##FastQC 0.11.5 >>Basic Statistics pass #Measure Value Filename SRR2088197_1.fastq File type Conventional base calls Encoding Sanger / Illumina 1.9 Total Sequences 1634901 Sequences flagged as poor quality 0 Sequence length 43 %GC 42 >>END_MODULE >>Per base sequence quality pass #Base Mean Median Lower Quartile Upper Quartile 10th Percentile 90th Percentile 1 31.108180862327444 31.0 31.0 33.0 30.0 34.0 2 31.27118339275589 31.0 31.0 34.0 28.0 34.0 3 31.308007029171797 31.0 31.0 34.0 28.0 34.0 4 35.260961367079716 37.0 35.0 37.0 33.0 37.0 5 35.121294806229855 37.0 35.0 37.0 32.0 37.0 6 35.177422975458455 37.0 35.0 37.0 32.0 37.0 7 35.01551164260099 37.0 35.0 37.0 32.0 37.0 8 35.07514583451842 37.0 35.0 37.0 32.0 37.0 9 36.55182974381935 39.0 35.0 39.0 32.0 39.0 10 36.4195691359905 38.0 35.0 39.0 32.0 39.0 11 36.45884429699413 38.0 35.0 39.0 32.0 39.0 12 36.299172855114776 38.0 35.0 39.0 32.0 39.0 13 36.361230435359694 38.0 35.0 39.0 32.0 39.0 14 37.27916675076962 39.0 36.0 41.0 32.0 41.0 15 37.34934959364512 39.0 36.0 41.0 32.0 41.0 16 37.31184334708952 39.0 36.0 41.0 32.0 41.0 17 37.414727864256 39.0 36.0 41.0 32.0 41.0 18 37.440429114668106 39.0 36.0 41.0 32.0 41.0 19 37.538795927092835 39.0 36.0 41.0 32.0 41.0 20 37.50396813018036 39.0 36.0 41.0 32.0 41.0 21 37.38822044882228 39.0 36.0 41.0 32.0 41.0 22 37.3475396981224 39.0 36.0 41.0 32.0 41.0 23 37.23805845124567 39.0 36.0 41.0 31.0 41.0 24 37.146558109634775 39.0 36.0 41.0 31.0 41.0 25 37.05547981192745 39.0 36.0 40.0 31.0 41.0 26 36.78826730181216 39.0 35.0 40.0 31.0 41.0 27 36.61955800381797 38.0 35.0 40.0 30.0 41.0 28 36.461481153904735 38.0 35.0 40.0 30.0 41.0 29 36.31176688986061 38.0 35.0 40.0 30.0 41.0 30 36.12052228238896 38.0 35.0 40.0 30.0 41.0 31 35.843307943416754 38.0 34.0 40.0 29.0 41.0 32 35.537239257912255 38.0 34.0 40.0 28.0 41.0 33 35.65306217318358 38.0 34.0 40.0 29.0 41.0 34 35.608050885038296 38.0 34.0 40.0 28.0 41.0 35 35.5072747524162 38.0 34.0 40.0 27.0 41.0 36 35.412981581147726 38.0 34.0 40.0 27.0 41.0 37 35.251004800902315 38.0 34.0 40.0 26.0 41.0 38 35.111119878206694 38.0 34.0 40.0 25.0 41.0 39 35.00902990456303 38.0 34.0 40.0 25.0 41.0 40 34.81720116386252 38.0 33.0 40.0 24.0 41.0 41 34.648316320070755 38.0 33.0 40.0 23.0 41.0 42 34.405020854473754 38.0 33.0 40.0 22.0 41.0 43 34.06839557869253 38.0 33.0 40.0 20.0 41.0 >>END_MODULE >>Per sequence quality scores pass #Quality Count 13 2.0 14 1.0 15 3.0 16 19.0 17 28.0 18 123.0 19 287.0 20 595.0 21 1143.0 22 2204.0 23 3788.0 24 6100.0 25 9760.0 26 15002.0 27 21895.0 28 30252.0 29 41022.0 30 52356.0 31 63511.0 32 78193.0 33 95151.0 34 116409.0 35 138703.0 36 173613.0 37 226530.0 38 275437.0 39 282774.0 >>END_MODULE >>Per base sequence content fail #Base G A T C 1 39.921010507669884 23.386492515448946 14.728353582265838 21.96414339461533 2 17.315849705884332 23.54362741230203 36.1876346029515 22.952888278862147 3 19.97240199865313 25.790246626554147 