##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088198_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 3306008 Sequences flagged as poor quality 0 Sequence length 43 %GC 43 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.13112732939545 31.0 31.0 33.0 30.0 34.0 2 31.285127864179398 31.0 31.0 34.0 28.0 34.0 3 31.34457115651263 31.0 31.0 34.0 28.0 34.0 4 35.288326888501174 37.0 35.0 37.0 33.0 37.0 5 35.15114815209159 37.0 35.0 37.0 32.0 37.0 6 35.19559027080394 37.0 35.0 37.0 32.0 37.0 7 35.039577944155006 37.0 35.0 37.0 32.0 37.0 8 35.092271706541545 37.0 35.0 37.0 32.0 37.0 9 36.611500335147404 39.0 35.0 39.0 32.0 39.0 10 36.453710638328765 38.0 35.0 39.0 32.0 39.0 11 36.481937732758055 38.0 35.0 39.0 32.0 39.0 12 36.313504383534465 38.0 35.0 39.0 32.0 39.0 13 36.36997188149575 38.0 35.0 39.0 32.0 39.0 14 37.3214260219576 39.0 36.0 41.0 32.0 41.0 15 37.384437968692154 39.0 36.0 41.0 32.0 41.0 16 37.36314794156578 39.0 36.0 41.0 32.0 41.0 17 37.43474637689927 39.0 36.0 41.0 32.0 41.0 18 37.44033831739064 39.0 36.0 41.0 32.0 41.0 19 37.52915207706696 39.0 36.0 41.0 32.0 41.0 20 37.492958274753114 39.0 36.0 41.0 32.0 41.0 21 37.36685815642309 39.0 36.0 41.0 31.0 41.0 22 37.31944538549211 39.0 36.0 41.0 31.0 41.0 23 37.209416916111515 39.0 36.0 41.0 31.0 41.0 24 37.1270166315387 39.0 36.0 41.0 31.0 41.0 25 37.03867322765099 39.0 36.0 40.0 31.0 41.0 26 36.79532656908271 39.0 35.0 40.0 30.0 41.0 27 36.64302113001541 38.0 35.0 40.0 30.0 41.0 28 36.509643352345186 38.0 35.0 40.0 30.0 41.0 29 36.3792679872523 38.0 35.0 40.0 30.0 41.0 30 36.2143134559868 38.0 35.0 40.0 30.0 41.0 31 35.985464947453245 38.0 35.0 40.0 29.0 41.0 32 35.69410055874033 38.0 34.0 40.0 28.0 41.0 33 35.87253479120438 38.0 34.0 40.0 29.0 41.0 34 35.872214162821145 38.0 35.0 40.0 29.0 41.0 35 35.79877907131501 38.0 35.0 40.0 29.0 41.0 36 35.730781655700774 38.0 35.0 40.0 28.0 41.0 37 35.6089474072658 38.0 34.0 40.0 27.0 41.0 38 35.499072597525476 38.0 34.0 40.0 27.0 41.0 39 35.46514860218124 38.0 34.0 40.0 26.0 41.0 40 35.33533252188138 38.0 34.0 40.0 26.0 41.0 41 35.21846861834575 38.0 34.0 40.0 25.0 41.0 42 35.02909914313577 38.0 34.0 40.0 24.0 41.0 43 34.72818426331697 38.0 33.0 40.0 24.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 11 1.0 12 0.0 13 6.0 14 5.0 15 6.0 16 28.0 17 81.0 18 188.0 19 496.0 20 1057.0 21 2102.0 22 3912.0 23 6837.0 24 11359.0 25 18333.0 26 27697.0 27 40761.0 28 56885.0 29 77898.0 30 100410.0 31 124463.0 32 152455.0 33 187071.0 34 228115.0 35 277492.0 36 347779.0 37 454463.0 38 585856.0 39 600252.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 40.80216986770752 22.48993347868487 13.731212991620104 22.97668366198751 2 17.516715023073147 22.913223440475644 36.65544668978418 22.91461484666704 3 19.695233647347496 26.200208831920552 31.8414232512444 22.26313426948755 4 13.1139731059332 15.932568826209737 35.97925352872709 34.97420453912997 5 11.61264582541845 40.01626735325504 34.97698735151276 13.394099469813744 6 31.656880443120528 36.57066165599115 15.742369649438235 16.030088251450085 7 24.925227041192883 34.59704271737999 22.00164064938742 18.476089592039706 8 27.116661544678657 34.14967537888596 20.446078775368964 18.287584301066424 9 25.374318513445825 13.825556380988793 23.30578147421301 37.49434363135237 10 16.088497063527978 27.577156498108895 34.241508187518 22.09283825084513 11 31.95179805977481 22.05654069802614 24.90284355028784 21.08881769191121 12 20.057483224481004 27.073255721099283 32.0520095535159 20.817251500903808 13 30.65437228222073 21.05639187805958 28.359217521554697 19.93001831816499 14 20.880106763202026 22.415614239287986 28.38117754101018 28.323101456499806 15 22.999218392695965 28.988919567042792 26.619203583294414 21.39265845696683 16 21.883915586411167 28.519955184621455 26.97011017517199 22.626019053795392 17 19.672517428874944 27.282783344746896 28.177911245223846 24.86678798115431 18 20.625812157744324 26.69551918809634 31.800104536952116 