0 29.0 41.0 34 35.9777921914034 38.0 35.0 40.0 29.0 41.0 35 35.907964056628416 38.0 35.0 40.0 29.0 41.0 36 35.842397743700765 38.0 35.0 40.0 29.0 41.0 37 35.7338384665573 38.0 35.0 40.0 28.0 41.0 38 35.63259344382899 38.0 34.0 40.0 27.0 41.0 39 35.632967038868074 38.0 34.0 40.0 27.0 41.0 40 35.52394786393009 38.0 34.0 40.0 27.0 41.0 41 35.42610125192695 38.0 34.0 40.0 26.0 41.0 42 35.24972488599406 38.0 34.0 40.0 25.0 41.0 43 34.968501412104864 38.0 34.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 7.0 15 17.0 16 25.0 17 90.0 18 184.0 19 426.0 20 856.0 21 1669.0 22 3094.0 23 5231.0 24 8831.0 25 13801.0 26 21268.0 27 31142.0 28 43600.0 29 59493.0 30 76641.0 31 95821.0 32 118193.0 33 144969.0 34 178469.0 35 217775.0 36 272573.0 37 356629.0 38 470157.0 39 486138.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.67126666745937 22.637289464428115 13.476961575328305 23.214482292784208 2 17.22299979939404 23.114256026137845 36.97750873479777 22.685235439670347 3 19.352453165412463 26.65355120495907 31.95982817696744 22.03416745266102 4 12.814770122062782 16.29664520093391 37.16653094759275 33.72205372941056 5 11.596482069547747 39.93723296489089 35.4495663957783 13.016718569783064 6 31.01184035447802 37.59305834334765 16.12377119260052 15.271330109573814 7 24.87659664892154 34.41051957710883 22.655355507899387 18.057528266070243 8 26.38996341146737 34.77441035080728 20.861792466037947 17.973833771687403 9 25.29284442758451 13.983271073886282 23.254756911987684 37.46912758654153 10 15.74369385766029 27.441552897260213 34.87375441150918 21.940998833570312 11 31.95046912260016 22.431045057326127 24.953271852528918 20.665213967544794 12 19.661378673093218 27.203549076157767 32.35037691290057 20.78469533784844 13 29.880583836222684 21.15802187947456 28.499432895004833 20.461961389297922 14 20.634106618807632 22.757154402533693 28.339561835157134 28.26917714350154 15 22.79305634879508 29.461459299045185 26.244591214532925 21.50089313762681 16 21.80299113843307 28.933401506117328 26.95008747263723 22.313519882812365 17 19.720141260350097 27.618799578535697 28.23569167439236 24.425367486721843 18 20.810317667017884 26.93700781059115 31.411441290536885 20.84123323185408 19 20.219546538473192 25.897308926658386 32.272474292327 21.610670242541428 20 23.427477493200303 25.23599967933732 31.217355982756327 20.119166844706054 21 23.246932128828153 25.776216571586602 30.280146415501356 20.696704884083893 22 21.875677236900295 25.49126405152696 31.095841703102412 21.53721700847033 23 20.965624270022527 26.74986508002567 31.92235360271812 20.36215704723369 24 20.25575533897613 26.29936469664965 30.668278674282277 22.776601290091943 25 21.19208270028664 26.895122206619536 31.259088159607167 20.653706933486657 26 22.030446844982222 26.350992922790482 30.349418760531332 21.269141471695956 27 21.156257467585643 27.33657038986982 30.098488704503584 21.408683438040953 28 20.981580690583144 26.802797436693094 30.313248316808593 21.902373555915172 29 20.24025919977784 26.872645133425976 31.058290415292696 21.82880525150349 30 19.795704117331855 27.123153264871597 32.21064316265461 20.87049945514194 31 20.926922278806998 26.659266365207944 31.439710237539703 20.974101118445354 32 21.3688691001998 26.63318375467617 30.114713622525557 21.883233522598474 33 22.061669264059965 26.538864432179647 