32.843273078920376 21.394078295872347 4 13.366497420944754 16.290772346460123 35.09460205847327 35.24812817412186 5 11.124037479945269 40.86204608107769 34.513098958285546 13.50081748069149 6 31.35039981014141 35.872508488281554 15.562287869418393 17.214803832158644 7 23.852942777574913 36.131423248257846 21.588585486215987 18.427048487951257 8 27.381474474601212 33.864802822923224 20.493167476195808 18.260555226279756 9 25.011973202047095 14.092902261360168 24.841259501339835 36.0538650352529 10 16.47524834837094 28.665160765086085 34.01484248893358 20.844748397609397 11 30.701308519598435 22.41279441385136 25.211312489257757 21.674584577292446 12 19.77398019818937 28.51885221184647 31.70136907372373 20.005798516240432 13 30.372114274809302 21.781991692463336 29.387467498031988 18.458426534695374 14 20.561856650647346 23.586810455189642 29.366426468636327 26.484906425526685 15 22.813430293332747 29.551881123077177 27.386673566167 20.248015017423075 16 21.287955662147127 28.625280674487325 28.332847065357473 21.753916598008075 17 18.709573240214546 28.045857210925924 28.919059930845965 24.32550961801357 18 19.49029329604667 27.121458730528637 33.463983446092456 19.924264527332237 19 18.978152193924892 25.948176678587874 35.0229157606485 20.050755366838725 20 22.94499789283877 24.8718423929033 33.74406156703066 18.439098147227263 21 22.415302210959563 25.62442618849704 32.34850305920665 19.611768541336755 22 20.63990418991731 25.643876907531403 33.1127083535945 20.603510548956788 23 19.922490719621557 27.545215276032003 33.84963370870774 18.682660295638694 24 18.65226090142461 26.759479625983467 32.52612849340725 22.062130979184673 25 19.60877141796353 27.682838288067597 33.64870411113578 19.059686182833087 26 20.933010622661556 26.662715357076667 32.36379450498838 20.0404795152734 27 19.667490569765388 27.890373790217264 31.875691555635477 20.566444084381867 28 19.450719034363548 27.691095668789735 32.0563141132093 20.80187118363742 29 18.698808062384206 27.399457214840535 32.892695031686934 21.00903969108833 30 18.029715560758724 27.525336396515755 35.08603884883549 19.358909193890028 31 19.57243894278614 26.81581331224337 33.76932303546209 19.842424709508403 32 20.27278715958948 27.430345935319632 31.766999959018925 20.529866946071966 33 21.177612589386147 27.368935489060192 31.247029636656897 20.20642228489676 34 19.714710554339376 29.606318670060144 31.299509878579805 19.379460897020675 35 18.1961476566471 30.37015696974924 31.59402312433597 19.839672249267693 36 19.29450162425737 27.039129586439792 33.494811000788424 20.17155778851441 37 19.15094553125847 27.129899608600155 32.92205460758786 20.79710025255352 38 19.502954613153946 26.815690980677115 33.38251062296738 20.29884378320155 39 20.53983696872165 26.217611953262004 33.247211910690616 19.995339167325728 40 18.884140385258803 26.772079777307617 32.65690093773262 21.68687889970096 41 19.583265286399605 