20.87856411720722 19 20.176508949766607 25.332697319546714 32.94042240672134 21.55037132396534 20 23.855054192246357 24.45834976805864 31.754248628557463 19.932347411137542 21 23.378376579850986 25.335722115614967 30.55791153560427 20.727989768929778 22 22.015947934790237 24.911161739475524 31.46468490094398 21.60820542479026 23 21.093748109502457 26.51061340444427 32.26186990473102 20.133768581322247 24 20.08891085563011 25.870082589031846 31.01005805188614 23.0309485034519 25 21.04365748661225 26.619506062901237 31.894508422242176 20.442328028244336 26 22.172027411911888 25.782242511209898 30.763597668245207 21.282132408633007 27 21.03899930066715 26.903352925945732 30.489369656697747 21.568278116689374 28 20.825932665619685 26.419234315222468 30.67058518914655 22.0842478300113 29 20.02938286900697 26.462125923470243 31.449893648170242 22.05859755935255 30 19.59583884854483 26.682724300727646 32.88016846904181 20.84126838168571 31 20.82396654817532 26.124104962843404 32.0083012503297 21.04362723865157 32 21.67075820748165 26.24757713834933 30.419920338970748 21.66174431519827 33 22.346830376696005 26.120233223876042 30.068106308272696 21.464830091155253 34 20.923936058230954 28.222436243348476 30.136285211651032 20.717342486769542 35 19.90343036072508 28.982174271810596 30.346327050630244 20.76806831683408 36 20.660143593118953 26.010433126598603 32.004066535834156 21.32535674444829 37 20.78304105737191 26.14412911281521 31.32636097674295 21.746468853069924 38 20.920185311106327 25.780306641726213 31.92133836336754 21.378169683799918 39 21.623117669406728 25.34685336514612 31.96298980522733 21.06703916021982 40 20.172364979153105 25.995127658493267 31.271581919946957 22.560925442406674 41 20.906301497153063 25.56996232314017 31.15310065795364 22.370635521753123 42 18.867135227742946 27.068234559625992 31.522549249729582 22.54208096290148 43 19.460751456136826 26.822106903552562 31.08020307270884 22.63693856760177 >>END_MODULE >>Per sequence GC content warn #GC Content Count 0 278.0 1 396.0 2 514.0 3 1430.5 4 2347.0 5 2347.0 6 4000.0 7 5653.0 8 6039.0 9 6425.0 10 9676.5 11 12928.0 12 12928.0 13 23265.5 14 33603.0 15 53256.0 16 72909.0 17 72628.5 18 72348.0 19 72348.0 20 77939.0 21 83530.0 22 70359.0 23 57188.0 24 63480.0 25 69772.0 26 69772.0 27 77341.0 28 84910.0 29 90549.0 30 96188.0 31 103911.0 32 111634.0 33 111634.0 34 122067.0 35 132500.0 36 142814.5 37 153129.0 38 159633.5 39 166138.0 40 166138.0 41 173716.5 42 181295.0 43 200025.0 44 218755.0 45 265014.5 46 311274.0 47 311274.0 48 312911.5 49 314549.0 50 288901.0 51 263253.0 52 245677.0 53 228101.0 54 228101.0 55 201900.0 56 175699.0 57 149408.0 58 123117.0 59 108840.0 60 94563.0 61 94563.0 62 83818.0 63 73073.0 64 63389.5 65 53706.0 66 45771.5 67 37837.0 68 37837.0 69 32229.5 70 26622.0 71 22323.0 72 18024.0 73 14352.0 74 10680.0 75 10680.0 76 8360.0 77 6040.0 78 4721.0 79 3402.0 80 2659.0 81 1916.0 82 1916.0 83 1424.5 84 933.0 85 745.0 86 557.0 87 461.0 88 365.0 89 365.0 90 280.5 91 196.0 92 117.5 93 39.0 94 27.0 95 15.0 96 15.0 97 9.0 98 3.0 99 1.5 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 3306008.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 43.23782488596435 #Duplication Level Percentage of deduplicated Percentage of total 1 72.60460200366452 31.392650673495837 2 14.061601684838152 12.159861425304266 3 5.390029164709883 6.991594114618999 4 2.6842088954858285 4.6423741672145615 5 1.4347327433282002 3.101736155709198 6 0.8874602010715681 2.3023109260317103 7 0.5578578430454282 1.6884391810202004 8 0.39359971885410533 1.3614716575182884 9 0.28500383171174 1.1090651190642957 >10 1.4699717616191499 11.86027418221399 >50 0.13547995774669946 4.10768298133456 >100 0.08322351058116324 6.74795846681881 >500 0.0059035023040190865 1.7124848710911518 >1k 0.005270984199704876 4.530647579245103 >5k 7.027978932939835E-4 2.337129339266782 >10k+ 3.5139894664699175E-4 3.9543191600523504 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 