30.001561120953884 21.397905182806497 34 21.05883124589343 28.35897036593519 29.874868675973808 20.707329712197573 35 20.251497736374617 29.138802064055056 30.121502772619856 20.48819742695047 36 20.726047820932138 26.70905346589948 31.377303756164416 21.187594957003967 37 20.916987872736804 26.59498040160316 30.861366705777797 21.62666501988224 38 20.9614817377616 26.24202131025994 31.48688907717806 21.309607874800403 39 21.52333185404018 25.86221247278107 31.526434917557854 21.0880207556209 40 20.397560355352553 26.40181565654725 31.056756144084947 22.14386784401525 41 20.989021905940735 26.009349081604434 30.920704644737583 22.080924367717248 42 19.36599310882087 27.336071751727303 31.204583174951793 22.093351964500034 43 19.68723114294383 27.072752455696957 30.856610465033768 22.383405936325442 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 109.0 1 216.5 2 324.0 3 986.0 4 1648.0 5 1648.0 6 2869.0 7 4090.0 8 4362.5 9 4635.0 10 7044.5 11 9454.0 12 9454.0 13 16514.5 14 23575.0 15 36803.5 16 50032.0 17 50199.5 18 50367.0 19 50367.0 20 55463.0 21 60559.0 22 53426.0 23 46293.0 24 52420.5 25 58548.0 26 58548.0 27 65566.0 28 72584.0 29 78942.0 30 85300.0 31 92774.5 32 100249.0 33 100249.0 34 107852.0 35 115455.0 36 125532.0 37 135609.0 38 141418.5 39 147228.0 40 147228.0 41 150660.0 42 154092.0 43 164468.0 44 174844.0 45 203667.5 46 232491.0 47 232491.0 48 233821.0 49 235151.0 50 216749.0 51 198347.0 52 187397.5 53 176448.0 54 176448.0 55 153473.0 56 130498.0 57 111249.5 58 92001.0 59 81005.5 60 70010.0 61 70010.0 62 61151.0 63 52292.0 64 45494.5 65 38697.0 66 32866.0 67 27035.0 68 27035.0 69 23398.0 70 19761.0 71 17040.5 72 14320.0 73 11984.0 74 9648.0 75 9648.0 76 7537.0 77 5426.0 78 4470.5 79 3515.0 80 2886.0 81 2257.0 82 2257.0 83 2004.5 84 1752.0 85 1428.5 86 1105.0 87 920.5 88 736.0 89 736.0 90 619.0 91 502.0 92 288.5 93 75.0 94 51.0 95 27.0 96 27.0 97 16.5 98 6.0 99 6.0 100 6.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 2607101.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 48.57026299284425 #Duplication Level Percentage of deduplicated Percentage of total 1 75.45313758890657 36.64778736328454 2 13.724473882051866 13.332026117793625 3 4.86003308420085 7.081592551606778 4 2.116176099020826 4.11132918674451 5 1.0710769824217679 2.6011245360903636 6 0.6197464621659863 1.8060749193772048 7 0.39653167563009584 1.3481753439242876 8 0.2605738704196541 1.0124913132276734 9 0.1840997040988537 0.8047593940487519 >10 1.1095697206455633 10.28581720523033 >50 0.11683564472916358 3.932334912702648 >100 0.07837471804468624 7.307523416573411 >500 0.004447049060934778 1.4888567164651858 >1k 0.00420881428981253 3.9013978101715896 >5k 3.9705795186910657E-4 1.317758340924492 >10k+ 3.1764636149528525E-4 3.0209508718345965 >>END_MODULE >>Overrepresented sequences warn #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23242 0.8914882852639772 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22267 0.8540904245750356 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 20476 0.7853934312479647 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 12338 0.4732459540309332 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8408 0.32250380786935373 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 7035 0.2698399486632854 