##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088199_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 984567 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 30.819879195626097 31.0 31.0 33.0 28.0 34.0 2 30.952052018806235 31.0 31.0 34.0 28.0 34.0 3 31.00179672891738 31.0 31.0 34.0 27.0 34.0 4 34.98031723590167 35.0 35.0 37.0 32.0 37.0 5 34.85692187530153 35.0 35.0 37.0 32.0 37.0 6 34.93113114699152 35.0 35.0 37.0 32.0 37.0 7 34.74893024040009 35.0 35.0 37.0 31.0 37.0 8 34.83691409523171 35.0 35.0 37.0 32.0 37.0 9 36.24820250932643 38.0 35.0 39.0 32.0 39.0 10 36.102855366877016 38.0 35.0 39.0 31.0 39.0 11 36.14491344926247 38.0 35.0 39.0 31.0 39.0 12 35.96456716505835 38.0 35.0 39.0 30.0 39.0 13 36.01676168305458 38.0 35.0 39.0 30.0 39.0 14 36.82948544893339 38.0 36.0 40.0 31.0 41.0 15 36.89156349948759 38.0 36.0 40.0 31.0 41.0 16 36.83644993179743 38.0 36.0 40.0 31.0 41.0 17 36.99076040533554 38.0 36.0 40.0 31.0 41.0 18 37.016946535888366 38.0 36.0 40.0 31.0 41.0 19 37.134994368082616 39.0 36.0 40.0 31.0 41.0 20 37.0997138843776 39.0 36.0 40.0 31.0 41.0 21 36.97756475689313 39.0 36.0 40.0 31.0 41.0 22 36.9339344097456 39.0 36.0 40.0 31.0 41.0 23 36.79586864073242 39.0 35.0 40.0 31.0 41.0 24 36.69869089660734 38.0 35.0 40.0 30.0 41.0 25 36.61207820290544 38.0 35.0 40.0 30.0 41.0 26 36.315390420357375 38.0 35.0 40.0 30.0 41.0 27 36.12583602741103 38.0 35.0 40.0 30.0 41.0 28 35.95209366147758 38.0 34.0 40.0 29.0 41.0 29 35.78919565656781 38.0 34.0 40.0 29.0 41.0 30 35.57940698804652 38.0 34.0 40.0 28.0 41.0 31 35.26388452995073 37.0 34.0 40.0 27.0 41.0 32 34.98167417758263 37.0 33.0 40.0 26.0 41.0 33 35.09735142453485 37.0 33.0 40.0 27.0 41.0 34 35.03734027242432 37.0 33.0 40.0 26.0 41.0 35 34.90968720259769 37.0 33.0 40.0 25.0 41.0 36 34.801567592657484 37.0 33.0 40.0 25.0 41.0 37 34.6433934917583 37.0 33.0 40.0 24.0 41.0 38 34.485202124385644 37.0 33.0 40.0 24.0 41.0 39 34.36879054447285 37.0 33.0 40.0 23.0 41.0 40 34.161740135511344 37.0 33.0 40.0 22.0 41.0 41 33.978833334856844 37.0 33.0 40.0 21.0 41.0 42 33.703555979430554 37.0 33.0 40.0 19.0 41.0 43 33.36629909391641 37.0 32.0 40.0 18.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 14 1.0 15 8.0 16 13.0 17 47.0 18 101.0 19 250.0 20 507.0 21 1045.0 22 1887.0 23 3091.0 24 4998.0 25 7719.0 26 11409.0 27 16195.0 28 22062.0 29 29392.0 30 36432.0 31 43777.0 32 52379.0 33 63064.0 34 74254.0 35 87791.0 36 109177.0 37 138771.0 38 161322.0 39 118875.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.292026850381944 24.000601279547254 14.810977820706972 20.89639404936383 2 18.074036606955136 24.062862151585417 36.1224782061556 21.740623035303845 3 20.822859185814675 26.459448671344866 32.820417503328876 19.897274639511583 4 13.278832217614445 16.242774742602588 34.641827321045696 35.836565718737276 5 10.434129927165953 41.74840310512134 34.359368128324434 13.45809883938828 6 31.38486258426293 35.987393443005914 14.924428708254492 17.703315264476668 7 23.28069090270139 36.8065352586467 21.0245722231194 18.888201615532513 8 27.924661297809088 33.93207369330884 20.207969594755866 17.93529541412621 9 24.756263413256793 13.572463834355611 24.826852819564333 36.844419932823264 10 16.628426506271285 28.23393430817811 33.23755518923547 21.900083996315132 11 30.566025471095415 21.67856529824786 25.70856020971656 22.046849020940172 12 19.93292482888417 28.13622638174954 32.1046713936177 19.826177395748587 13 31.656961892893015 20.936005370888928 29.99775535844691 17.409277377771144 14 20.501601211497032 22.877975800529573 29.40378867055264 27.216634317420755 15 22.754165028890874 28.975580128117233 28.35124476038705 19.919010082604842 16 20.733073523691125 28.89656062004922 28.23616879298209 22.134197063277565 17 18.300430544594732 27.24791710467647 28.92652302992077 25.52512932080803 18 19.52299843484496 26.13209664756182 34.324632046371654 20.02027287122156 19 18.491986832790456 24.357712578219665 36.20393533400977 20.94636525498011 20 24.080027057579624 23.026670607485322 34.75995031318336 18.133352021751694 21 23.456097959813807 24.012586243495875 33.00557503958593 19.525740757104394 22 21.274834521165143 23.593214072785294 34.10788702038561 21.02406438566395 23 19.988177544037125 26.367530091908424 