26.287402111809826 32.453280045703075 21.676052556087495 42 17.182324801318245 27.881565917446988 32.802720164707225 22.133389116527542 43 17.723336153075937 27.565277652897635 32.58704961340167 22.12433658062476 >>END_MODULE >>Per sequence GC content fail #GC Content Count 0 222.0 1 301.0 2 380.0 3 1031.0 4 1682.0 5 1682.0 6 2677.5 7 3673.0 8 4086.5 9 4500.0 10 6743.5 11 8987.0 12 8987.0 13 16140.5 14 23294.0 15 36434.0 16 49574.0 17 48078.5 18 46583.0 19 46583.0 20 51007.0 21 55431.0 22 45083.5 23 34736.0 24 37895.5 25 41055.0 26 41055.0 27 44354.5 28 47654.0 29 49398.5 30 51143.0 31 53662.0 32 56181.0 33 56181.0 34 60296.5 35 64412.0 36 69314.5 37 74217.0 38 75854.0 39 77491.0 40 77491.0 41 81194.5 42 84898.0 43 95139.0 44 105380.0 45 131791.0 46 158202.0 47 158202.0 48 160000.0 49 161798.0 50 146444.0 51 131090.0 52 119157.5 53 107225.0 54 107225.0 55 93213.5 56 79202.0 57 64112.5 58 49023.0 59 42728.5 60 36434.0 61 36434.0 62 31511.5 63 26589.0 64 22835.0 65 19081.0 66 15834.0 67 12587.0 68 12587.0 69 10701.0 70 8815.0 71 7173.0 72 5531.0 73 4475.0 74 3419.0 75 3419.0 76 2745.0 77 2071.0 78 1594.0 79 1117.0 80 916.5 81 716.0 82 716.0 83 517.0 84 318.0 85 213.5 86 109.0 87 84.0 88 59.0 89 59.0 90 38.5 91 18.0 92 9.5 93 1.0 94 2.0 95 3.0 96 3.0 97 1.5 98 0.0 99 0.0 100 0.0 >>END_MODULE >>Per base N content pass #Base N-Count 1 0.0 2 0.0 3 0.0 4 0.0 5 0.0 6 0.0 7 0.0 8 0.0 9 0.0 10 0.0 11 0.0 12 0.0 13 0.0 14 0.0 15 0.0 16 0.0 17 0.0 18 0.0 19 0.0 20 0.0 21 0.0 22 0.0 23 0.0 24 0.0 25 0.0 26 0.0 27 0.0 28 0.0 29 0.0 30 0.0 31 0.0 32 0.0 33 0.0 34 0.0 35 0.0 36 0.0 37 0.0 38 0.0 39 0.0 40 0.0 41 0.0 42 0.0 43 0.0 >>END_MODULE >>Sequence Length Distribution pass #Length Count 43 1634901.0 >>END_MODULE >>Sequence Duplication Levels fail #Total Deduplicated Percentage 37.92642109154002 #Duplication Level Percentage of deduplicated Percentage of total 1 69.24370104256494 26.261657636770263 2 14.260599775915153 10.817070242385588 3 6.079177934811484 6.916843867381769 4 3.1520558931946505 4.781847964374824 5 1.9193342671978526 3.6396739816584076 6 1.2498465326054862 2.8441323537238126 7 0.8393083174698656 2.2282372471795853 8 0.5808007104636437 1.7622153852247815 9 0.40330294987464393 1.3766253753965405 >10 2.014948798293258 13.537348863764567 >50 0.14547580854371858 3.84414120945374 >100 0.09065307769708114 6.8947044733903216 >500 0.010397445684171756 2.7221022233811674 >1k 0.009097764973650287 6.363627914411983 >5k 8.123004440759184E-4 2.02942305012575 >10k+ 4.87380266445551E-4 3.9803482113769757 >>END_MODULE >>Overrepresented sequences fail #Sequence Count Percentage Possible Source GGTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTT 23593 1.4430843213136453 No Hit TATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTT 22441 1.3726213391514226 No Hit GTATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTT 18566 1.1356039295345712 No Hit GTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCGAG 8412 0.5145265676637302 No Hit ACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 8168 0.4996021165807593 No Hit ACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAAT 6163 0.37696472141126586 No Hit ATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAA 5184 0.317083419730002 No Hit GGTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACT 5010 0.3064405734659163 No Hit ATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 4521 0.27653050551684777 No Hit TATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTA 4058 0.2482107479290795 No Hit CGCTCGAACATTCCTAAGTCTGAATCGTGTAGCAAGCCCATGT 3946 0.2413601802188634 No Hit GAGTACATGGGCTTGCTACACGATTCAGACTTAGGAATGTTCG 3783 0.23139015756917392 No Hit GTATCAACGCAGAGTACATGGGCTTGCTACACGATTCAGACTT 3580 0.21897350359440723 No Hit CGGCAGCAACGCTCGAACATTCCTAAGTCTGAATCGTGTAGCA 3460 0.2116336096191757 No Hit CTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGTCTGAA 3292 0.20135775805385156 No Hit TTCCTAAGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTT 2958 0.18092838648945717 No Hit ATCAACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2910 0.17799242889936454 No Hit GAGTAAAATGCAGCAACGCACATGCGAGGGTCCAAAAAAAAAA 2900 0.17738077106809524 No Hit AACGCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 2811 0.17193701636979852 No Hit GACTTAGGAATGTTCGAGCGTTGCTGCCGAGGGGAGAAGAGTA 2686 0.16429129347893237 No Hit TTTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTA 2285 0.13976381444503366 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTTGATACC 2084 0.12746949203652086 No Hit CTACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAG 2027 0.12398304239828589 No Hit AACGCAGAGTACATGGGCTTGCTACACGATTCAGACTTAGGAA 1970 0.12049659276005091 No Hit GCAGAGTACTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTT 1926 0.11780529830246601 No Hit TTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCCTAAGT 1841 0.11260620673667703 No Hit AGTCTGAATCGTGTAGCAAGCCCATGTACTCTGCGTCTGTCTC 1834 0.11217804625478851 No Hit ACACGATTCAGACTTAGGAATGTTCGAGCGTTGCTGCCGAGGG 1741 0.10648962842398407 No Hit ACGCACATGCGAGGGTCCAAAAAAAAAAAAAAAAAAAAAAAAA 1672 0.10226918938822595 No Hit GCATTTTACTCTTCTCCCCTCGGCAGCAACGCTCGAACATTCC 1644 0.10055654746067193 No Hit >>END_MODULE >>Adapter Content pass #Position Illumina Universal Adapter Illumina Small RNA 3' Adapter Illumina Small RNA 5' Adapter Nextera Transposase Sequence SOLID Small RNA Adapter 1 0.0 0.0 0.0 0.0 0.0 2 6.11657831269294E-5 6.11657831269294E-5 0.0 0.0 0.0 3 6.11657831269294E-5 6.11657831269294E-5 0.0 0.0 0.0 4 6.11657831269294E-5 6.11657831269294E-5 0.0 0.0 0.0 5 6.11657831269294E-5 6.11657831269294E-5 0.0 0.0 0.0 6 1.223315662538588E-4 6.11657831269294E-5 6.11657831269294E-5 0.0 0.0 7 1.223315662538588E-4 6.11657831269294E-5 6.11657831269294E-5 0.0 0.0 8 1.223315662538588E-4 6.11657831269294E-5 6.11657831269294E-5 0.0 0.0 9 1.223315662538588E-4 