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 6640 0.25468902048673986 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 6179 0.23700654481740446 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 5903 0.2264200734839195 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4853 0.18614545428044407 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 4711 0.18069879149292645 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 4622 0.17728503805567947 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 4165 0.15975598950711922 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3953 0.15162435210603653 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 3743 0.14356942826534147 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3453 0.1324459620091435 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2887 0.11073602441946054 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 2798 0.10732227098221357 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2752 0.10555785909329941 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 3.8356780193786126E-5 0.0 5 7.671356038757225E-5 0.0 0.0 3.8356780193786126E-5 0.0 6 7.671356038757225E-5 0.0 0.0 3.8356780193786126E-5 0.0 7 7.671356038757225E-5 0.0 0.0 3.8356780193786126E-5 0.0 8 1.1507034058135837E-4 0.0 0.0 3.8356780193786126E-5 0.0 9 1.1507034058135837E-4 0.0 0.0 1.1507034058135837E-4 0.0 10 1.1507034058135837E-4 0.0 0.0 2.684974613565029E-4 0.0 11 1.1507034058135837E-4 0.0 0.0 5.753517029067919E-4 0.0 12 1.534271207751445E-4 0.0 0.0 0.0011507034058135838 0.0 13 1.534271207751445E-4 0.0 0.0 0.0011507034058135838 0.0 14 1.534271207751445E-4 0.0 0.0 0.0013424873067825144 0.0 15 1.534271207751445E-4 0.0 0.0 0.002071266130464451 0.0 16 1.534271207751445E-4 0.0 0.0 0.003413753437246965 0.0 17 1.534271207751445E-4 0.0 0.0 0.004871311084610838 0.0 18 1.534271207751445E-4 0.0 0.0 0.00544666278751763 0.0 19 1.534271207751445E-4 0.0 0.0 0.005906944149843063 0.0 20 1.534271207751445E-4 0.0 0.0 0.007632999258563439 0.0 21 1.534271207751445E-4 0.0 0.0 0.010816612014647687 0.0 22 1.534271207751445E-4 0.0 0.0 0.019868812140381213 0.0 23 1.534271207751445E-4 0.0 0.0 0.034252604713051006 0.0 24 1.534271207751445E-4 0.0 0.0 0.05266385920606835 0.0 25 1.534271207751445E-4 0.0 0.0 0.05868587369649277 0.0 26 1.534271207751445E-4 0.0 0.0 0.0666257271966065 0.0 27 1.534271207751445E-4 0.0 0.0 0.12366225934476646 0.0 28 1.534271207751445E-4 0.0 0.0 0.1838056906886231 0.0 29 1.534271207751445E-4 0.0 0.0 0.25676028661720435 0.0 30 1.534271207751445E-4 0.0 0.0 0.3890144647253789 0.0 31 1.9178390096893062E-4 0.0 0.0 0.6085303177744169 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 5595 0.0 28.039322 1 ATTGGAC 1055 0.0 19.113743 3 CAATGCG 100 2.8784052E-7 18.499998 19 GTATTGG 1105 0.0 17.411764 1 CGACGAG 130 1.3953468E-8 17.076923 24 TTGGACC 1585 0.0 16.574133 4 TGGACCC 1495 0.0 16.086956 5 GTATCAA 9820 0.0 16.032078 2 GGACCCT 1490 0.0 15.892617 6 ACCGTTA 140 3.4784534E-8 15.857143 8 GAACCGT 95 7.065166E-5 15.578948 6 TATTGGA 1440 0.0 14.902778 2 GTCCGAC 75 0.0041062613 14.800001 30 TAGCGAG 100 1.09420915E-4 14.799999 28 ACCGTCC 115 2.21186E-5 14.478261 8 GACCCTC 1650 0.0 14.015152 7 CCGGTAG 160 1.7859384E-7 13.875 9 CGGTGTC 150 1.3072022E-6 13.566668 30 CCGTTTA 150 1.3072022E-6 13.566668 27 TGCGACG 125 4.84899E-5 13.32 22 >>END_MODULE