35.43730391126251 18.20698845279194 24 18.483759866012168 25.03496460880773 33.51341249503589 22.967863030144215 25 19.67819356123047 26.35808431523705 34.82363313009678 19.140088993435693 26 21.717871917299686 24.88373061457473 33.15041028188026 20.247987186245325 27 19.982896034500445 26.77999567322488 32.68594214512572 20.55116614714895 28 19.653411093404515 26.171606401595827 32.83707457186763 21.337907933132026 29 18.582077197387278 25.8887409389102 33.99575651022226 21.53342535348026 30 17.69833845741326 26.142354964161914 36.429516731720646 19.729789846704186 31 19.505325691395303 25.428233934308174 34.94277179714535 20.123668577151175 32 20.870697474118064 25.9039760625737 32.39271679834892 20.832609664959318 33 22.061677874639308 25.816424885254126 31.66041518759008 20.461482052516487 34 19.81165324452272 29.415773634501257 31.84059591678372 18.9319772041923 35 18.08957643309191 30.327951271980474 31.963086311038253 19.619385983889366 36 19.236374974989005 25.772243026629983 34.805147846718405 20.18623415166261 37 19.343731813071127 26.38225737811647 33.48101246537818 20.79299834343422 38 19.991529271243095 25.56433437236877 34.18558615106945 20.258550205318684 39 21.114053182769684 25.15847067797316 33.940503795069304 19.786972344187852 40 19.017801734163342 26.242703645358823 32.65425308790565 22.085241532572187 41 20.140427213181024 25.757617307913023 32.461376422325756 21.640579056580204 42 17.254386953858905 27.723456097959815 32.95072859439733 22.071428353783947 43 18.131828509385343 27.670641002593015 32.228075895292044 21.969454592729594 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 81.0 1 102.0 2 123.0 3 378.0 4 633.0 5 633.0 6 1238.0 7 1843.0 8 2083.0 9 2323.0 10 3650.0 11 4977.0 12 4977.0 13 9345.5 14 13714.0 15 23418.5 16 33123.0 17 32253.5 18 31384.0 19 31384.0 20 33507.5 21 35631.0 22 27880.0 23 20129.0 24 21334.0 25 22539.0 26 22539.0 27 23980.0 28 25421.0 29 26041.5 30 26662.0 31 27891.0 32 29120.0 33 29120.0 34 31144.5 35 33169.0 36 35955.0 37 38741.0 38 40669.0 39 42597.0 40 42597.0 41 44698.5 42 46800.0 43 54851.0 44 62902.0 45 83983.0 46 105064.0 47 105064.0 48 107171.0 49 109278.0 50 97188.5 51 85099.0 52 78199.5 53 71300.0 54 71300.0 55 59734.5 56 48169.0 57 38170.5 58 28172.0 59 24023.0 60 19874.0 61 19874.0 62 17164.5 63 14455.0 64 12558.5 65 10662.0 66 9020.0 67 7378.0 68 7378.0 69 6179.5 70 4981.0 71 4232.0 72 3483.0 73 2830.5 74 2178.0 75 2178.0 76 1661.0 77 1144.0 78 914.5 79 685.0 80 523.5 81 362.0 82 362.0 83 273.0 84 184.0 85 136.0 86 88.0 87 69.5 88 51.0 89 51.0 90 45.5 91 40.0 92 22.0 93 4.0 94 4.0 95 4.0 96 4.0 97 2.0 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 984567.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 47.91991481728986 #Duplication Level Percentage of deduplicated Percentage of total 1 81.00245423606391 38.81630706983603 2 10.99090612722162 10.533665707625786 3 3.269684544274122 4.700490145230754 4 1.370727333372723 2.627405482118071 5 0.7701046971129325 1.8451675743023266 6 0.4736835088429872 1.361932403646655 7 0.30640044709924497 1.0277878327482743 8 0.24200894752711868 0.9277638520417198 9 0.1796472780978316 0.7747814037245465 >10 1.209849722410583 11.082975876788348 >50 0.1004810010665633 3.2667503366355968 >100 0.06613240773238326 6.173020919076527 >500 0.009599865631028937 3.4275932484406275 >1k 0.0072532318101107525 7.309384260095836 >5k 4.2666069471239713E-4 1.3217022013507373 >10k+ 6.399910420685958E-4 4.803271686338135 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 17191 1.7460467393280499 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 16079 1.6331036892359787 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 13716 1.3930997077903282 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 7748 0.7869449209652568 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 5181 0.5262211713372478 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4801 0.4876255247230508 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 4634 0.4706637537110222 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 4500 0.45705370990496325 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 4489 0.4559364675029734 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 3705 