6.11657831269294E-5 6.11657831269294E-5 0.0 0.0 10 1.223315662538588E-4 6.11657831269294E-5 6.11657831269294E-5 6.11657831269294E-5 0.0 11 1.223315662538588E-4 6.11657831269294E-5 6.11657831269294E-5 1.223315662538588E-4 0.0 12 1.223315662538588E-4 6.11657831269294E-5 6.11657831269294E-5 1.8349734938078818E-4 0.0 13 1.223315662538588E-4 6.11657831269294E-5 1.8349734938078818E-4 1.8349734938078818E-4 0.0 14 1.8349734938078818E-4 6.11657831269294E-5 1.8349734938078818E-4 2.446631325077176E-4 0.0 15 1.8349734938078818E-4 6.11657831269294E-5 1.8349734938078818E-4 4.281604818885058E-4 0.0 16 1.8349734938078818E-4 6.11657831269294E-5 1.8349734938078818E-4 8.563209637770116E-4 0.0 17 1.8349734938078818E-4 6.11657831269294E-5 2.446631325077176E-4 0.001406813011919376 0.0 18 1.8349734938078818E-4 6.11657831269294E-5 4.281604818885058E-4 0.0017126419275540232 0.0 19 1.8349734938078818E-4 6.11657831269294E-5 4.281604818885058E-4 0.0020796366263155994 0.0 20 1.8349734938078818E-4 6.11657831269294E-5 4.893262650154352E-4 0.002813626023838752 0.0 21 1.8349734938078818E-4 6.11657831269294E-5 6.728236143962234E-4 0.003853444336996552 0.0 22 1.8349734938078818E-4 6.11657831269294E-5 7.339893975231527E-4 0.006850567710216093 6.11657831269294E-5 23 1.8349734938078818E-4 6.11657831269294E-5 7.339893975231527E-4 0.011560333010989656 6.11657831269294E-5 24 1.8349734938078818E-4 6.11657831269294E-5 7.339893975231527E-4 0.021102195178790643 6.11657831269294E-5 25 1.8349734938078818E-4 6.11657831269294E-5 7.339893975231527E-4 0.028013928672133665 6.11657831269294E-5 26 1.8349734938078818E-4 6.11657831269294E-5 7.339893975231527E-4 0.04079757734566191 6.11657831269294E-5 27 1.8349734938078818E-4 6.11657831269294E-5 7.339893975231527E-4 0.13701135420432184 6.11657831269294E-5 28 1.8349734938078818E-4 6.11657831269294E-5 8.563209637770116E-4 0.23683391226747064 6.11657831269294E-5 29 1.8349734938078818E-4 6.11657831269294E-5 8.563209637770116E-4 0.34674882454656275 6.11657831269294E-5 30 1.8349734938078818E-4 6.11657831269294E-5 8.563209637770116E-4 0.5531221768168225 6.11657831269294E-5 31 1.8349734938078818E-4 6.11657831269294E-5 8.563209637770116E-4 0.852528685223142 6.11657831269294E-5 >>END_MODULE >>Kmer Content fail #Sequence Count PValue Obs/Exp Max Max Obs/Exp Position GGTATCA 4775 0.0 31.188482 1 CCGTTAT 25 0.0054970146 29.599998 23 CGTGTCT 190 0.0 20.447369 35 GTATTGG 345 0.0 19.304348 1 TTGGACC 785 0.0 19.089172 4 ATTGGAC 385 0.0 18.74026 3 ACGCATA 50 0.0070361234 18.499998 7 GTATCAA 8130 0.0 18.40898 2 GGACCCT 775 0.0 18.141937 6 ACCGTGA 105 4.800331E-7 17.619047 8 ATCTCGT 130 1.3942554E-8 17.076923 37 TGGACCC 850 0.0 16.758823 5 TCGTGTC 235 0.0 16.531916 34 GACCCTC 860 0.0 16.348839 7 CGATAAG 70 0.0025931222 15.857142 23 TTTTTAC 1300 0.0 15.653846 1 GTCCTAA 145 5.349466E-8 15.310345 1 CGAACCT 365 0.0 15.20548 32 CGTAGAG 160 1.0972144E-8 15.03125 28 GCTCGAC 75 0.0041053924 14.8 29 >>END_MODULE