35176 1.0640022649672958 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 34026 1.0292171101824317 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 30606 0.9257690846483131 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 17893 0.5412267604918076 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 12429 0.375951903322678 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 9573 0.28956372761348426 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 9405 0.2844820702188259 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 9290 0.2810035547403394 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 9052 0.2738045400979066 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 7373 0.22301821411200456 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 7217 0.21829953224553603 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 6796 0.20556514079820737 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 6778 0.20502067750592254 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 5762 0.1742887494525119 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 5665 0.1713546972663103 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 4965 0.15018112478856677 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 4962 0.1500903809065193 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 4166 0.12601300420325662 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 3838 0.11609167309939963 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 3760 0.11373233216616536 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 3556 0.10756174818693724 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 0.0 0.0 0.0 0.0 0.0 3 0.0 0.0 0.0 0.0 0.0 4 0.0 0.0 0.0 0.0 0.0 5 0.0 0.0 0.0 3.0247960682490786E-5 0.0 6 0.0 0.0 0.0 3.0247960682490786E-5 0.0 7 0.0 0.0 0.0 3.0247960682490786E-5 0.0 8 0.0 0.0 0.0 3.0247960682490786E-5 0.0 9 0.0 0.0 0.0 1.2099184272996315E-4 0.0 10 0.0 0.0 0.0 1.5123980341245392E-4 0.0 11 0.0 0.0 0.0 4.23471449554871E-4 0.0 12 0.0 3.0247960682490786E-5 0.0 8.46942899109742E-4 0.0 13 0.0 3.0247960682490786E-5 0.0 9.98182702522196E-4 0.0 14 0.0 6.049592136498157E-5 0.0 0.001119174545252159 0.0 15 0.0 6.049592136498157E-5 0.0 0.0017241337589019748 0.0 16 0.0 6.049592136498157E-5 0.0 0.0027525644221066616 0.0 17 0.0 6.049592136498157E-5 0.0 0.004567442063056109 0.0 18 0.0 6.049592136498157E-5 0.0 0.005293393119435888 0.0 19 0.0 6.049592136498157E-5 0.0 0.006019344175815666 0.0 20 0.0 6.049592136498157E-5 0.0 0.007561990170622697 0.0 21 0.0 6.049592136498157E-5 0.0 0.010556538278189285 0.0 22 0.0 6.049592136498157E-5 0.0 0.017483321274479675 0.0 23 3.0247960682490786E-5 6.049592136498157E-5 0.0 0.030278208643173276 0.0 24 3.0247960682490786E-5 6.049592136498157E-5 0.0 0.045916404316021016 0.0 25 3.0247960682490786E-5 6.049592136498157E-5 0.0 0.05260120362685148 0.0 26 3.0247960682490786E-5 6.049592136498157E-5 0.0 0.06125212038204384 0.0 27 3.0247960682490786E-5 6.049592136498157E-5 0.0 0.1339682178627517 0.0 28 6.049592136498157E-5 6.049592136498157E-5 0.0 0.2127641554406402 0.0 29 6.049592136498157E-5 6.049592136498157E-5 0.0 0.30453646815131724 0.0 30 9.074388204747236E-5 6.049592136498157E-5 0.0 0.48073083912682607 0.0 31 9.074388204747236E-5 6.049592136498157E-5 0.0 0.7489697544591544 0.0 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 7950 0.0 29.08805 1 GTATTGG 1060 0.0 22.863209 1 ATTGGAC 1140 0.0 20.122808 3 TTGGACC 1720 0.0 18.5 4 ACGTTTA 180 0.0 18.5 26 GGACCCT 1775 0.0 18.030985 6 TGGACCC 1865 0.0 16.664879 5 GTATCAA 13920 0.0 16.652657 2 TATACCG 290 0.0 16.586206 5 GACCCTC 1890 0.0 15.759259 7 CGCCGTT 95 7.066084E-5 15.578948 25 ATCACGT 215 0.0 15.488372 23 CGTCTGT 835 0.0 15.287425 34 TATTGGA 1490 0.0 15.2718115 2 TCACGTT 245 0.0 14.346938 24 CGTCGAG 130 4.44975E-6 14.230769 10 TGACGTA 105 1.6571152E-4 14.095238 20 ACCGTTA 105 1.6571152E-4 14.095238 8 CGCCGGA 250 0.0 14.059999 14 GCGTTAT 185 4.9076334E-9 14.0 1 >>END_MODULE