0.3763075544884198 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3302 0.33537585557915306 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3262 0.3313131559355534 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3233 0.3283676986939436 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 2764 0.28073254537273745 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 2309 0.23451933692679117 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2286 0.23218328463172136 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2251 0.22862842244357165 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2049 0.20811178924339327 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2031 0.20628357440377346 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 1792 0.18200894403326537 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1688 0.17144592495990624 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 1611 0.16362522814597685 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1576 0.16007036595782714 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1557 0.1581405836271173 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 1538 0.15621080129640744 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1387 0.1408741101418187 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1269 0.12888914619319963 No Hit CATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAAC 1258 0.12777190379120973 No Hit CGCATGTGCGTTGCTGCATTTTACTCTTCTCCCCTCGGCAGCA 1252 0.1271624988446698 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1205 0.12238882676344016 No Hit GGGGAGAAGAGTAAAATGCAGCAACGCACATGCGAGGGTCCAA 1179 0.11974807199510039 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTC 1104 0.11213051016335099 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 1102 0.11192737518117102 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAC 1087 0.11040386281482113 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTCTGTCTC 1081 0.10979445786828118 No Hit GTATTGGACCCTCGCATGTGCGTTGCTGCATTTTACTCTTCTC 1076 0.10928662041283121 No Hit CTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTAC 1049 0.10654429815340144 No Hit TTGCTGCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAAC 1038 0.10542705575141154 No Hit ATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAG 1036 0.10522392076923155 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAAAA 999 0.10146592359890184 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTC 990 0.10055181617909191 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 0.0 0.0 6 0.0 0.0 0.0 0.0 0.0 7 0.0 0.0 0.0 0.0 0.0 8 0.0 0.0 0.0 0.0 0.0 9 0.0 0.0 0.0 0.0 0.0 10 0.0 0.0 0.0 1.0156749108999184E-4 0.0 11 0.0 0.0 0.0 3.047024732699755E-4 0.0 12 0.0 0.0 0.0 0.0010156749108999185 0.0 13 0.0 0.0 0.0 0.0017266473485298614 0.0 14 0.0 0.0 0.0 0.002031349821799837 0.0 15 0.0 0.0 0.0 0.002539187277249796 0.0 16 0.0 0.0 0.0 0.004875239572319608 0.0 17 0.0 0.0 0.0 0.007820696813929372 0.0 18 0.0 0.0 0.0 0.009344209180279249 0.0 19 0.0 0.0 0.0 0.010156749108999184 0.0 20 0.0 0.0 0.0 0.013305341332788932 0.0 21 0.0 0.0 0.0 0.018485283378378514 0.0 22 0.0 0.0 0.0 0.03443137947950724 0.0 23 0.0 0.0 0.0 0.0560652550816755 0.0 24 0.0 0.0 0.0 0.08836371724829291 0.0 25 0.0 0.0 0.0 0.09852046635729209 0.0 26 0.0 0.0 0.0 0.11050543030591113 0.0 27 0.0 0.0 0.0 0.19115001823136465 0.0 28 0.0 0.0 0.0 0.26864601393302845 0.0 29 0.0 0.0 0.0 0.36523669795961067 0.0 30 0.0 0.0 0.0 0.5662387628267045 0.0 31 0.0 0.0 0.0 0.8385412064389727 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position ACGTTTA 35 5.630209E-7 37.0 26 GGTATCA 3825 0.0 30.567322 1 GCCCCGA 105 0.0 26.42857 11 CCGAATT 95 1.0913936E-11 25.31579 14 ATTGGAC 430 0.0 24.093023 3 CGAATTA 100 2.0008883E-11 24.05 15 GTATACG 70 1.9223444E-7 23.785715 1 GTATTGG 415 0.0 23.626507 1 TGCGTCG 40 0.0019309913 23.125002 10 CATTGCG 50 2.701721E-4 22.199999 29 AGCCGTC 60 3.7255886E-5 21.583332 12 TATTGGA 485 0.0 20.979382 2 CTAGATA 45 0.0038254242 20.555555 4 TTGGACC 715 0.0 19.923077 4 TATACGG 65 6.900845E-5 19.923077 2 TATACCG 75 9.26356E-6 19.733334 5 TCACGTT 75 9.26356E-6 19.733334 24 CCCGAAT 135 5.638867E-11 19.185184 13 TACAGAG 205 0.0 18.951221 5 TGGACCC 790 0.0 18.5 5 >>END_MODULE